ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5695

TrivialName: PA14_45990

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:34

LocusName: PA14_45990

PAO1 Ortholog Locus:

Sequence Length: 1590

Protein Length: 529

Start: 4090074

Stop: 4091663

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:

Sequence:

ATGCCCAGCTCCCCGCTTCCTTCCGGCCGCAGGCTGCCCGCTTGCGCCTTCGCCGACATCGGCGAGCCCTAC
GCCGTGTTTCAGGCTCCCGGCGGCGTGCTCCTCGCGGTGGCCAGCGCCTTTCATGGGCAACACCCGGGCCGA
CAGCTCGACGTCTACGAACAGAGCCTGCGCCTGTACCGCGGCGGCGACCTCGAATGCATCGCCGTCCTGCCG
GACCTGGGCTTTCCGCTCAACGCCATCGCCTGGCACCCGAGCCGGCCCGTACTGGTGATCGGCGGCGGACGC
TACGACGGCGGCGCCTTCTTCGAAGGCGGTCTGCTGGCCTGGGACTACGCGAGCGGCAAGATCCAATCGCTG
CTCGCCGACAACCGCGAAGTGCTCGCCTGCGACTTCGAGGACGACGGCCGGCGCCTGGCCTTCACCGTCGCC
CCCAGCGACGACCTGGAGGACCGACCGTTGTTCCGCCAGCGCCATTCGCTAGCCTTTCCGGTCGACGCCCCA
CTGGTGCTGGACGACCTGCCCGGCACCCGCCTGCCCTTCGACTGGGCCCTCTACCCTGCCTCGACACAACGC
GAAGCAGCGCTGCCGATCCTGGAAAACCTCGCCCTGGGCAAAGATCGGCGGTTCCTGCATCGTCCACCGGTA
TGGGACCTGTGCTTTCTCGACGGACAACGCCTGGCCATCGCCCGCGCCAGCCCCCGGCTCGAGCTCTGGAAT
CTGGCCAACGACAGCCTGCGCAGCTTCGAACTGGCCGAACGGGGCCAGTGCCTGCAGGTCTTCCATAACGCC
ACGGACGACAGCCTGCTGGTCAATCTGCAACTTGGGTATGCCGCCCAGCGACTGTTCAAGGTGCCGCTAACG
CCGGGACAACCGCTGCTCCTGAGCGACTGCCGCCATCTGCTGGCGCAATCCGCCCAAGGCGGTTTTCTCGCC
CGCCAGATCGCCCTCGAGGGCAAAGACCTGGAAGACCTCGTGCTCGACCCAGCCGGCCGGATCGTCCACAGG
CGCCGTCTCGGACACTACGACCTGTTCAACCACCATCTGCGCATCGACCGCGGCGAAGCCTTCTTCTACCTG
GCCGGCAATCCGCCGGAGCAGCACCAGGACAAAGGCCTGTTCCGCCTCGACCCGCAGACCTTCAAGACCCGC
GAAGTGCTACGCCTGGAGCGCCACCCGGAGCACTTCAACAACCTGCACGGCTGCCTGCTGGGCAATCGCCTG
CTGCTCAACGCCAAGGTCTACAACTCGCCGCATCACGCCTACGGTACCCAGCGCCTGACCTGCTACGACCTG
GAGAGCCGCGGCACGCTCTGGGGCGCGACCCTGTCCGCCCAGGTCAGCGCCTTCGCGCCGTTGCCCGGCGGA
CAATGGATCGCACTGGCGCTGGTCGATGGTCAGGTCGAGGTACGCGACCTCGCCAGCGGCGAATGTCGCTGG
CGCTACCGCACGGCAGACGCCATACCGCTGTGCCTGGCAGTCAGCGACAAACTCCTCGCCATCGGTTTCAGC
CACGGCGGAGTCAGCCTCCTGCAGGTCGCGGCGGATGGCCAGCTCATCGGTCCTCCAGGCGCCAACCCGCGG
CAGTAG

Translation:

