ViewGene

Locus Name:
GeneID:
Location:

GeneID:5713
TrivialName: PA14_45270
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_45270
PAO1 Ortholog Locus:
Sequence Length:1413
Protein Length:470
Start: 4035518
Stop: 4036930
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGTCGTTATGGCCGGGCCGCCTGGGGCTGGTCCGGGCCGTCGATGGTCAGCGCTTGCGCCGACGACTGGGC
GGTAGACAACGGTTTGCCGCGTCCGATCCATTCGCCGGAGATGGCGTTGCCGGCGCGGGATACCCGCGCGAC
CAGCTCGACCTGCGGGAATCCGCTGAGCTTGAGCTGCGGCATCATGGCGTCGGCATCGCTCAGGCTGACCTC
GGCCGGCAGGTCGGCGACGGTCAGGCGCTTCACTGCCAACGGCATCGGCGGGCCGCCGACGGCGCGGGCGAA
GACGAACACGCTGTCGTCGGCCTTGACCTGGCCCTTCACCGCGTCGCTGATATCCACCTTCACCGTCAGGGT
CACCCCGGCGGCAGCGGGCGCGGCCGGCGCCGGCGGGGTCTGCCCGGCCTCGGTCATGCGCTCGCGGGCGCG
CTGGATGCCGCCCTGGATCGCCGAGCGTGCCGGGTCCTCGTTCGGCAACACCGACACCAGGCGCTCCCAGAA
GCCGATGGCGTCGGCGTAGCGCTGCTCTTCGAAGGCGGCGATGCCGAGCAGGCCAAGGGTGGTCACTTCGGC
CGGGTCGCCCTTCAGCGCCTCGTCGGCCAAGGCCTTGATCTGCGCGGTCATTTTCTTGCCACCGGAGAAATA
CAGTGCCTGCGCCCACTGGCCGAGCAGTTCCGGCTGCCGCCCGCTGAGTTCGGCGGAGCGTTCGAAGGCCCG
CGCCGCATCGGCGCCGCGTTCCTGGGTCATGTAGGTGCGACCGAGGAAGTACCAGCCCTGGGCGGAATCCGG
CTGGGCCTGTACCGCGCGCTCCAGGCGCGCGGTCATCTCTTCCATGGAGTGCGGTGCCTGGGCGAATTCGCG
GGCCAGCTCGACCTTGTCGCTGGCGCCCCAATGCAGGTACAGGCCGAGCGCGACCAACGGCACCAGCAGCGC
CGCGACCAGCGGGATCGCCCGGCCCAGGCGCGAGCTACGCTCCTCGCCGCTGCCCTCGGTGTCGGCGAGCAG
TTCGCGGGCAGCCTCGGCGCGGCCATTCTCCAGTTGCTCGGCGGTCAGCGTGCCGGCGGCCTGCTGGCCGGC
CAGCTCGGCGATCCGCTCCTGATAAAGCGCGACGTTCAGGGCGGTACGGTCTTCCTCGGCCTGGGCGCGACG
GCCACGCAGCAGCGGAATCAGCAGGAATGCCAGGGCCGCCAGCAGCAGCAGGCCGGCAGCGAGCCAGAAATC
GATCATTTGTCGTTCTTCAACAGGTTGGCGAGGCGCGCTTGCTCCTCGGCGGACAGGGTGGTTTGCACCTTG
GCGGCGGTGCGCCGGCGGCGCAGGACGATCACGCCGATCACCAGCACGCCGAACAGCAGCAAGGCGCCCGGA
CCGAACCAGAGCAGCCAGGTACGCTCGTTGACCGGCGGCTTGTAG
Translation:
MSLWPGRLGLVRAVDGQRLRRRLGGRQRFAASDPFAGDGVAGAGYPRDQLDLRESAELELRHHGVGIAQADL
GRQVGDGQALHCQRHRRAADGAGEDEHAVVGLDLALHRVADIHLHRQGHPGGSGRGRRRRGLPGLGHALAGA
LDAALDRRACRVLVRQHRHQALPEADGVGVALLFEGGDAEQAKGGHFGRVALQRLVGQGLDLRGHFLATGEI
QCLRPLAEQFRLPPAEFGGAFEGPRRIGAAFLGHVGATEEVPALGGIRLGLYRALQARGHLFHGVRCLGEFA
GQLDLVAGAPMQVQAERDQRHQQRRDQRDRPAQARATLLAAALGVGEQFAGSLGAAILQLLGGQRAGGLLAG
