ViewGene

Locus Name:
GeneID:
Location:

GeneID:5701
TrivialName: PA14_45690
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 15:03:07
LocusName:PA14_45690
PAO1 Ortholog Locus:
Sequence Length:150
Protein Length:49
Start: 4064012
Stop: 4064161
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: emb|CAA77537.1| (Z11165) 561 aa (60 kD) Mg chelatase subunit [Rhodobacter capsulatus]
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Sequence:
TTGAAAAGGGTTTTCGCCAATCACCAACTACCGGAGGCGCCACCGCCGCCACTCGAGCCTCCGCCGCCGGAG
AACGAGTCCGAAGACGAACTGGACGAACTGGACGAACTGGACGAACTCGACGACGAGGAACCCGATGAGCTA
GCGTAA
Translation:
MKRVFANHQLPEAPPPPLEPPPPENESEDELDELDELDELDDEEPDELA*
AnnotationID:5703GeneID:5701
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 15:03:23
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15572
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28534
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48703How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 889897Stop: 889748
Length: 150
Start Codon: TTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGAAAAGGGTTTTCGCCAATCACCAACTACCGGAGGCGCCACCGCCGCCACTCGAGCCTCCGCCGCCGGAG
AACGAGTCCGAAGACGAACTGGACGAACTGGACGAACTGGACGAACTCGACGACGAGGAACCCGATGAGCTA
GCGTAA