ViewGene

Locus Name:
GeneID:
Location:

GeneID:5708
TrivialName: PA14_45490
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_45490
PAO1 Ortholog Locus:
Sequence Length:1674
Protein Length:557
Start: 4049525
Stop: 4051198
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK24305.1| (AE005903) hypothetical protein [Caulobacter crescentus CB15]
Identities = 54/184 (29%), Positives = 73/184 (39%), Gaps = 25/184 (13%)
Sequence:
TTGCAGGCGGCGCAATTCACGGCGCAGCCACAGGCACGCCGCCGCCAGGCCGAGGCAGGCGGCGAGCGCCAG
TGCCAGCGCGACGACCTCCATCTCAGCAGGCCCTCGTGTCGGTCGAACGCATCAGATGCTGCCCAGCTCCGA
CCATTCTTCCTCGGTCATCATCTTGTCCAGCTCGACCAGGATCAGCAGCTCGCCGTTCTTGTTGCAGACGCC
CTGGATGAACTTGGCCGATTCTTCGTTACCGACGTTCGGCGCGGTCTCGATTTCCGACTGCTTCAGGTAGAC
CACCTCGGCGACGCTGTCGACCAGGATGCCGACCACCTGCTTGTCCGCCTCGATGATGACGATCCGCGTGTT
GTCGCTGACCGGCGCAGGGTCCAGGCCGAAGCGCTGCCGGGTGTCGATCACCGTGACCACGTTGCCGCGCAG
GTTGATGATGCCCAGCACGTAGCTCGGCGCGCCCGGCACCGGGGCGATCTCGGTGTAGCGCAGCACCTCCTG
GACCTGCATCACGTTGATGCCGTAGCTCTCGTTGTCCAGGCGGAAGGTGACCCACTGCAGGATCGGATCTTC
GGCGCTTTGCGCGGTGGCTTTGCTCATTCCCCTAACCTCTCGAAAACCGCCGCAAGCGGCGGAAGCTGTCTA
TCAATGGTCGCCGTGCAGGCGCTTGACGGCGCCGCTGGCGATCAGTTCGGCGAGCGCCGCCACATCCAGCAG
CGCACACATGTGTTCGATGACCGTGCCGGCCAACCAGGGCCGCTGGCTACGCTGGCTGCGCCATTTCACCTC
GGCCGGGTCGAGGCGGATCGAGCGGCTCACCTGGTGCACCGCCAGCCCCCACTCGTAGCCCTGGACCGAGAT
CACGTACTTGAGGCCGTCGCGATAGTCGTCGCGGTAGCGTTCGGGCATCACCCAGCGTGCGGTGTCCAGCAC
CTTCAGGTTGCCCGCCTGCGACGGCAGGATGCCGAGGAACCAGTCGGGCTGGCCGAACAACGGGGTCAGTTC
CTGGTTCTCCAGCGGATAGATCGAGCCGAGGCACACCAGCGGCACCGCCAGGGTCAGCCCAGCGACGTCGAA
CAGCAGGCACTCGAAGGGCTCCGCCGCCCAGGCCGGACGACCGTCGTCGAGCAGCGGCAGGTCGAGCAGCGC
CGGCTCGCTGGCGCTCGCCGGGGCGCTCGGCACGCGCAGTTCGATGACCTCGTGGGGCCGTGGCTCGACCGG
CAGCTCGCGCAACGTCGTCGGTTCGTCGAGCAGGGCCGCCGGCGCCGGCGGAACCAGGCGCGCATCGCGGAC
CTGCTCCTCGAGCACCGCGGCCTCGAACTCGTCGAACCCGTGGTCGACCGGCAGCGTTTCCAGCGTCGGGGC
CGGTGTCGCCACTTCGGCGACCGCCAGCGCCACAGGCTTCAACGGCGCGGGCGCAGGCGCTGGCGGCGTCTC
GACGGGAGGTTCCAGGTCCTCGAAAGTGGCCTCCTGGAGCAACGCATCCAGGTAGGACTGCAAGGCCAGTTG
CGAACGGGTGGCGGTGGCGGCGCTCATGTGGGTATTCCGCGACAGGGGTCTACAACGGTTATCGGCCGCACT
CCGGTGCGGCTTGAATGCGCCTGTCGGCGCGGCGACCGGCGCGCCATCAGGCCACCCGGGTGGCCGGCTGCT
GCGCCAGCAGATGCTTGA
Translation:
MQAAQFTAQPQARRRQAEAGGERQCQRDDLHLSRPSCRSNASDAAQLRPFFLGHHLVQLDQDQQLAVLVADA
LDELGRFFVTDVRRGLDFRLLQVDHLGDAVDQDADHLLVRLDDDDPRVVADRRRVQAEALPGVDHRDHVAAQ
VDDAQHVARRARHRGDLGVAQHLLDLHHVDAVALVVQAEGDPLQDRIFGALRGGFAHSPNLSKTAASGGSCL
SMVAVQALDGAAGDQFGERRHIQQRTHVFDDRAGQPGPLATLAAPFHLGRVEADRAAHLVHRQPPLVALDRD
