ViewGene

Locus Name:
GeneID:
Location:

GeneID:5686
TrivialName: PA14_46500
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_46500
PAO1 Ortholog Locus:
Sequence Length:1320
Protein Length:439
Start: 4137179
Stop: 4138498
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK62477.1| (AY034092) putative DNA-invertase [Micrococcus sp. 28]
Identities = 97/279 (34%), Positives = 108/279 (38%), Gaps = 73/279 (26%)
Sequence:
ATGGCAACGCCTGCTGGCCGGGCAATCGGGCATCGCCACGCTCCCGGCGGAGCTGATCGGCGACCTGCCCAT
CAGCATCGGCGGCCAGGTCCCCGACCGTGTCCAGGACCCGCAGGCCGGCTTCGATCCCGACCTGCTGCTGGC
CGCCAAGGAACAACGCAAGATGGACCGCTTCATCCTCTTCGCCCTGGCCGCCGCGCAAGAGGCCCTGGCCCA
GGCCGGCTGGGCGCCGCAGAGCGCCGAGGCGCAGGAGCGCACGGCGACCGTCATCGCCTCCGGGGTGGGCGG
CTTCCATGCCATCGCCGAAGCGGTGCGGACCACAGACGGCAAGGGACCGCGACGCCTGTCGCCCTTCACCAT
CCCGTCCTTTCTCTGCAACATGGCGGCCGCCCATGTGTCGATCCGCCATGGCTTCAAGGGACCGCTGGGCGC
CCCGGTGACCGCCTGCGCGGCGGGCGTGCAAGCCATCGGCGACGCGGCGCGGATGATCCGCGCGGGAGAGGT
CGACGTGGCGCTCTGCGGCGGCGCGGAAGCGACCGTCCACCGGGTCAGCCTGGCCGGCTTCGCCGCCGCGCG
CGCCCTGTCCAGCGATTTCAACGACAGCCCCGAACGCGCCTCGCGCCCCTTCGACCAGGCCCGCGACGGCTT
CGTCATGGGCGAAGGCGCCGGCCTACTGGTCATCGAGGAACTGGAGCACGCCCTGGCGCGCGGCGCCAGGCC
CATCGCCGAGCTGGTGGGCTACGGCACCAGCGCCGACGCCTACCACATGACCGCCGGGCCGGAAGATGGCAG
CGGTGCCCGCCGGGCCATGCAGCAGGCGCTGCGCCAGGCCGGCGTGGAAGCGGCCGCGGTGCAGCACCTGAA
TGCCCACGCCACCTCCACCCAGGTAGGCGACAAGGGCGAACTGGCCGCCATCAAGGCCGTGTTCGGCACCGG
CAGCGGGCTCGCCATCAGCGCGACCAAATCTGCCACCGGCCACCTCCTGGGCGCCGCCGGCGGCATCGAGGC
GATCTTCACGGTCCTGGCACTGCGCGACCAGCTCGCCCCCGCCACGCTCAACCTGGAAACGCCCGACACCGA
CGCCGAGGGCCTCGACCTGGTTCGCGGCGAAGCCCAGCGCTGGCCGATGGAACACGCGCTGTCCAATGGCTT
CGGCTTCGGCGGGGTAAATGCCAGCCTGTTGTTCCGGCGTTGGGTGTAGGGTGGGCGACCCCTCTGCCAGTC
GTTCCTGAGCACGCTGGCGGAGGGGAAGCCACTCATGTCGCATTGCCCCAGAGCGTGTGGTTTTTCCTATGC
TGTAACTGCGTCGTGATGGTCTAG
Translation:
MATPAGRAIGHRHAPGGADRRPAHQHRRPGPRPCPGPAGRLRSRPAAGRQGTTQDGPLHPLRPGRRARGPGP
GRLGAAERRGAGAHGDRHRLRGGRLPCHRRSGADHRRQGTATPVALHHPVLSLQHGGRPCVDPPWLQGTAGR
PGDRLRGGRASHRRRGADDPRGRGRRGALRRRGSDRPPGQPGRLRRRARPVQRFQRQPRTRLAPLRPGPRRL
