ViewGene

Locus Name:
GeneID:
Location:

GeneID:5699
TrivialName: PA14_45750
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_45750
PAO1 Ortholog Locus:
Sequence Length:1098
Protein Length:365
Start: 4067927
Stop: 4069024
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAP11641.1| (AE017013) VrrB [Bacillus cereus ATCC 14579]
Identities = 41/159 (25%), Positives = 54/159 (33%), Gaps = 7/159 (4%)
Sequence:
TTGCAGGGCCTCGCCGGCCAGCACCTGGTACTGGCTGAGCAGGTCGGCGGTGCCGATCCAGAGGATCACCAG
GCCCAGCACCAGGGTCAACGGAAAGCCGATGGAGAAGATGTTCAGTTGCGGCGCCGCGCGGGTCATGGCGCC
GAAGGCGAGGTTCACCACCAGCAGCGCGGTGATCGCCGGCAGCGCCAGCAGCAGTGCCGCGCCCATCACCCA
GCCGAGCTTGCCGGCGATGATCCAGAAATGGTTGCCGCTCAGGCCCTCGCCCACCGGCAGGGTGACGAAGCT
CTCGGCGATCACCTCGAACACTACCAGGTGGCCGTTCATCGCCAGGAACAGCAGCGTCACCAGCATGGTGAA
GAACTGGCCGAGCACCGGCACCGAGACGCCGTTGGCCGGGTCGACCATGGAAGCGAAGCCCAGGCCCATCTG
CATCGAGATGATCTGCCCGGCGATCACGAAGGCGTGGAACAGCAACTGCAGGGAAAAGCCGAGCAAGGCGCC
GACCAGGATCTGCTCGCCGATCAGCAGCATGGCCTTCATGCTCAGCGCGTCCACCTGCGGCATCGGCGGCAG
GTTCGGCACCAGCACCACGCAGACGCCCAGCGCCAGGTACAGGCGCACCCGCACCGGCACCAGCTGGGTGCC
GATCACCGGCATGGTCATCAGCAGCGCCGCGACCCGGAACAGCGGCAGCACGAAGCTGGCGATCCAGCCGCC
GATCTGCGCGTTGGTCAGCTCCAGCATCAGCCGATCAGCAGCGGGATGTTGCCGATCAGCGTCTGGGTGTAC
TCCATCAGCTGCCGCAGCAGCCAGGGGCCCAGCACGATCAGGGTGAGCAGGATCACCATCAGGCGCGGCAGG
AAGCTCAGGGTCTGTTCGTTGATCTGGGTGGCGGCCTGGAACATCGCCACCACGAGACCGACCAGCAGGCTC
GGAACCACCAGCACGCCGACGATCATCGCCGTCAGCCACAACGCCTCGCGGAACAGGTCGAGTGCCACCTCA
GGGGTCATGTCTCTCTCCAGCGCGCCAGCGGCGCGTCAAGCCGGCGGCACCGCTAGACGGTGCCGAAACTGC
CCGCCAGCGTCCCGATGA
Translation:
MQGLAGQHLVLAEQVGGADPEDHQAQHQGQRKADGEDVQLRRRAGHGAEGEVHHQQRGDRRQRQQQCRAHHP
AELAGDDPEMVAAQALAHRQGDEALGDHLEHYQVAVHRQEQQRHQHGEELAEHRHRDAVGRVDHGSEAQAHL
HRDDLPGDHEGVEQQLQGKAEQGADQDLLADQQHGLHAQRVHLRHRRQVRHQHHADAQRQVQAHPHRHQLGA
DHRHGHQQRRDPEQRQHEAGDPAADLRVGQLQHQPISSGMLPISVWVYSISCRSSQGPSTIRVSRITIRRGR
KLRVCSLIWVAAWNIATTRPTSRLGTTSTPTIIAVSHNASRNRSSATSGVMSLSSAPAARQAGGTARRCRNC
PPASR*
AnnotationID:5701GeneID:5699
AnnotatorUID: diggins
Modification Date/Time: 2005-02-24 10:10:10
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15568
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28530
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48701How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 885982Stop: 884885
Length: 1098
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCAGGGCCTCGCCGGCCAGCACCTGGTACTGGCTGAGCAGGTCGGCGGTGCCGATCCAGAGGATCACCAG
GCCCAGCACCAGGGTCAACGGAAAGCCGATGGAGAAGATGTTCAGTTGCGGCGCCGCGCGGGTCATGGCGCC
GAAGGCGAGGTTCACCACCAGCAGCGCGGTGATCGCCGGCAGCGCCAGCAGCAGTGCCGCGCCCATCACCCA
GCCGAGCTTGCCGGCGATGATCCAGAAATGGTTGCCGCTCAGGCCCTCGCCCACCGGCAGGGTGACGAAGCT
CTCGGCGATCACCTCGAACACTACCAGGTGGCCGTTCATCGCCAGGAACAGCAGCGTCACCAGCATGGTGAA
GAACTGGCCGAGCACCGGCACCGAGACGCCGTTGGCCGGGTCGACCATGGAAGCGAAGCCCAGGCCCATCTG
CATCGAGATGATCTGCCCGGCGATCACGAAGGCGTGGAACAGCAACTGCAGGGAAAAGCCGAGCAAGGCGCC
GACCAGGATCTGCTCGCCGATCAGCAGCATGGCCTTCATGCTCAGCGCGTCCACCTGCGGCATCGGCGGCAG
GTTCGGCACCAGCACCACGCAGACGCCCAGCGCCAGGTACAGGCGCACCCGCACCGGCACCAGCTGGGTGCC
GATCACCGGCATGGTCATCAGCAGCGCCGCGACCCGGAACAGCGGCAGCACGAAGCTGGCGATCCAGCCGCC
GATCTGCGCGTTGGTCAGCTCCAGCATCAGCCGATCAGCAGCGGGATGTTGCCGATCAGCGTCTGGGTGTAC
TCCATCAGCTGCCGCAGCAGCCAGGGGCCCAGCACGATCAGGGTGAGCAGGATCACCATCAGGCGCGGCAGG
AAGCTCAGGGTCTGTTCGTTGATCTGGGTGGCGGCCTGGAACATCGCCACCACGAGACCGACCAGCAGGCTC
GGAACCACCAGCACGCCGACGATCATCGCCGTCAGCCACAACGCCTCGCGGAACAGGTCGAGTGCCACCTCA
GGGGTCATGTCTCTCTCCAGCGCGCCAGCGGCGCGTCAAGCCGGCGGCACCGCTAGACGGTGCCGAAACTGC
CCGCCAGCGTCCCGATGA