ViewGene

Locus Name:
GeneID:
Location:

GeneID:5668
TrivialName: PA14_47480
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_47480
PAO1 Ortholog Locus:
Sequence Length:1449
Protein Length:482
Start: 4230730
Stop: 4229282
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGGTGGATCATGCCCCTTGGACCGCGTCGCGTCATCCCGGCGTCGCGCGGCGAGGCGGAGAAATGGCGAA
AGGAAAGGGCCGGCTCCAGGCGGGGAAGATTCTTACTCGGTCATCAGCCTCGCCCGGCAGCGGGGGATTTGT
CCAGACATGCAGAATCGGCTCGTTCCGAGATACCCGCTCCTGTGTTCTATCCCTCGGGACGCTTGTCCGATT
GGCTTGGCCCGACGCTTGCGCCGGGCTTTTTTCGTCTCGTTTCTCTCAGGGGATCGCCAGGCGGCCGATCCG
GTCGTTTTCCAGGCTGCCGAAGTAGAGCTGGTCGCCCACCGGCTTCGCCGAGGTGATCATGCGCAGGTGGTG
GCCGCTGGTGTCGTGCAGGCTGCGGACGATCTTGCCCTGTTCGTCGATGGCGATGACCAGCCCGTAGGCGGT
CGGCTTGGGCAGGAACATGCGCGGCAGCTTGGCCAGCTGCGCCTTCAGCCAGGGATGCCGGTGGAGGAAGTC
GGCGTTGGCCTTGCGCGGGGTCGGCAGGGCCACCCAGAAGGTACCCTTGCGGTCGCCCTGGAGGTTGTCCGG
CAAGCCCGGCAGGTTGTCGATGAACACCTCGTGCTGGCCAGCCTTCTCGCCTTTCAGCCAGTAGCGGGTGAT
GCGATAGCGGTAGGTCTCGTTGACCAGTACGAAGTCCTCGTTTGCCGAGAGTGCCACGCCATTGGCGAAGTA
CAGGTCCTTGAGCAGCACCTCGGTCTTGCCGGTGGACGGGTCGTAGCGCAGCAGGCGGCCGTGCGGTCGGGC
CTCGAGCAGGTCGAGGATGTAGTCGGGCTGGTGGAACTTGCTGGAAGCGTCGCTGAAGTAGATGCGGCCGTC
GCTGGCGATGTCGAGGTCGTCGGTGAAGGCGAAGGGGACGCCGTCGGCCTCGGTGGCGAGGGTTTCCACCTT
GCCCTGCGGATCGATGCGAAGCAGGCCTTTCCAGGCGTCGGCGAGGATCAGGTTGCCGGCGGCATCGAAGTC
CATGCCCAGCGGGCGGCCGCCGGTGTCGACGAAGGTCTCGACCTTGCCGCTGGCGTCCAGGCGTACCACGCG
GCCGTCGGCGAGACCGGCATAGACGCGGCCCTGGCTGTCCACGGCGGTGTCCTCGGGGCCGTGCAGTTGGCC
CTGGCCAAGCAGCTCGGCCTTCATCAGGGTGTCGTTGGGTTCGAGGACCCCGGTCATCTGCGGAGCGGCCGG
GGCATCCCAGGCGAGCGGGTCGATCGGGCTGGTCTTCAGGGCCAGGTAAAGAGCCGCGCCAGCCAGCAGGAG
GACGATTATTCCGCTGAGCTTCTTCATGCAGTTCCCTTGTTCGGATTGTCGGACAAGGGGCGGAGTATGGAC
ATTCGCTACGTTCATCGGCAAGCGCGGTGCCGAGCGGAATGCTCGCAGGGCGCGAGGCTCTATATAATGCGC
CGCACTTGA
Translation:
MGGSCPLDRVASSRRRAARRRNGERKGPAPGGEDSYSVISLARQRGICPDMQNRLVPRYPLLCSIPRDACPI
GLARRLRRAFFVSFLSGDRQAADPVVFQAAEVELVAHRLRRGDHAQVVAAGVVQAADDLALFVDGDDQPVGG
RLGQEHARQLGQLRLQPGMPVEEVGVGLARGRQGHPEGTLAVALEVVRQARQVVDEHLVLASLLAFQPVAGD
AIAVGLVDQYEVLVCRECHAIGEVQVLEQHLGLAGGRVVAQQAAVRSGLEQVEDVVGLVELAGSVAEVDAAV