RHGRRRRPTGHRGTGARPGARRQAHRRAGGLRHQRRRLPHDRRAGRWQRCPPGHAAGAAPGRRGSGRGAAPE
CPRHLHPGRRQGRTGRHQGRVRHRQRARHQRDQICHRPPPGRRRRHRGDLHGPGTARPARPRHAQPGNARHR
RRGPRPGSRRSPALADGTRAVQWLRLRRGKCQPVVPALGVGWATPLPVVPEHAGGGEATHVALPQSVWFFLC
CNCVVMV*
AnnotationID:5688GeneID:5686
AnnotatorUID: diggins
Modification Date/Time: 2005-02-23 20:08:27
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:11323
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28504
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48688How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 816730Stop: 815411
Length: 1320
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCAACGCCTGCTGGCCGGGCAATCGGGCATCGCCACGCTCCCGGCGGAGCTGATCGGCGACCTGCCCAT
CAGCATCGGCGGCCAGGTCCCCGACCGTGTCCAGGACCCGCAGGCCGGCTTCGATCCCGACCTGCTGCTGGC
CGCCAAGGAACAACGCAAGATGGACCGCTTCATCCTCTTCGCCCTGGCCGCCGCGCAAGAGGCCCTGGCCCA
GGCCGGCTGGGCGCCGCAGAGCGCCGAGGCGCAGGAGCGCACGGCGACCGTCATCGCCTCCGGGGTGGGCGG
CTTCCATGCCATCGCCGAAGCGGTGCGGACCACAGACGGCAAGGGACCGCGACGCCTGTCGCCCTTCACCAT
CCCGTCCTTTCTCTGCAACATGGCGGCCGCCCATGTGTCGATCCGCCATGGCTTCAAGGGACCGCTGGGCGC
CCCGGTGACCGCCTGCGCGGCGGGCGTGCAAGCCATCGGCGACGCGGCGCGGATGATCCGCGCGGGAGAGGT
CGACGTGGCGCTCTGCGGCGGCGCGGAAGCGACCGTCCACCGGGTCAGCCTGGCCGGCTTCGCCGCCGCGCG
CGCCCTGTCCAGCGATTTCAACGACAGCCCCGAACGCGCCTCGCGCCCCTTCGACCAGGCCCGCGACGGCTT
CGTCATGGGCGAAGGCGCCGGCCTACTGGTCATCGAGGAACTGGAGCACGCCCTGGCGCGCGGCGCCAGGCC
CATCGCCGAGCTGGTGGGCTACGGCACCAGCGCCGACGCCTACCACATGACCGCCGGGCCGGAAGATGGCAG
CGGTGCCCGCCGGGCCATGCAGCAGGCGCTGCGCCAGGCCGGCGTGGAAGCGGCCGCGGTGCAGCACCTGAA
TGCCCACGCCACCTCCACCCAGGTAGGCGACAAGGGCGAACTGGCCGCCATCAAGGCCGTGTTCGGCACCGG
CAGCGGGCTCGCCATCAGCGCGACCAAATCTGCCACCGGCCACCTCCTGGGCGCCGCCGGCGGCATCGAGGC
GATCTTCACGGTCCTGGCACTGCGCGACCAGCTCGCCCCCGCCACGCTCAACCTGGAAACGCCCGACACCGA
CGCCGAGGGCCTCGACCTGGTTCGCGGCGAAGCCCAGCGCTGGCCGATGGAACACGCGCTGTCCAATGGCTT
CGGCTTCGGCGGGGTAAATGCCAGCCTGTTGTTCCGGCGTTGGGTGTAGGGTGGGCGACCCCTCTGCCAGTC
GTTCCTGAGCACGCTGGCGGAGGGGAAGCCACTCATGTCGCATTGCCCCAGAGCGTGTGGTTTTTCCTATGC
TGTAACTGCGTCGTGATGGTCTAG