ViewGene
Locus Name:
GeneID:
Location:

GeneID:5709
TrivialName: PA14_45420
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_45420
PAO1 Ortholog Locus:
Sequence Length:681
Protein Length:226
Start: 4045220
Stop: 4044540
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCGCTATCTATCGGTTCCTTTCGCCGCTGTCGGCCCGTTGCGAGTCGGCGTCGCGTCTACGCCAATAGTC
GTCCTCATCGGTCTGGCGTTCGCTCAGCCGTTTCCCGCTGCGTGCGTCGAACTCCAGGATCCAGAAGGTGGC
AGGCTCCTTCTGGTCGTCGCGAAGGTAGCTTCGGTAGGTGAAGCGGTCCCTATCCTGAAGCAGGACCACGCG
GTCGATGGTTCCTTCGTGATGGCGTACCTTGGCTTGCCGATTGATGCGGAACTCCGGAGTCAGCCGGTGCCG
ATCGATGATTGCATCCTTTTCCTCGTCGCCGAGGATGGCCGGGGCGGCCTGGACATGGCTGGCGATAAGCAG
CAGGGCGGCGAGGAGGAAGGGGCTTGGCGAGGGCATGGGCGGCCTGGGAAGTGGCAGGTGGACTGTGCTGGG
ACCGCTCTCGCGGATTCCGGTTCCGGCGCTTCGGTTTCGACGTGTGGCGGGTCCGCTCAGTCGCCGGGACCG
CCGAGCAGCAGCATCTGGTTGCCATCCTCGGCGTCCGGCGCGAATCCCTCGGGACACTTGCCTTTCAGGTGC
CAGGCGAAGGCGATGATCTCGGCGATGGTGCGATACAGCGCTTCCGGAATGGCGTCGCCGAGTTCCAGGCGG
GCGAGCAGGCGGACCAGCTCGGCGTTCTCGTAG
Translation:
MRYLSVPFAAVGPLRVGVASTPIVVLIGLAFAQPFPAACVELQDPEGGRLLLVVAKVASVGEAVPILKQDHA
VDGSFVMAYLGLPIDAELRSQPVPIDDCILFLVAEDGRGGLDMAGDKQQGGEEEGAWRGHGRPGKWQVDCAG
TALADSGSGASVSTCGGSAQSPGPPSSSIWLPSSASGANPSGHLPFRCQAKAMISAMVRYSASGMASPSSRR
ASRRTSSAFS*
AnnotationID:5711GeneID:5709
AnnotatorUID: diggins
Modification Date/Time: 2005-02-24 13:01:07
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:15580




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:28549




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48711How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 908689Stop: 909369

          
Length: 681


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCGCTATCTATCGGTTCCTTTCGCCGCTGTCGGCCCGTTGCGAGTCGGCGTCGCGTCTACGCCAATAGTC 
GTCCTCATCGGTCTGGCGTTCGCTCAGCCGTTTCCCGCTGCGTGCGTCGAACTCCAGGATCCAGAAGGTGGC 
AGGCTCCTTCTGGTCGTCGCGAAGGTAGCTTCGGTAGGTGAAGCGGTCCCTATCCTGAAGCAGGACCACGCG 
GTCGATGGTTCCTTCGTGATGGCGTACCTTGGCTTGCCGATTGATGCGGAACTCCGGAGTCAGCCGGTGCCG 
ATCGATGATTGCATCCTTTTCCTCGTCGCCGAGGATGGCCGGGGCGGCCTGGACATGGCTGGCGATAAGCAG 
CAGGGCGGCGAGGAGGAAGGGGCTTGGCGAGGGCATGGGCGGCCTGGGAAGTGGCAGGTGGACTGTGCTGGG 
ACCGCTCTCGCGGATTCCGGTTCCGGCGCTTCGGTTTCGACGTGTGGCGGGTCCGCTCAGTCGCCGGGACCG 
CCGAGCAGCAGCATCTGGTTGCCATCCTCGGCGTCCGGCGCGAATCCCTCGGGACACTTGCCTTTCAGGTGC 
CAGGCGAAGGCGATGATCTCGGCGATGGTGCGATACAGCGCTTCCGGAATGGCGTCGCCGAGTTCCAGGCGG 
GCGAGCAGGCGGACCAGCTCGGCGTTCTCGTAG