AGDVEVVGEGEGDAVGLGGEGFHLALRIDAKQAFPGVGEDQVAGGIEVHAQRAAAGVDEGLDLAAGVQAYHA
AVGETGIDAALAVHGGVLGAVQLALAKQLGLHQGVVGFEDPGHLRSGRGIPGERVDRAGLQGQVKSRASQQE
DDYSAELLHAVPLFGLSDKGRSMDIRYVHRQARCRAECSQGARLYIMRRT*
AnnotationID:5670GeneID:5668
AnnotatorUID: diggins
Modification Date/Time: 2005-02-22 20:08:08
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:11290
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28467
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48670How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 723179Stop: 724627
Length: 1449
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGGTGGATCATGCCCCTTGGACCGCGTCGCGTCATCCCGGCGTCGCGCGGCGAGGCGGAGAAATGGCGAA
AGGAAAGGGCCGGCTCCAGGCGGGGAAGATTCTTACTCGGTCATCAGCCTCGCCCGGCAGCGGGGGATTTGT
CCAGACATGCAGAATCGGCTCGTTCCGAGATACCCGCTCCTGTGTTCTATCCCTCGGGACGCTTGTCCGATT
GGCTTGGCCCGACGCTTGCGCCGGGCTTTTTTCGTCTCGTTTCTCTCAGGGGATCGCCAGGCGGCCGATCCG
GTCGTTTTCCAGGCTGCCGAAGTAGAGCTGGTCGCCCACCGGCTTCGCCGAGGTGATCATGCGCAGGTGGTG
GCCGCTGGTGTCGTGCAGGCTGCGGACGATCTTGCCCTGTTCGTCGATGGCGATGACCAGCCCGTAGGCGGT
CGGCTTGGGCAGGAACATGCGCGGCAGCTTGGCCAGCTGCGCCTTCAGCCAGGGATGCCGGTGGAGGAAGTC
GGCGTTGGCCTTGCGCGGGGTCGGCAGGGCCACCCAGAAGGTACCCTTGCGGTCGCCCTGGAGGTTGTCCGG
CAAGCCCGGCAGGTTGTCGATGAACACCTCGTGCTGGCCAGCCTTCTCGCCTTTCAGCCAGTAGCGGGTGAT
GCGATAGCGGTAGGTCTCGTTGACCAGTACGAAGTCCTCGTTTGCCGAGAGTGCCACGCCATTGGCGAAGTA
CAGGTCCTTGAGCAGCACCTCGGTCTTGCCGGTGGACGGGTCGTAGCGCAGCAGGCGGCCGTGCGGTCGGGC
CTCGAGCAGGTCGAGGATGTAGTCGGGCTGGTGGAACTTGCTGGAAGCGTCGCTGAAGTAGATGCGGCCGTC
GCTGGCGATGTCGAGGTCGTCGGTGAAGGCGAAGGGGACGCCGTCGGCCTCGGTGGCGAGGGTTTCCACCTT
GCCCTGCGGATCGATGCGAAGCAGGCCTTTCCAGGCGTCGGCGAGGATCAGGTTGCCGGCGGCATCGAAGTC
CATGCCCAGCGGGCGGCCGCCGGTGTCGACGAAGGTCTCGACCTTGCCGCTGGCGTCCAGGCGTACCACGCG
GCCGTCGGCGAGACCGGCATAGACGCGGCCCTGGCTGTCCACGGCGGTGTCCTCGGGGCCGTGCAGTTGGCC
CTGGCCAAGCAGCTCGGCCTTCATCAGGGTGTCGTTGGGTTCGAGGACCCCGGTCATCTGCGGAGCGGCCGG
GGCATCCCAGGCGAGCGGGTCGATCGGGCTGGTCTTCAGGGCCAGGTAAAGAGCCGCGCCAGCCAGCAGGAG
GACGATTATTCCGCTGAGCTTCTTCATGCAGTTCCCTTGTTCGGATTGTCGGACAAGGGGCGGAGTATGGAC
ATTCGCTACGTTCATCGGCAAGCGCGGTGCCGAGCGGAATGCTCGCAGGGCGCGAGGCTCTATATAATGCGC
CGCACTTGA