ViewGene

Locus Name:
GeneID:
Location:

GeneID:5707
TrivialName: PA14_45530
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_45530
PAO1 Ortholog Locus:
Sequence Length:1923
Protein Length:640
Start: 4051921
Stop: 4053843
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 94/348 (27%), Positives = 136/348 (39%), Gaps = 68/348 (19%)
Sequence:
TTGGCGACTGCCCAGACTTTCATTGCTCTACTCTTCCTGGCATGGGTCCACCCGGTTGGGGCCGCACTACTG
GCCAGTTCGGCCCCGGCGCCCGTACGCAAACCATGTTTCGCGCGCTCATGGCGAAGGCGACGGGGAATTGAC
GGTTGCCGGCGCGGGCGCCGGCGTACCGCCAGTATCTGCAGCTTGCGTGCCAGCTGCCGAGCCTGCGTGGCG
GAGCGCCGAATCCGGCTGCGCCTTGCCGCTGCCGACCCCGCTGACGCTGCGCCGTACCTCCAGGTTGCGCGA
GATCACCAGCACCACCCGGCGGTTCTTCGCCCGCCCTTCGGCGCTGGCATTGTCTGCCACCGGTTGAAATTC
ACCATAGCCCACCGCAGCCATCCGCGACGGCTCGACCCCATCGTTGCCGAGCAGGCGGACGATGCTCGCCGC
CCGCGCCGCCGACAGTTCCCAGTTGGTGGGATAGCGCGGGCTATGGATCGGCACGTCGTCGGTGAAGCCCTC
GACATGGATCGGGTTCTTGTAGGGCGCCAGGATCTTGGCGACCTTCTCGACGATATCGAAGGCGGCATCGTT
GGGCAGCGCATCGCCGCTGGGAAACAGCAGGCTGGAATTGAGAGTGATCTCGATCCACAGCTCGTTGCCGCG
CACGCTCAACTGGTCGGAGGCGATCAAGTCGCCGAAGGCATCGCGCACGCTGTCGGCGATCCGCTCCAGCGA
GTCGGCGCTGGCCGCGTTGTCGCTGGGCTGCTCCTCGACGCTGGTGCGCTCCGGCTCGGTGGTGCGCGGCCG
CTCGTCGCCGATGGGAATCGGCTTCAACGAGCGGTCGGGCTGGTTGAACACCCCGGTGAGGGTCTCCGAGAG
GATCTTGTACTTGCCCTCGTTGATCGAGGAAATCGAATACATCACCACGAAGAAGGCGAACAACAGGGTGAT
GAAATCGGCATAGGAAACCAGCCAGCGTTCGTGGTTCTCGTGTTCCTCCTGGTGGCGACGGCGACGCTGCAT
GCTCGGCTCCGGTCAGTCCATGAAGCCTTGCAGCTTCAACTCGATGGAACGCGGGTTCTCGCCCTCGGCGAT
GGACAGCAGGCCCTCCAGGAGCATCTCGCGGTAGCGCGACTGGCGCAGCACCAGGGTTTTCAGCTTGTTGCC
GATCGGCAGCAGGAGCAGGTTGGCGAAGCCGACGCCATAGATGGTGGCGACGAAGGCCACGGCGATGCCGCT
GCCGAGCTGCGCCGGGTTGGCCAGGTTGCCCATCACATGGATCAGGCCCATTACCGCGCCGATGATGCCGAT
GGTCGGCGCATAGCCGCCCATGCTCTCGAACACCTTGGCGGCCTGCAGGTCGCGGCTTTCCTGGGTGAACAG
GTCGACCTCGAGGATGCTGCGGATGACTTCTGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCCTTGCGCGC
ATAGGGATCGGGCTCCGCGTCGGCGATGCTCTCCAGGCCGAGCAGGCCTTCCTTGCGCGCGGTCATGCTCCA
GGAGACGATCCGGTCGATTCCCCCGGAAAGATCCTCGCGCGGCGGGAAGAACACCCAGCCGAGCATGCCCAG
GCCGCGCTTGAGCACGTTCACCGGGGTCTGCAACAGCGCCGCGGCCAGGGTGCCGCCGATCACGATCAGCGC
CGCCGGACCGTTGAGCAGGGCCCCCGCGTGGCCGCCCTCGAGGAAGTTGCCGCCGACGATGGCGACGAACGC
CAGGATGATCCCGACCAGGCTGAGCACATCCATCAGCGCGTCCCCTCGGCTCGGCGAAGGCGCGCGCAGGTC
GTCACGTGGGTGGCCATCGAAGGCAGTCTCCTCATTCCTGCACGCACGCTTACTGGCACGCCTCGACCAGGT
GCCGGCCGATGTCGTCGAGCCCGTACACCGCGTCCGCCAGGTTGGCCTTGA
Translation:
MATAQTFIALLFLAWVHPVGAALLASSAPAPVRKPCFARSWRRRRGIDGCRRGRRRTASICSLRASCRACVA
ERRIRLRLAAADPADAAPYLQVARDHQHHPAVLRPPFGAGIVCHRLKFTIAHRSHPRRLDPIVAEQADDARR
PRRRQFPVGGIARAMDRHVVGEALDMDRVLVGRQDLGDLLDDIEGGIVGQRIAAGKQQAGIESDLDPQLVAA
HAQLVGGDQVAEGIAHAVGDPLQRVGAGRVVAGLLLDAGALRLGGARPLVADGNRLQRAVGLVEHPGEGLRE
DLVLALVDRGNRIHHHEEGEQQGDEIGIGNQPAFVVLVFLLVATATLHARLRSVHEALQLQLDGTRVLALGD
