ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5679

TrivialName: PA14_46690

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_46690

PAO1 Ortholog Locus:

Sequence Length: 1509

Protein Length: 502

Start: 4163546

Stop: 4162038

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC70262.1| (AP005031) putative translation initiation factor IF-2 [Streptomyces avermitilis MA-4680] Identities = 98/299 (32%), Positives = 108/299 (36%), Gaps = 39/299 (13%)

Sequence:

ATGGAAGTCGCCGGCCTCGATGCGCCGTTCGCCGTCGGCCAGTTCCAGGCGCAGGCGACCTTCGATGACCAG
AACCATCTCCCGCCAGCCGGCGGCGTCGGGTTCCGATACGTAGCGCTCGCCCGGTCCCAGCGACCAGGCCCA
GAGTTCCACCTCGCGCCGCGCCGGTGCGCTGGCGAGGAGGGTGGCGCGGCTCTCGGGGTGGTGGCCGACCCA
GGCCACCGCATTGATCCGCGAGCGGTCGGTGGCCGGGGCCTGGACCAGGTCGGGGAACAGCACGCCGAGGGC
GGCGGCGATACGGTCGAGGGTCGACAGGCTGACATTGACGTCGCCGCTCTCGATGCCCACCAGCATCCGCCG
GCTGACACTGGCCGCGCGGGCCAGCGCTTCCTGGCTGAGGCCGGCTTGCAGGCGCAGGCGGCGGACGTTGCC
GGAGACATGTTCGAGGACGCTGGGGCGTTCGGTAGGGCTGGGCAATATATTGCTCACTGTCGCGGTTTTGCG
CATTATAGTGCACATCCCGTTTCCCGCAGTCCATCGGGCTGCTTCCCACTGCCGGACCTCTTCCATGACCTC
CACCTCCCGCGGCCTCGCCGGAACGCTGTTGCCGGTCGGCCTGCTATTGATCGCCATGGCCTCGATCCAGAG
CGGCGCCTCCCTGGCGAAAAGCATGTTCCCCCTGGTCGGCGCCCAGGGCACCACGGCCCTGCGGCTGTTCTT
CGCCGCGCTGATCCTGCTGCTGCTCCTGCGTCCCTGGCGCAAGCGCCTGAGCCTGCAATCGCTGCGCTCGGT
GGTGGTCTACGGCATCGCCCTGGGCGGCATGAACCTGCTGTTCTATCTCTCGGTGCGCACCGTGCCGCTGGG
CATCGCGGTGGCCCTGGAGTTCACCGGGCCGCTGCTGGTGGCGATCCTCTCCTCGCGGCGCCTGCTGGACTT
CCTCTGGATCGGCCTGGCGGTGTTCGGCATCTGGCTGTTGCTGCCGCTGGGCAACAGCGCCGAGCCGCTCGA
CCTGGTCGGTGCTGCCTATGCCCTCGGCGCCGGCGTGTGCTGGGCGCTGTACATCCTCTTCGGCCAGCGCGC
CGGCGCCGACCATGGCGCCCAGGGCGCCGCGCTGGGGGTGCTGGTGGCGGCGATCCTGGTTGTGCCGATCGG
CGTCGCCCACGCCGGCGCCGACCTCCTCGACCCGGCGCTGATCCCGTTGGCGCTGGGCGTCGCGGTGCTCTC
CACGGCCTTGCCCTACACCCTGGAAATGGTCGCGCTGACCCGCCTGCCGGCGCGCACCTTCGGCACCCTGAT
GAGCATCGAGCCGGCCTTCGGCGCGCTCTCCGGGCTGCTGTTCCTCGGCGAGCGGCTGAGCCCGACCCAATG
GCTGGCCATCGGCGCGATCATCCTCGCCTCGGTCGGCACTACCCTCAGCGTCAAGTCGCGTGGCGCCGCCCC
GGCGCTACCGGCCAAGGACTGAGGCGGCCGCCGCGTCCTCCCGCTGCAGGCGCTCGTGCTGGCGGATGA

Translation:

MEVAGLDAPFAVGQFQAQATFDDQNHLPPAGGVGFRYVALARSQRPGPEFHLAPRRCAGEEGGAALGVVADP
GHRIDPRAVGGRGLDQVGEQHAEGGGDTVEGRQADIDVAALDAHQHPPADTGRAGQRFLAEAGLQAQAADVA
GDMFEDAGAFGRAGQYIAHCRGFAHYSAHPVSRSPSGCFPLPDLFHDLHLPRPRRNAVAGRPAIDRHGLDPE
RRLPGEKHVPPGRRPGHHGPAAVLRRADPAAAPASLAQAPEPAIAALGGGLRHRPGRHEPAVLSLGAHRAAG
HRGGPGVHRAAAGGDPLLAAPAGLPLDRPGGVRHLAVAAAGQQRRAARPGRCCLCPRRRRVLGAVHPLRPAR
RRRPWRPGRRAGGAGGGDPGCADRRRPRRRRPPRPGADPVGAGRRGALHGLALHPGNGRADPPAGAHLRHPD
EHRAGLRRALRAAVPRRAAEPDPMAGHRRDHPRLGRHYPQRQVAWRRPGATGQGLRRPPRPPAAGARAGG*

AnnotationID:5681 GeneID:5679

AnnotatorUID: diggins

Modification Date/Time: 2005-02-23 09:09:13

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11309

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28489