ViewGene
Locus Name:
GeneID:
Location:

GeneID:5688
TrivialName: PA14_46350
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_46350
PAO1 Ortholog Locus:
Sequence Length:687
Protein Length:228
Start: 4124666
Stop: 4125352
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: dbj|BAC17432.1| (AP005216) putative phosphate transport protein [Corynebacterium efficiens YS-314]
Identities = 54/208 (25%), Positives = 81/208 (38%), Gaps = 37/208 (17%)
Sequence:
ATGGTGCTACTCCGCATCCCCCTGCCCCAGCAGCGCCCGATACTTCACCGCCGCCGCGGTCCGCGACGGCAC
GTCCAGCGCCCGCAGCAGCGACGACACATGGATGCGCACCGTGTAGTGGGAGATGTCCAGGGCGCGGCCGAT
CTCCTTGTTGCTCTTGCCCTGGGCCAGCAGGCGCAGGACATCCAGCTGGCGCTCGGTGAGCCCCTCCAGGCG
CGGGCTGGGCTGCAGCGGCAGGAGACCGGAGGGTTCGTAGCGCACCAGCACTTCCCCGGCGCGGATGGCCAG
AATCGCCTGGCCGAGTTCCTCGGGCGCGATGCTCTTGCCGAGGAAGCCGTCGGCCCCTGCATTCATCACTTC
GCCGATGAGCTGCGGGTCGTCGACCATCGAGACGACGATCAGGGTGGTGCGCGGGAACCGGCGGCGCAAGTC
GGCGAGCATCTCGATGCGGGTCAGGCCGGGGAAACGCAGGTCGAGGATCAGCGAATCGGGCTGCTCGCCTTC
GCCAGCCAGGCGCAGGACCCCGGCGAGATCGCCGGCCTCCTCGATCCTGGCCTCGGGCAGCAGGCGCTGGAG
GATACTCAGCATGCCCTCGCGAAACAGCGGATGATCATCGGCGACGATGATGCGGCCAGTCATTCTTGTAGT
CTCCAGGAGTCGCAGTTTCCGCCGCGCATGCTACCTTAG
Translation:
MVLLRIPLPQQRPILHRRRGPRRHVQRPQQRRHMDAHRVVGDVQGAADLLVALALGQQAQDIQLALGEPLQA
RAGLQRQETGGFVAHQHFPGADGQNRLAEFLGRDALAEEAVGPCIHHFADELRVVDHRDDDQGGAREPAAQV
GEHLDAGQAGETQVEDQRIGLLAFASQAQDPGEIAGLLDPGLGQQALEDTQHALAKQRMIIGDDDAASHSCS
LQESQFPPRMLP*
AnnotationID:5690GeneID:5688
AnnotatorUID: diggins
Modification Date/Time: 2005-02-23 21:09:42
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:11327




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:28508




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48690How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 829243Stop: 828557

          
Length: 687


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGTGCTACTCCGCATCCCCCTGCCCCAGCAGCGCCCGATACTTCACCGCCGCCGCGGTCCGCGACGGCAC 
GTCCAGCGCCCGCAGCAGCGACGACACATGGATGCGCACCGTGTAGTGGGAGATGTCCAGGGCGCGGCCGAT 
CTCCTTGTTGCTCTTGCCCTGGGCCAGCAGGCGCAGGACATCCAGCTGGCGCTCGGTGAGCCCCTCCAGGCG 
CGGGCTGGGCTGCAGCGGCAGGAGACCGGAGGGTTCGTAGCGCACCAGCACTTCCCCGGCGCGGATGGCCAG 
AATCGCCTGGCCGAGTTCCTCGGGCGCGATGCTCTTGCCGAGGAAGCCGTCGGCCCCTGCATTCATCACTTC 
GCCGATGAGCTGCGGGTCGTCGACCATCGAGACGACGATCAGGGTGGTGCGCGGGAACCGGCGGCGCAAGTC 
GGCGAGCATCTCGATGCGGGTCAGGCCGGGGAAACGCAGGTCGAGGATCAGCGAATCGGGCTGCTCGCCTTC 
GCCAGCCAGGCGCAGGACCCCGGCGAGATCGCCGGCCTCCTCGATCCTGGCCTCGGGCAGCAGGCGCTGGAG 
GATACTCAGCATGCCCTCGCGAAACAGCGGATGATCATCGGCGACGATGATGCGGCCAGTCATTCTTGTAGT 
CTCCAGGAGTCGCAGTTTCCGCCGCGCATGCTACCTTAG