ViewGene

Locus Name:
GeneID:
Location:

GeneID:5704
TrivialName: PA14_45600
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_45600
PAO1 Ortholog Locus:
Sequence Length:2238
Protein Length:745
Start: 4055071
Stop: 4057308
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGTCCCACCAACTGGTCGACGACGAAACCGATGCGCTGGGTGCCGACCGACAGGATCACCACGTGCCCCTC
GCCCTGCTCCTCGTGGGCCGCGCTCGGCACCAGCCAGCGCTTGAGGTAGAACAGCGGCAAGGCCTTGTCGCG
GACGATCACCACTTCCTGGCCATCCACGACATTGGTGCGCGACAGGTCAAGATGGAAGATTTCGTTGACGTT
GACCAGCGGGAAGGCGAACGCCTGGCTACCCAGCATCACCATAAGGGTAGGCATGATCGCCAGGGTCAGCGG
CACCTTGATGACGATCTTCGAGCCGGACCCCTTCTGCGAGAACACGTTGACCGTGCCGTTGAGCTGGGAAAT
CTTGGTCTTCACCACGTCCATGCCGACGCCGCGGCCGGACACGTCGGAAATCTCGGTCTTGGTCGAGAAACC
CGGGGCGAAGATCAGGTTGTAGCACTCCAGGTCGGTCAGGCGGTCCGCCGCGTCGCGCTCCAGCAGGCCTTT
CTCCACCGCCTTGTTGCGCAGCACCTCGGCGTCCATGCCCTTGCCGTCGTCGGTGATCATCAGGAGGATGTG
GTCGCCCTCCTGCTCCGCCGACAGCACCACCTGGCCGACCCGCGGCTTGCCGGCGGCCTCGCGCTCCTCCGG
ACTCTCGATGCCGTGGTCGACGGCGTTGCGCACCAGGTGCACCAGCGGATCGGCGAGGGCCTCGACCAGGTT
CTTGTCGAGGTCGGTCTCTTCGCCCACCAGCTCCAGGTTGATCTCTTTCTTCATGTTCCGCGCCAGGTCGCG
GACCAGACGCGGGAAGCGGCCGAAGACCTTCTTGATCGGCTGCATGCGGGTCTTCATCACCGACATCTGCAG
GTCGCCGGTGACCACGTCGAGGTTGGCCACGGCCTTGGCCATGGCCTCGTCGCCGCTGTTCAGGCCCAGGCG
CACCAGGCGGTTACGCACCAGCACCAGCTCGCCGACCATGTTCATGATCTCGTCGAGACGCGCCGTATCCAC
CCGCACGGTGGTCTCCGCCTCGCTCGCCGCCGGCCTGTCGGGCGCCGCCGGACGCGCGGCGGCGGCCTTGGC
CGGAGCGACCGGTTTCGCCGCGGGACTCTTCGCCGCGATGTTCTTGGCTACCGCCGCAGCGGCCGCCACGGC
TTCGGAGGCGCCGTTGAACTTGCCCTTGCCGTGCAGTTCGTCGAGCAGCGACTCGAACTCGTCGTCGCTGAT
CTCATCGCCGCCCGCGGCGGCCGGCGCCTTgcccTGCTCCGCCGGCGCAGCCGCTGGAGCCGCGGCAGCCGG
TGCGGCGGGTGTGCCGGCGGCTTCCGGGACATCGCCGAACTTGCCCTTGCCGTGCAGTTCGTCGAGCAGCGC
CTCGAACTCGTCGTCGCTGATATCGTCACCAGCGGCAGCCGCGGCCGGCTCGACCGCCTCGGCGGGGACTTG
CGCAGGCTCGGCCGAGACCGCCGGCGGGACGAACTTGCCCTTGCCGTGCAACTGGTCGAGCAACGCCTCGAA
CTCGGCGTCGCtGATCTCGTCGCCAGCGGGAGCCGCGGACGCTTCTGCAACGGCGGAGGCCGGCGCTTCGTC
GCCCTGGAGAGCATCCAGCAACTGCTCGAACTCGTCGTCGGTGATATCGCTgGAGACACTCTGCGCGGGCGC
TTCCGGCGGCGCCGCAGGCTCGGCTGGCGGAACGGCCGCCGGCGGCGCTTGCACAGGTTCCGCGGGCGCGGC
