ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5716

TrivialName: PA14_45200

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_45200

PAO1 Ortholog Locus:

Sequence Length: 1290

Protein Length: 429

Start: 4031438

Stop: 4032727

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK20156.1| (AY027524) hypothetical protein [Frankia sp. CpI1] Identities = 83/307 (27%), Positives = 105/307 (34%), Gaps = 16/307 (5%)

Sequence:

TTGCCGCGCGGGGCCTCGGCTACGAGCTGGCGGAGCCGCGCAACACCCGCACGGAGTTCCAGCCGCGGGTCG
ACGCCGGCACCGCCCGGCGCTGGCAGGTGCGTTTCAGCGAAGCGGTGGCGCGCACCCGCGGCTGGCGCTGAG
CCGCTTTCAGCGTCCCGGCCAGCCGGTCTCGCGCAGCGCCGTCAGGAGCGTCTCCCCCTTCAGCGCGGGCAC
CAGCCGGCCGTCCTCGGTGCGCATGTCCTCGCCGGCCAGCAGCACGTTGACGATGGCTTCTTCCACCGCCTC
CGCCGCCGCGGCGAACAACGGCGAGATGTGGTCGTTGTTGAGCATCCGCAGCGGCGTGCTCTGCGGCAGGTC
CTTGCGCGCATAGTCGGCTGGCGGCAGGTCCTGGTTGCCGGTGGCGAAGGCGAGGAACACGTCGCCGCTGGA
GTCCTCGGTGCCACCGCCGGTGCGAGCGATGCCGATCGAGGCGCGCTGCGCCAGGCGCTGGCACTGGTGCGG
CAGCAGCGGCGCGTCGGTGGCCAGGATCACCACGATGGAGCCCATGCCCGGGGTGCCTTCCTCGCTGAACGG
CGAGGGGATGTCGCCCAGCCGGCGGCCGACCGGATAGCCATCGACCCGCAGCTCGCGACGCTGGCCGTGGTT
GGCCTGGACCAGCGCGCCCACCGTCCAGCCGCCCTGCTCCGCCGGCAGCCGCCGCGATGCGCTACCGATGCC
ACCCTTGAACTCGTGGCAGATCATCCCGGTGCCGCCGCCCACCGAACCTTCGCGGACCGGTCCGGACTCGGC
GCAGGCCAGCGCCTCGCCGACCTGGCGGGCGCCGACGTGCTGGCCCCAGATATCGTTGAGCAGGCCGTCGAA
GGTCTCCATCACCACCGGCATGCACCAGTACAGCCCGCTGTCGCCGAGTTCGGCGCGCTCCTCGGCGATCAG
CGCGTCGCGCACCGCGCCGACGCTGTGGGTATTGGTGATGGCGATCGGGGTGGTCAGCAGGCCGGCTTCGCG
GATCCACTCCAGGCCCGTGGCGTCGCCGTTGCCGTTGAGCACATGGCAGCCGGCGAAGCAGGGTTGCAGGCG
CGCCGCACCGGCGCGCGGCTGGACCAGGGTGACGCCGGTGCGAACCTGCCTGCCGTCGATCCGCTGGTTCAG
GGTGCTGTGGCCGACGCGCACGCCGGGAACGTCGGTGATCGCGTTGAACGGGCCGGGAGTGCCCAGGCCGAG
GGTGATGCCAAGTTGTCGAGCGCGCATGCGGACTCCTGTTTCAAAGCTTCTGGAACGCCGGACTGA

Translation:

MPRGASATSWRSRATPARSSSRGSTPAPPGAGRCVSAKRWRAPAAGAEPLSASRPAGLAQRRQERLPLQRGH
QPAVLGAHVLAGQQHVDDGFFHRLRRRGEQRRDVVVVEHPQRRALRQVLARIVGWRQVLVAGGEGEEHVAAG
VLGATAGASDADRGALRQALALVRQQRRVGGQDHHDGAHARGAFLAERRGDVAQPAADRIAIDPQLATLAVV
GLDQRAHRPAALLRRQPPRCATDATLELVADHPGAAAHRTFADRSGLGAGQRLADLAGADVLAPDIVEQAVE
GLHHHRHAPVQPAVAEFGALLGDQRVAHRADAVGIGDGDRGGQQAGFADPLQARGVAVAVEHMAAGEAGLQA
RRTGARLDQGDAGANLPAVDPLVQGAVADAHAGNVGDRVERAGSAQAEGDAKLSSAHADSCFKASGTPD*

AnnotationID:5718 GeneID:5716

AnnotatorUID: diggins

Modification Date/Time: 2005-02-24 18:06:39

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15589

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28563