ViewGene

Locus Name:
GeneID:
Location:

GeneID:5717
TrivialName: PA14_45160
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_45160
PAO1 Ortholog Locus:
Sequence Length:1590
Protein Length:529
Start: 4028973
Stop: 4027384
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGCGGCCGCCAATCCGGCGGGACCGCTGCCGACGATGGCGACGTCGACCTGTTCAGTGATGCTCATGGCA
ACTCCCGGTGGCGAGGGGCTGGGCGAGGCGGCCGGCGCTCAGCTCGGCGACCCGCGCGTTGCAGTAGAAACC
CTGGCAGCGTCCCATGCAGGCGCGGGTGCGACGCTTCAGGCCGCCGAAGTCGCCGGCTGGCAGCGGGCCTTC
CAGGGCGGCGAGGATTTCCCGGCGGGTGACCATCTCGCAGTGGCAGACGATCTCGTCGTAGCCGGGACGCTG
CCAGTCGCGCGGCAGGTGTTCGGCGAGGTTCGGTACCTGCGGCCAGAGCGGCTCGCGAACCGCTTCGTGGAA
GCGCCCACCCTGGTAGAGACGATAGACGTGGCGTGCGATGCCCAGCGCCGCGGTGAGACCGGTGGAACGGAT
GCCGCCGACACTGATCCAGTTGCGTCCGTCGACCTGGCGGATGCGGTATTCCTTCTTTTCGCTGGCTGGCCG
CAACCCGGCGTAGGTGGCGGTGACCGGCATGCCGCGCAGGCCGGGGATCCGCTCGACGGCGGCGTCGATCAG
TCGCTGCAGGGTGTCGCTGTCGACCCGTGCCTGTTCGCGGTCGTCCTGTTCCTCGGCGGTGGGGCCGGCGAG
CAGGTTGCCGAAGACAGTACGGGTGAATACCACGCCTTTGGTCCGCTCGTTGGGTACCGGCAGCAGGATGTG
CCGCAGCAGCGCCGCGGCGGCCTTGTCGAAGACCACGAACTGGCCCTTGCGCGGATGGATGGCGAAGCTCGC
CGCGCCGAGCAGGCGCTGTTCCAGTTGGTCACCGAAGAGTCCGGCGCAGTTGATTACCTGGCGCGCGCGCAG
ATCGCCGCGGCGGGTATGCAACAGCCATTCGCCGCCGTCGAAGGCGCCGTCCAGCACCTCGACGTCGAAACA
GGCCTCGGCGCCATGGGCCTGCGCCTGTTGCAGATAGGCGAGCGGCGCGGACCAGGGGTCGATCAGATGCTC
ACCGGGGACCCGCACCGCACCGAGCACATTGCCGGCCAACTGCGGCTCCAGCGCCAGGACCTCGTCGCGACC
GATCTGGCGGACGTCATCGACACCGTTGCCGTGGGCCTGCTCGACGATGGCCGGCAGGCGCGCCAGATCCTC
GTCGCTCCATGCCGCCACCAGGGCGCCGGTTTCCAGCAGCGGCAGGTTGAGGCGCGCATGGATGTCGCGGTA
TTCGCGATAGCCCTCCTGCATGCAGGCCAGTTCGATGCTGCCGGGCGGCGCGTCGAAACCGGTATGGAGGAT
CGCGCTGTTGCCCTTGCTGGCACCGGAGAGGATGTCGGTGCTTTTTTCCAGCAGGACCACCCGCGCACCTTC
CAGGGCGAAGCGGCGGGCCATGGCGCAACCCACCACGCCAGCGCCGATCACTGCAACGTCGAAGATCGCGGT
CTTTGTCGCAAGCGGCTCAGTCATCGTTTCTGCCTGTTTCTTTTGGTATCAGTTTGCTTTTTGACCGTAACA
CTGATTTTTCACACAGAATTTTATGTGAAATCTGTTGTTTTAATGTGGCAACTGAAAGAGAAACAGTCAATC
GATTAA
Translation:
MAAANPAGPLPTMATSTCSVMLMATPGGEGLGEAAGAQLGDPRVAVETLAASHAGAGATLQAAEVAGWQRAF
QGGEDFPAGDHLAVADDLVVAGTLPVARQVFGEVRYLRPERLANRFVEAPTLVETIDVACDAQRRGETGGTD
AADTDPVASVDLADAVFLLFAGWPQPGVGGGDRHAAQAGDPLDGGVDQSLQGVAVDPCLFAVVLFLGGGAGE
QVAEDSTGEYHAFGPLVGYRQQDVPQQRRGGLVEDHELALARMDGEARRAEQALFQLVTEESGAVDYLARAQ
IAAAGMQQPFAAVEGAVQHLDVETGLGAMGLRLLQIGERRGPGVDQMLTGDPHRTEHIAGQLRLQRQDLVAT