HVLEAVAIVVAVAFGHHPACGVQHLQVARLRRQDAEEPVGLAEQRGQFLVLQRIDRAEAHQRHRQGQPSDVE
QQALEGLRRPGRTTVVEQRQVEQRRLAGARRGARHAQFDDLVGPWLDRQLAQRRRFVEQGRRRRRNQARIAD
LLLEHRGLELVEPVVDRQRFQRRGRCRHFGDRQRHRLQRRGRRRWRRLDGRFQVLESGLLEQRIQVGLQGQL
RTGGGGGAHVGIPRQGSTTVIGRTPVRLECACRRGDRRAIRPPGWPAAAPADA*
AnnotationID:5710GeneID:5708
AnnotatorUID: diggins
Modification Date/Time: 2005-02-24 13:01:59
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15579
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28547
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48710How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 904384Stop: 902711
Length: 1674
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCAGGCGGCGCAATTCACGGCGCAGCCACAGGCACGCCGCCGCCAGGCCGAGGCAGGCGGCGAGCGCCAG
TGCCAGCGCGACGACCTCCATCTCAGCAGGCCCTCGTGTCGGTCGAACGCATCAGATGCTGCCCAGCTCCGA
CCATTCTTCCTCGGTCATCATCTTGTCCAGCTCGACCAGGATCAGCAGCTCGCCGTTCTTGTTGCAGACGCC
CTGGATGAACTTGGCCGATTCTTCGTTACCGACGTTCGGCGCGGTCTCGATTTCCGACTGCTTCAGGTAGAC
CACCTCGGCGACGCTGTCGACCAGGATGCCGACCACCTGCTTGTCCGCCTCGATGATGACGATCCGCGTGTT
GTCGCTGACCGGCGCAGGGTCCAGGCCGAAGCGCTGCCGGGTGTCGATCACCGTGACCACGTTGCCGCGCAG
GTTGATGATGCCCAGCACGTAGCTCGGCGCGCCCGGCACCGGGGCGATCTCGGTGTAGCGCAGCACCTCCTG
GACCTGCATCACGTTGATGCCGTAGCTCTCGTTGTCCAGGCGGAAGGTGACCCACTGCAGGATCGGATCTTC
GGCGCTTTGCGCGGTGGCTTTGCTCATTCCCCTAACCTCTCGAAAACCGCCGCAAGCGGCGGAAGCTGTCTA
TCAATGGTCGCCGTGCAGGCGCTTGACGGCGCCGCTGGCGATCAGTTCGGCGAGCGCCGCCACATCCAGCAG
CGCACACATGTGTTCGATGACCGTGCCGGCCAACCAGGGCCGCTGGCTACGCTGGCTGCGCCATTTCACCTC
GGCCGGGTCGAGGCGGATCGAGCGGCTCACCTGGTGCACCGCCAGCCCCCACTCGTAGCCCTGGACCGAGAT
CACGTACTTGAGGCCGTCGCGATAGTCGTCGCGGTAGCGTTCGGGCATCACCCAGCGTGCGGTGTCCAGCAC
CTTCAGGTTGCCCGCCTGCGACGGCAGGATGCCGAGGAACCAGTCGGGCTGGCCGAACAACGGGGTCAGTTC
CTGGTTCTCCAGCGGATAGATCGAGCCGAGGCACACCAGCGGCACCGCCAGGGTCAGCCCAGCGACGTCGAA
CAGCAGGCACTCGAAGGGCTCCGCCGCCCAGGCCGGACGACCGTCGTCGAGCAGCGGCAGGTCGAGCAGCGC
CGGCTCGCTGGCGCTCGCCGGGGCGCTCGGCACGCGCAGTTCGATGACCTCGTGGGGCCGTGGCTCGACCGG
CAGCTCGCGCAACGTCGTCGGTTCGTCGAGCAGGGCCGCCGGCGCCGGCGGAACCAGGCGCGCATCGCGGAC
CTGCTCCTCGAGCACCGCGGCCTCGAACTCGTCGAACCCGTGGTCGACCGGCAGCGTTTCCAGCGTCGGGGC
CGGTGTCGCCACTTCGGCGACCGCCAGCGCCACAGGCTTCAACGGCGCGGGCGCAGGCGCTGGCGGCGTCTC
GACGGGAGGTTCCAGGTCCTCGAAAGTGGCCTCCTGGAGCAACGCATCCAGGTAGGACTGCAAGGCCAGTTG
CGAACGGGTGGCGGTGGCGGCGCTCATGTGGGTATTCCGCGACAGGGGTCTACAACGGTTATCGGCCGCACT
CCGGTGCGGCTTGAATGCGCCTGTCGGCGCGGCGACCGGCGCGCCATCAGGCCACCCGGGTGGCCGGCTGCT
GCGCCAGCAGATGCTTGA