GCCCTCAGGCTCGGCCAGGCGGGCAAGGGCCGCCAGCAGCTCGGGCGTCGCCGGGGTCGGTTCGGACTGCTC
GCGCACCTGGTCGAACATCGCGTTGACCGTATCCAGCGCCTGCAGCACCACATCCATCAGTTCGGAGCTGAC
GCGCCGCTCGCCCTTGCGCAGGATATCGAAGACGTTTTCCGCAATGTGGCAGCATTCCACCAGCGCGTTCAG
CTGGAGGAAGCCGGCACCGCCCTTGACCGTATGGAACCCACGGAAAATGGCATTGAGCAGGTCCATGTCGTC
CGGCCGGCTCTCCAGCTCGACCAGTTGCTCGGACAATTGCTCGAGAATCTCGCCGGCCTCAACCAGGAAGTC
CTGGAGGATTTCTTCATCGGCGTCGAAGCTCATTCGGCTGCTCCCAGAGACGTGTTACTCGAAAGGATCGGC
AGGACCGCTGTCCTGCCGGAAATACCGGCCCGGCTTTCCGGACCGACTTCAGCCCGCCCGCCGGGATCACCG
GCATGA
Translation:
MSHQLVDDETDALGADRQDHHVPLALLLVGRARHQPALEVEQRQGLVADDHHFLAIHDIGARQVKMEDFVDV
DQREGERLATQHHHKGRHDRQGQRHLDDDLRAGPLLREHVDRAVELGNLGLHHVHADAAAGHVGNLGLGRET
RGEDQVVALQVGQAVRRVALQQAFLHRLVAQHLGVHALAVVGDHQEDVVALLLRRQHHLADPRLAGGLALLR
TLDAVVDGVAHQVHQRIGEGLDQVLVEVGLFAHQLQVDLFLHVPRQVADQTREAAEDLLDRLHAGLHHRHLQ
VAGDHVEVGHGLGHGLVAAVQAQAHQAVTHQHQLADHVHDLVETRRIHPHGGLRLARRRPVGRRRTRGGGLG
RSDRFRRGTLRRDVLGYRRSGRHGFGGAVELALAVQFVEQRLELVVADLIAARGGRRLALLRRRSRWSRGSR
CGGCAGGFRDIAELALAVQFVEQRLELVVADIVTSGSRGRLDRLGGDLRRLGRDRRRDELALAVQLVEQRLE
LGVADLVASGSRGRFCNGGGRRFVALESIQQLLELVVGDIAGDTLRGRFRRRRRLGWRNGRRRRLHRFRGRG
ALRLGQAGKGRQQLGRRRGRFGLLAHLVEHRVDRIQRLQHHIHQFGADAPLALAQDIEDVFRNVAAFHQRVQ
LEEAGTALDRMEPTENGIEQVHVVRPALQLDQLLGQLLENLAGLNQEVLEDFFIGVEAHSAAPRDVLLERIG
RTAVLPEIPARLSGPTSARPPGSPA*
AnnotationID:5706GeneID:5704
AnnotatorUID: diggins
Modification Date/Time: 2005-02-24 13:01:46
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15575
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28540
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48706How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 898838Stop: 896601
Length: 2238
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGTCCCACCAACTGGTCGACGACGAAACCGATGCGCTGGGTGCCGACCGACAGGATCACCACGTGCCCCTC
GCCCTGCTCCTCGTGGGCCGCGCTCGGCACCAGCCAGCGCTTGAGGTAGAACAGCGGCAAGGCCTTGTCGCG
GACGATCACCACTTCCTGGCCATCCACGACATTGGTGCGCGACAGGTCAAGATGGAAGATTTCGTTGACGTT
GACCAGCGGGAAGGCGAACGCCTGGCTACCCAGCATCACCATAAGGGTAGGCATGATCGCCAGGGTCAGCGG