DLADVIDTVAVGLLDDGRQARQILVAPCRHQGAGFQQRQVEARMDVAVFAIALLHAGQFDAAGRRVETGMED
RAVALAGTGEDVGAFFQQDHPRTFQGEAAGHGATHHASADHCNVEDRGLCRKRLSHRFCLFLLVSVCFLTVT
LIFHTEFYVKSVVLMWQLKEKQSID*
AnnotationID:5719GeneID:5717
AnnotatorUID: diggins
Modification Date/Time: 2005-01-23 15:03:26
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
no data found via CDD Search
Genomic Context:
Comment:
ReferenceID:11378
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28565
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48719How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 924936Stop: 926525
Length: 1590
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCGGCCGCCAATCCGGCGGGACCGCTGCCGACGATGGCGACGTCGACCTGTTCAGTGATGCTCATGGCA
ACTCCCGGTGGCGAGGGGCTGGGCGAGGCGGCCGGCGCTCAGCTCGGCGACCCGCGCGTTGCAGTAGAAACC
CTGGCAGCGTCCCATGCAGGCGCGGGTGCGACGCTTCAGGCCGCCGAAGTCGCCGGCTGGCAGCGGGCCTTC
CAGGGCGGCGAGGATTTCCCGGCGGGTGACCATCTCGCAGTGGCAGACGATCTCGTCGTAGCCGGGACGCTG
CCAGTCGCGCGGCAGGTGTTCGGCGAGGTTCGGTACCTGCGGCCAGAGCGGCTCGCGAACCGCTTCGTGGAA
GCGCCCACCCTGGTAGAGACGATAGACGTGGCGTGCGATGCCCAGCGCCGCGGTGAGACCGGTGGAACGGAT
GCCGCCGACACTGATCCAGTTGCGTCCGTCGACCTGGCGGATGCGGTATTCCTTCTTTTCGCTGGCTGGCCG
CAACCCGGCGTAGGTGGCGGTGACCGGCATGCCGCGCAGGCCGGGGATCCGCTCGACGGCGGCGTCGATCAG
TCGCTGCAGGGTGTCGCTGTCGACCCGTGCCTGTTCGCGGTCGTCCTGTTCCTCGGCGGTGGGGCCGGCGAG
CAGGTTGCCGAAGACAGTACGGGTGAATACCACGCCTTTGGTCCGCTCGTTGGGTACCGGCAGCAGGATGTG
CCGCAGCAGCGCCGCGGCGGCCTTGTCGAAGACCACGAACTGGCCCTTGCGCGGATGGATGGCGAAGCTCGC
CGCGCCGAGCAGGCGCTGTTCCAGTTGGTCACCGAAGAGTCCGGCGCAGTTGATTACCTGGCGCGCGCGCAG
ATCGCCGCGGCGGGTATGCAACAGCCATTCGCCGCCGTCGAAGGCGCCGTCCAGCACCTCGACGTCGAAACA
GGCCTCGGCGCCATGGGCCTGCGCCTGTTGCAGATAGGCGAGCGGCGCGGACCAGGGGTCGATCAGATGCTC
ACCGGGGACCCGCACCGCACCGAGCACATTGCCGGCCAACTGCGGCTCCAGCGCCAGGACCTCGTCGCGACC
GATCTGGCGGACGTCATCGACACCGTTGCCGTGGGCCTGCTCGACGATGGCCGGCAGGCGCGCCAGATCCTC
GTCGCTCCATGCCGCCACCAGGGCGCCGGTTTCCAGCAGCGGCAGGTTGAGGCGCGCATGGATGTCGCGGTA
TTCGCGATAGCCCTCCTGCATGCAGGCCAGTTCGATGCTGCCGGGCGGCGCGTCGAAACCGGTATGGAGGAT
CGCGCTGTTGCCCTTGCTGGCACCGGAGAGGATGTCGGTGCTTTTTTCCAGCAGGACCACCCGCGCACCTTC
CAGGGCGAAGCGGCGGGCCATGGCGCAACCCACCACGCCAGCGCCGATCACTGCAACGTCGAAGATCGCGGT
CTTTGTCGCAAGCGGCTCAGTCATCGTTTCTGCCTGTTTCTTTTGGTATCAGTTTGCTTTTTGACCGTAACA
CTGATTTTTCACACAGAATTTTATGTGAAATCTGTTGTTTTAATGTGGCAACTGAAAGAGAAACAGTCAATC
GATTAA