MPSSPLPSGRRLPACAFADIGEPYAVFQAPGGVLLAVASAFHGQHPGRQLDVYEQSLRLYRGGDLECIAVLP
DLGFPLNAIAWHPSRPVLVIGGGRYDGGAFFEGGLLAWDYASGKIQSLLADNREVLACDFEDDGRRLAFTVA
PSDDLEDRPLFRQRHSLAFPVDAPLVLDDLPGTRLPFDWALYPASTQREAALPILENLALGKDRRFLHRPPV
WDLCFLDGQRLAIARASPRLELWNLANDSLRSFELAERGQCLQVFHNATDDSLLVNLQLGYAAQRLFKVPLT
PGQPLLLSDCRHLLAQSAQGGFLARQIALEGKDLEDLVLDPAGRIVHRRRLGHYDLFNHHLRIDRGEAFFYL
AGNPPEQHQDKGLFRLDPQTFKTREVLRLERHPEHFNNLHGCLLGNRLLLNAKVYNSPHHAYGTQRLTCYDL
ESRGTLWGATLSAQVSAFAPLPGGQWIALALVDGQVEVRDLASGECRWRYRTADAIPLCLAVSDKLLAIGFS
HGGVSLLQVAADGQLIGPPGANPRQ*

AnnotationID:5697 GeneID:5695

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:46

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:11339

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28522

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:37359

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 5695_cdd.html

URL:

GC ORFID: `48697`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `863835`	Stop: `862246`
Length: `1590`
Start Codon: `ATG`	Truncated Start:
Stop Codon: `TAG`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCCAGCTCCCCGCTTCCTTCCGGCCGCAGGCTGCCCGCTTGCGCCTTCGCCGACATCGGCGAGCCCTAC GCCGTGTTTCAGGCTCCCGGCGGCGTGCTCCTCGCGGTGGCCAGCGCCTTTCATGGGCAACACCCGGGCCGA CAGCTCGACGTCTACGAACAGAGCCTGCGCCTGTACCGCGGCGGCGACCTCGAATGCATCGCCGTCCTGCCG GACCTGGGCTTTCCGCTCAACGCCATCGCCTGGCACCCGAGCCGGCCCGTACTGGTGATCGGCGGCGGACGC TACGACGGCGGCGCCTTCTTCGAAGGCGGTCTGCTGGCCTGGGACTACGCGAGCGGCAAGATCCAATCGCTG CTCGCCGACAACCGCGAAGTGCTCGCCTGCGACTTCGAGGACGACGGCCGGCGCCTGGCCTTCACCGTCGCC CCCAGCGACGACCTGGAGGACCGACCGTTGTTCCGCCAGCGCCATTCGCTAGCCTTTCCGGTCGACGCCCCA CTGGTGCTGGACGACCTGCCCGGCACCCGCCTGCCCTTCGACTGGGCCCTCTACCCTGCCTCGACACAACGC GAAGCAGCGCTGCCGATCCTGGAAAACCTCGCCCTGGGCAAAGATCGGCGGTTCCTGCATCGTCCACCGGTA TGGGACCTGTGCTTTCTCGACGGACAACGCCTGGCCATCGCCCGCGCCAGCCCCCGGCTCGAGCTCTGGAAT CTGGCCAACGACAGCCTGCGCAGCTTCGAACTGGCCGAACGGGGCCAGTGCCTGCAGGTCTTCCATAACGCC ACGGACGACAGCCTGCTGGTCAATCTGCAACTTGGGTATGCCGCCCAGCGACTGTTCAAGGTGCCGCTAACG CCGGGACAACCGCTGCTCCTGAGCGACTGCCGCCATCTGCTGGCGCAATCCGCCCAAGGCGGTTTTCTCGCC CGCCAGATCGCCCTCGAGGGCAAAGACCTGGAAGACCTCGTGCTCGACCCAGCCGGCCGGATCGTCCACAGG CGCCGTCTCGGACACTACGACCTGTTCAACCACCATCTGCGCATCGACCGCGGCGAAGCCTTCTTCTACCTG GCCGGCAATCCGCCGGAGCAGCACCAGGACAAAGGCCTGTTCCGCCTCGACCCGCAGACCTTCAAGACCCGC GAAGTGCTACGCCTGGAGCGCCACCCGGAGCACTTCAACAACCTGCACGGCTGCCTGCTGGGCAATCGCCTG CTGCTCAACGCCAAGGTCTACAACTCGCCGCATCACGCCTACGGTACCCAGCGCCTGACCTGCTACGACCTG GAGAGCCGCGGCACGCTCTGGGGCGCGACCCTGTCCGCCCAGGTCAGCGCCTTCGCGCCGTTGCCCGGCGGA CAATGGATCGCACTGGCGCTGGTCGATGGTCAGGTCGAGGTACGCGACCTCGCCAGCGGCGAATGTCGCTGG CGCTACCGCACGGCAGACGCCATACCGCTGTGCCTGGCAGTCAGCGACAAACTCCTCGCCATCGGTTTCAGC CACGGCGGAGTCAGCCTCCTGCAGGTCGCGGCGGATGGCCAGCTCATCGGTCCTCCAGGCGCCAACCCGCGG CAGTAG