GQQALQEHLAVARLAQHQGFQLVADRQQEQVGEADAIDGGDEGHGDAAAELRRVGQVAHHMDQAHYRADDAD
GRRIAAHALEHLGGLQVAAFLGEQVDLEDAADDFWLGAVHQQLQALARIGIGLRVGDALQAEQAFLARGHAP
GDDPVDSPGKILARREEHPAEHAQAALEHVHRGLQQRRGQGAADHDQRRRTVEQGPRVAALEEVAADDGDER
QDDPDQAEHIHQRVPSARRRRAQVVTWVAIEGSLLIPARTLTGTPRPGAGRCRRARTPRPPGWP*
AnnotationID:5709GeneID:5707
AnnotatorUID: diggins
Modification Date/Time: 2005-02-24 13:01:44
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15577
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28545
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48709How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 901988Stop: 900066
Length: 1923
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGGCGACTGCCCAGACTTTCATTGCTCTACTCTTCCTGGCATGGGTCCACCCGGTTGGGGCCGCACTACTG
GCCAGTTCGGCCCCGGCGCCCGTACGCAAACCATGTTTCGCGCGCTCATGGCGAAGGCGACGGGGAATTGAC
GGTTGCCGGCGCGGGCGCCGGCGTACCGCCAGTATCTGCAGCTTGCGTGCCAGCTGCCGAGCCTGCGTGGCG
GAGCGCCGAATCCGGCTGCGCCTTGCCGCTGCCGACCCCGCTGACGCTGCGCCGTACCTCCAGGTTGCGCGA
GATCACCAGCACCACCCGGCGGTTCTTCGCCCGCCCTTCGGCGCTGGCATTGTCTGCCACCGGTTGAAATTC
ACCATAGCCCACCGCAGCCATCCGCGACGGCTCGACCCCATCGTTGCCGAGCAGGCGGACGATGCTCGCCGC
CCGCGCCGCCGACAGTTCCCAGTTGGTGGGATAGCGCGGGCTATGGATCGGCACGTCGTCGGTGAAGCCCTC
GACATGGATCGGGTTCTTGTAGGGCGCCAGGATCTTGGCGACCTTCTCGACGATATCGAAGGCGGCATCGTT
GGGCAGCGCATCGCCGCTGGGAAACAGCAGGCTGGAATTGAGAGTGATCTCGATCCACAGCTCGTTGCCGCG
CACGCTCAACTGGTCGGAGGCGATCAAGTCGCCGAAGGCATCGCGCACGCTGTCGGCGATCCGCTCCAGCGA
GTCGGCGCTGGCCGCGTTGTCGCTGGGCTGCTCCTCGACGCTGGTGCGCTCCGGCTCGGTGGTGCGCGGCCG
CTCGTCGCCGATGGGAATCGGCTTCAACGAGCGGTCGGGCTGGTTGAACACCCCGGTGAGGGTCTCCGAGAG
GATCTTGTACTTGCCCTCGTTGATCGAGGAAATCGAATACATCACCACGAAGAAGGCGAACAACAGGGTGAT
GAAATCGGCATAGGAAACCAGCCAGCGTTCGTGGTTCTCGTGTTCCTCCTGGTGGCGACGGCGACGCTGCAT
GCTCGGCTCCGGTCAGTCCATGAAGCCTTGCAGCTTCAACTCGATGGAACGCGGGTTCTCGCCCTCGGCGAT
GGACAGCAGGCCCTCCAGGAGCATCTCGCGGTAGCGCGACTGGCGCAGCACCAGGGTTTTCAGCTTGTTGCC
GATCGGCAGCAGGAGCAGGTTGGCGAAGCCGACGCCATAGATGGTGGCGACGAAGGCCACGGCGATGCCGCT
GCCGAGCTGCGCCGGGTTGGCCAGGTTGCCCATCACATGGATCAGGCCCATTACCGCGCCGATGATGCCGAT
GGTCGGCGCATAGCCGCCCATGCTCTCGAACACCTTGGCGGCCTGCAGGTCGCGGCTTTCCTGGGTGAACAG
GTCGACCTCGAGGATGCTGCGGATGACTTCTGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCCTTGCGCGC
ATAGGGATCGGGCTCCGCGTCGGCGATGCTCTCCAGGCCGAGCAGGCCTTCCTTGCGCGCGGTCATGCTCCA
GGAGACGATCCGGTCGATTCCCCCGGAAAGATCCTCGCGCGGCGGGAAGAACACCCAGCCGAGCATGCCCAG
GCCGCGCTTGAGCACGTTCACCGGGGTCTGCAACAGCGCCGCGGCCAGGGTGCCGCCGATCACGATCAGCGC
CGCCGGACCGTTGAGCAGGGCCCCCGCGTGGCCGCCCTCGAGGAAGTTGCCGCCGACGATGGCGACGAACGC
CAGGATGATCCCGACCAGGCTGAGCACATCCATCAGCGCGTCCCCTCGGCTCGGCGAAGGCGCGCGCAGGTC
GTCACGTGGGTGGCCATCGAAGGCAGTCTCCTCATTCCTGCACGCACGCTTACTGGCACGCCTCGACCAGGT
GCCGGCCGATGTCGTCGAGCCCGTACACCGCGTCCGCCAGGTTGGCCTTGA