ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5656

TrivialName: PA14_47990

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_47990

PAO1 Ortholog Locus:

Sequence Length: 1437

Protein Length: 478

Start: 4272044

Stop: 4270608

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAB08689.1| (U70214) similar to E. coli YjhH [Escherichia coli] Identities = 64/198 (32%), Positives = 86/198 (43%), Gaps = 14/198 (7%)

Sequence:

ATGGAGGATCGGCATCAGCCACTCGTAGATCGGCATCGCCTCGGCGAAGCGCCCGGCCCTGGCCAGGCGGAA
GATGGTCTCGCCTTCCTTCGGGAATACGTTGGACATTCCCGAGATCCAGCCCTGAGCGCCCACCGCCACGCT
TTCCAGGACCACGTCGTCGAGGCCGGCGAAGAGGATGAAGCGCTCGCCCACCTGGTTGCGTACGTCGATGAA
GCGGCGGGTGTCGCCGGAGCTGTCCTTGAAGCAGACGATGTTCTCGCAGTCGGCCAGGGAAACCAGGATGTC
CGGGGTGACATCGTTCCGGTAGATCGGCGGGTTGTTGTAGACCATCACCGGCAGGTCGGTGCCGCTAGCCAC
GCTGCGGAAATGCTCGGCGGTCTCGTGCGGCTTGGAGGAATAGACCAGCGCCGGCATCACCATGATGCCGTC
GACGCCGACCCGCTCCACCGCCTTGGCCACCTTCGCCGCGCCGGCGCTGGTGAACTCGGCGATCCCGCAGAT
CACCGGCACGCGGCCGCCGGAGGCATCCTTGGCGACCTCGGTGACGGCCATCTTCTCCTCGATGGTCAGCGA
GGTGTTCTCGCCGACGCTGCCGCATACCACCAGCCCGGACACGCCGTCGCGCACCAGGTTGGAAATGACCGT
GTGGGTTTCCTCCAGGTTCACCGAGAAATCGGCGTTGAATTGGGTGGTGACCGCGGGGAATACGCCGCTCCA
GTTGACGTGCTTGCTCATGGTTTCTCCTTTTTTCGTATTTCGTATACGAATTCAATCGGACCGCTGCGGTCC
GAGTCACAGGGCGACGGCAGCGTTCGCCGTCGTGGACGATCCGGTACGCGCCGGATCGGTTTCCGCCCGGCC
GCTGCCTGCGGTCGGTCGGGGTGGTCAGCAGTGGCCGTCGGGCCAGGTATCGGACAGCCGATAGCCTTGCGG
CCAGGGATCGTCCGGGTCGAGCAGGTACTGGTGGATGCCGGTGATCCAGGCGCGCCCGGACAGGCACGGGAG
GATCGCCGGACGGCCGCCGAGTTCGGTCAGCGACTCGATGTGGCAGTAGAATTCCGAACCGATGATGGAGCG
CCCGACGAAGCGTTCGCCGACCCGCAGCTGACCTTTCGCCTGGAGCACCGCCATCCGCGCCGAGCAGCCGGT
GCCGCAGGGCGAGCGGTCGATCTTGCCGGGGCGGATGACCACCGCGTTGCTCGCGCCGAGGACACCGTCGCG
GCGCTCCGGCGGCGCGGCCAGCTGGCAGAAGGACAGATGGTCCCAGTCCGGGTTGGTCGGGTGGTGGAAGCC
CAGTTGTTCGTTGGCCGCGTGGGTGATCTTCAAGCCGGTGGCGACCAGCTCGGCGGCCTCGTCGGCGCGCAG
GGCGAAGCCCAGGCGCCGGGCGTCGGCGATGACGAAGCTGTCGCCGCCGTAGGCGGTGTCGACCTGTAG

Translation:

MEDRHQPLVDRHRLGEAPGPGQAEDGLAFLREYVGHSRDPALSAHRHAFQDHVVEAGEEDEALAHLVAYVDE
AAGVAGAVLEADDVLAVGQGNQDVRGDIVPVDRRVVVDHHRQVGAASHAAEMLGGLVRLGGIDQRRHHHDAV
DADPLHRLGHLRRAGAGELGDPADHRHAAAGGILGDLGDGHLLLDGQRGVLADAAAYHQPGHAVAHQVGNDR
VGFLQVHREIGVELGGDRGEYAAPVDVLAHGFSFFRISYTNSIGPLRSESQGDGSVRRRGRSGTRRIGFRPA
AACGRSGWSAVAVGPGIGQPIALRPGIVRVEQVLVDAGDPGAPGQAREDRRTAAEFGQRLDVAVEFRTDDGA
PDEAFADPQLTFRLEHRHPRRAAGAAGRAVDLAGADDHRVARAEDTVAALRRRGQLAEGQMVPVRVGRVVEA
QLFVGRVGDLQAGGDQLGGLVGAQGEAQAPGVGDDEAVAAVGGVDL*

AnnotationID:5658 GeneID:5656

AnnotatorUID: diggins

Modification Date/Time: 2005-02-22 11:11:37

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11267

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28444