ViewGene
Locus Name:
GeneID:
Location:

GeneID:5678
TrivialName: PA14_46730
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 21:09:32
LocusName:PA14_46730
PAO1 Ortholog Locus:
Sequence Length:573
Protein Length:190
Start: 4164073
Stop: 4164645
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCCGTCAGGCTTCCTGGAGGACTTCCTGGCACACATCGACCCACTGCGCATCCACCAGCTCGGCCATCCG
TTGCGGGGCGATGCGGACCGCGCTGTGCACCGCCCCGGCGGCCGGCAGCACTTCGTCGAAGGCTTGCAGCGA
GACGTCGCAGTACACCGCCAGCGGCGTCGCCAGGCCGAACGGGCAGACTCCGCCGACCGGGTGCCCGGTCAG
CTCGACCACGTCCTCGGCGCCGAGCATCTTCGCCTTGCCGCCGAAGGCGGCCTTGATCTTGCGGTTGTCCAG
CCGCGCGTCGCCGCGCGCCACTACCAGTACGGTGCGCTCGCCGACCCGCAGCGACAGGGTCTTGGCGATCCG
CCCCGGCTCCACGCCATGGGCCTCGGCGGCCAGGGCGACGGTGGCGGTGCTGGTTTCCAGCTCGATGATGCG
CAGGTCCGGGGCTTTCTCGGCGAAGAACCGCCGGACGGATTCGAGGCTCATGGGGTGGGCTCCTTGGCGAAA
ACCCACGAACTTATGCAAGCGCGCCGAGGCTGTCCAGCGCCGCGCGCTCAGGCGAAGCGCACGCAGTAG
Translation:
MPSGFLEDFLAHIDPLRIHQLGHPLRGDADRAVHRPGGRQHFVEGLQRDVAVHRQRRRQAERADSADRVPGQ
LDHVLGAEHLRLAAEGGLDLAVVQPRVAARHYQYGALADPQRQGLGDPPRLHAMGLGGQGDGGGAGFQLDDA
QVRGFLGEEPPDGFEAHGVGSLAKTHELMQARRGCPAPRAQAKRTQ*
AnnotationID:5680GeneID:5678
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 21:09:46
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:15545




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:28487




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48680How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 789836Stop: 789264

          
Length: 573


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCCGTCAGGCTTCCTGGAGGACTTCCTGGCACACATCGACCCACTGCGCATCCACCAGCTCGGCCATCCG 
TTGCGGGGCGATGCGGACCGCGCTGTGCACCGCCCCGGCGGCCGGCAGCACTTCGTCGAAGGCTTGCAGCGA 
GACGTCGCAGTACACCGCCAGCGGCGTCGCCAGGCCGAACGGGCAGACTCCGCCGACCGGGTGCCCGGTCAG 
CTCGACCACGTCCTCGGCGCCGAGCATCTTCGCCTTGCCGCCGAAGGCGGCCTTGATCTTGCGGTTGTCCAG 
CCGCGCGTCGCCGCGCGCCACTACCAGTACGGTGCGCTCGCCGACCCGCAGCGACAGGGTCTTGGCGATCCG 
CCCCGGCTCCACGCCATGGGCCTCGGCGGCCAGGGCGACGGTGGCGGTGCTGGTTTCCAGCTCGATGATGCG 
CAGGTCCGGGGCTTTCTCGGCGAAGAACCGCCGGACGGATTCGAGGCTCATGGGGTGGGCTCCTTGGCGAAA 
ACCCACGAACTTATGCAAGCGCGCCGAGGCTGTCCAGCGCCGCGCGCTCAGGCGAAGCGCACGCAGTAG