ViewGene
Locus Name:
GeneID:
Location:

GeneID:5670
TrivialName: PA14_47290
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_47290
PAO1 Ortholog Locus:
Sequence Length:906
Protein Length:301
Start: 4212419
Stop: 4213324
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCGGACGCGAACCTTCGAACATCTGTTCGATACGCGTCCGCTCGCGCTCCAGTTCGGCCGCCGGCAGCGC
CTTGTACTGCTCGTAGGTGAGGCCCAGGGCATTGCCCGAGCAGGTCAGCGCCACCGTCCACATCCCGGCGCG
GCGCCCTTCGAGGATACCCGGCCAGGTGTCGTCGACCTTCACGCAGGCCGCCACATCGTCGATCCCCAGGGC
GATCACGTTGGCCAGCGCCTGGGCCGGCCATGGCCGGCCGTTGGGCACTTCGTCGGTGGCCACCACGTGGTC
GGCGACGTAACCGTTGGTCTCGGCCAGGGCTACCACCTTCTCCATCACCACCGCCGGATAACCGGAACAGGA
ACCGATCTTCAGGCCCATCCCGCGGAGTTCGGCGATCGCCTGCAGGGCGCCGGGGATCAGCGCCGAATGTTC
GGCGATCTTTTCGATCTGCAGCGGCATGAAGCGCTCGTAGATGGCGGTGACATCGTCGTCGCTGGGCAGGCG
GCCGAAGACGGCGCGGTAGCGCTCGGCGATCGCCGGGATGTCGCAGAGGGTGCGGATGTGGTCCCACTTGCC
CATTCCCATCGGACCGCGCGCTTCCTCCAGGCTGACCTGGACGCCGAATTCGGCGAAAGCCTCGACGAATAT
CTGGGTCGGCGCGAAGGAGCCGAAATCGACCACGGTTCCCGCCCAGTCGAGGATGGCGGCCTGGAGGGTGGC
TGGCTGGTTGTAATTCATTGTCGTGAACCCTTTTCTGCTCGTTGTCGTTCAGTTCAGATCTCGAGGACTTCC
AGTTCGCGCAGCGCCTCGCCGATGGCGGCGACCGCCTGCCGCATCTCCGCGGCGTCGACGTGGCCGATGCAG
CCGACGCGGAAGGTTTCCACCTGGGTCAACTTGCCCGGATAG
Translation:
MRTRTFEHLFDTRPLALQFGRRQRLVLLVGEAQGIARAGQRHRPHPGAAPFEDTRPGVVDLHAGRHIVDPQG
DHVGQRLGRPWPAVGHFVGGHHVVGDVTVGLGQGYHLLHHHRRITGTGTDLQAHPAEFGDRLQGAGDQRRMF
GDLFDLQRHEALVDGGDIVVAGQAAEDGAVALGDRRDVAEGADVVPLAHSHRTARFLQADLDAEFGESLDEY
LGRREGAEIDHGSRPVEDGGLEGGWLVVIHCREPFSARCRSVQISRTSSSRSASPMAATACRISAASTWPMQ
PTRKVSTWVNLPG*
AnnotationID:5672GeneID:5670
AnnotatorUID: diggins
Modification Date/Time: 2005-02-23 05:05:57
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:15537




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:28471




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48672How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 741490Stop: 740585

          
Length: 906


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGCGGACGCGAACCTTCGAACATCTGTTCGATACGCGTCCGCTCGCGCTCCAGTTCGGCCGCCGGCAGCGC 
CTTGTACTGCTCGTAGGTGAGGCCCAGGGCATTGCCCGAGCAGGTCAGCGCCACCGTCCACATCCCGGCGCG 
GCGCCCTTCGAGGATACCCGGCCAGGTGTCGTCGACCTTCACGCAGGCCGCCACATCGTCGATCCCCAGGGC 
GATCACGTTGGCCAGCGCCTGGGCCGGCCATGGCCGGCCGTTGGGCACTTCGTCGGTGGCCACCACGTGGTC 
GGCGACGTAACCGTTGGTCTCGGCCAGGGCTACCACCTTCTCCATCACCACCGCCGGATAACCGGAACAGGA 
ACCGATCTTCAGGCCCATCCCGCGGAGTTCGGCGATCGCCTGCAGGGCGCCGGGGATCAGCGCCGAATGTTC 
GGCGATCTTTTCGATCTGCAGCGGCATGAAGCGCTCGTAGATGGCGGTGACATCGTCGTCGCTGGGCAGGCG 
GCCGAAGACGGCGCGGTAGCGCTCGGCGATCGCCGGGATGTCGCAGAGGGTGCGGATGTGGTCCCACTTGCC 
CATTCCCATCGGACCGCGCGCTTCCTCCAGGCTGACCTGGACGCCGAATTCGGCGAAAGCCTCGACGAATAT 
CTGGGTCGGCGCGAAGGAGCCGAAATCGACCACGGTTCCCGCCCAGTCGAGGATGGCGGCCTGGAGGGTGGC 
TGGCTGGTTGTAATTCATTGTCGTGAACCCTTTTCTGCTCGTTGTCGTTCAGTTCAGATCTCGAGGACTTCC 
AGTTCGCGCAGCGCCTCGCCGATGGCGGCGACCGCCTGCCGCATCTCCGCGGCGTCGACGTGGCCGATGCAG 
CCGACGCGGAAGGTTTCCACCTGGGTCAACTTGCCCGGATAG