QLGDPLLIKRDVQGGTVFLGLGATATQQRNQQECQGRQQQQAGSEPEIDHLSFFNRLARRACSSADRVVCTL
AAVRRRRRTITPITSTPNSSKAPGPNQSSQVRSLTGGL*
AnnotationID:5715GeneID:5713
AnnotatorUID: diggins
Modification Date/Time: 2005-02-24 18:06:21
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits found above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15585
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28557
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48715How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 918391Stop: 916979
Length: 1413
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGTCGTTATGGCCGGGCCGCCTGGGGCTGGTCCGGGCCGTCGATGGTCAGCGCTTGCGCCGACGACTGGGC
GGTAGACAACGGTTTGCCGCGTCCGATCCATTCGCCGGAGATGGCGTTGCCGGCGCGGGATACCCGCGCGAC
CAGCTCGACCTGCGGGAATCCGCTGAGCTTGAGCTGCGGCATCATGGCGTCGGCATCGCTCAGGCTGACCTC
GGCCGGCAGGTCGGCGACGGTCAGGCGCTTCACTGCCAACGGCATCGGCGGGCCGCCGACGGCGCGGGCGAA
GACGAACACGCTGTCGTCGGCCTTGACCTGGCCCTTCACCGCGTCGCTGATATCCACCTTCACCGTCAGGGT
CACCCCGGCGGCAGCGGGCGCGGCCGGCGCCGGCGGGGTCTGCCCGGCCTCGGTCATGCGCTCGCGGGCGCG
CTGGATGCCGCCCTGGATCGCCGAGCGTGCCGGGTCCTCGTTCGGCAACACCGACACCAGGCGCTCCCAGAA
GCCGATGGCGTCGGCGTAGCGCTGCTCTTCGAAGGCGGCGATGCCGAGCAGGCCAAGGGTGGTCACTTCGGC
CGGGTCGCCCTTCAGCGCCTCGTCGGCCAAGGCCTTGATCTGCGCGGTCATTTTCTTGCCACCGGAGAAATA
CAGTGCCTGCGCCCACTGGCCGAGCAGTTCCGGCTGCCGCCCGCTGAGTTCGGCGGAGCGTTCGAAGGCCCG
CGCCGCATCGGCGCCGCGTTCCTGGGTCATGTAGGTGCGACCGAGGAAGTACCAGCCCTGGGCGGAATCCGG
CTGGGCCTGTACCGCGCGCTCCAGGCGCGCGGTCATCTCTTCCATGGAGTGCGGTGCCTGGGCGAATTCGCG
GGCCAGCTCGACCTTGTCGCTGGCGCCCCAATGCAGGTACAGGCCGAGCGCGACCAACGGCACCAGCAGCGC
CGCGACCAGCGGGATCGCCCGGCCCAGGCGCGAGCTACGCTCCTCGCCGCTGCCCTCGGTGTCGGCGAGCAG
TTCGCGGGCAGCCTCGGCGCGGCCATTCTCCAGTTGCTCGGCGGTCAGCGTGCCGGCGGCCTGCTGGCCGGC
CAGCTCGGCGATCCGCTCCTGATAAAGCGCGACGTTCAGGGCGGTACGGTCTTCCTCGGCCTGGGCGCGACG
GCCACGCAGCAGCGGAATCAGCAGGAATGCCAGGGCCGCCAGCAGCAGCAGGCCGGCAGCGAGCCAGAAATC
GATCATTTGTCGTTCTTCAACAGGTTGGCGAGGCGCGCTTGCTCCTCGGCGGACAGGGTGGTTTGCACCTTG
GCGGCGGTGCGCCGGCGGCGCAGGACGATCACGCCGATCACCAGCACGCCGAACAGCAGCAAGGCGCCCGGA
CCGAACCAGAGCAGCCAGGTACGCTCGTTGACCGGCGGCTTGTAG