CACCTTGATGACGATCTTCGAGCCGGACCCCTTCTGCGAGAACACGTTGACCGTGCCGTTGAGCTGGGAAAT
CTTGGTCTTCACCACGTCCATGCCGACGCCGCGGCCGGACACGTCGGAAATCTCGGTCTTGGTCGAGAAACC
CGGGGCGAAGATCAGGTTGTAGCACTCCAGGTCGGTCAGGCGGTCCGCCGCGTCGCGCTCCAGCAGGCCTTT
CTCCACCGCCTTGTTGCGCAGCACCTCGGCGTCCATGCCCTTGCCGTCGTCGGTGATCATCAGGAGGATGTG
GTCGCCCTCCTGCTCCGCCGACAGCACCACCTGGCCGACCCGCGGCTTGCCGGCGGCCTCGCGCTCCTCCGG
ACTCTCGATGCCGTGGTCGACGGCGTTGCGCACCAGGTGCACCAGCGGATCGGCGAGGGCCTCGACCAGGTT
CTTGTCGAGGTCGGTCTCTTCGCCCACCAGCTCCAGGTTGATCTCTTTCTTCATGTTCCGCGCCAGGTCGCG
GACCAGACGCGGGAAGCGGCCGAAGACCTTCTTGATCGGCTGCATGCGGGTCTTCATCACCGACATCTGCAG
GTCGCCGGTGACCACGTCGAGGTTGGCCACGGCCTTGGCCATGGCCTCGTCGCCGCTGTTCAGGCCCAGGCG
CACCAGGCGGTTACGCACCAGCACCAGCTCGCCGACCATGTTCATGATCTCGTCGAGACGCGCCGTATCCAC
CCGCACGGTGGTCTCCGCCTCGCTCGCCGCCGGCCTGTCGGGCGCCGCCGGACGCGCGGCGGCGGCCTTGGC
CGGAGCGACCGGTTTCGCCGCGGGACTCTTCGCCGCGATGTTCTTGGCTACCGCCGCAGCGGCCGCCACGGC
TTCGGAGGCGCCGTTGAACTTGCCCTTGCCGTGCAGTTCGTCGAGCAGCGACTCGAACTCGTCGTCGCTGAT
CTCATCGCCGCCCGCGGCGGCCGGCGCCTTgcccTGCTCCGCCGGCGCAGCCGCTGGAGCCGCGGCAGCCGG
TGCGGCGGGTGTGCCGGCGGCTTCCGGGACATCGCCGAACTTGCCCTTGCCGTGCAGTTCGTCGAGCAGCGC
CTCGAACTCGTCGTCGCTGATATCGTCACCAGCGGCAGCCGCGGCCGGCTCGACCGCCTCGGCGGGGACTTG
CGCAGGCTCGGCCGAGACCGCCGGCGGGACGAACTTGCCCTTGCCGTGCAACTGGTCGAGCAACGCCTCGAA
CTCGGCGTCGCtGATCTCGTCGCCAGCGGGAGCCGCGGACGCTTCTGCAACGGCGGAGGCCGGCGCTTCGTC
GCCCTGGAGAGCATCCAGCAACTGCTCGAACTCGTCGTCGGTGATATCGCTgGAGACACTCTGCGCGGGCGC
TTCCGGCGGCGCCGCAGGCTCGGCTGGCGGAACGGCCGCCGGCGGCGCTTGCACAGGTTCCGCGGGCGCGGC
GCCCTCAGGCTCGGCCAGGCGGGCAAGGGCCGCCAGCAGCTCGGGCGTCGCCGGGGTCGGTTCGGACTGCTC
GCGCACCTGGTCGAACATCGCGTTGACCGTATCCAGCGCCTGCAGCACCACATCCATCAGTTCGGAGCTGAC
GCGCCGCTCGCCCTTGCGCAGGATATCGAAGACGTTTTCCGCAATGTGGCAGCATTCCACCAGCGCGTTCAG
CTGGAGGAAGCCGGCACCGCCCTTGACCGTATGGAACCCACGGAAAATGGCATTGAGCAGGTCCATGTCGTC
CGGCCGGCTCTCCAGCTCGACCAGTTGCTCGGACAATTGCTCGAGAATCTCGCCGGCCTCAACCAGGAAGTC
CTGGAGGATTTCTTCATCGGCGTCGAAGCTCATTCGGCTGCTCCCAGAGACGTGTTACTCGAAAGGATCGGC
AGGACCGCTGTCCTGCCGGAAATACCGGCCCGGCTTTCCGGACCGACTTCAGCCCGCCCGCCGGGATCACCG
GCATGA