ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5649

TrivialName: PA14_48180

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 10:10:19

LocusName: PA14_48180

PAO1 Ortholog Locus:

Sequence Length: 1551

Protein Length: 516

Start: 4289659

Stop: 4291209

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAM38979.1| (AE012064) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 8/143 (5%)

Sequence:

GTGCACCTCGCCCCACGCGTCCCGCTCCAGGGTCGAGGCATGGGTACAGGCGGCGGCGGTGACATCCACCCG
CATGTCGACGTTCGAGGTGCTGCGCTTGACCGCGTAGGCCGGGTCGTCCACCGCCAGGCCTTGGCGCTCGCT
GCGCTGGTGGCCGCCCACCACCAGCAACTGCTCGGTGACGAAGGAGGACGGCAGGCGGTATTCGTCGGTACC
GGAGTAGGACGAGCCGTTACCGGCGGAGTTGACCACCAGCACGTCCGGATGCTCCTTGCGCAGCCAGAGGAA
GAACTCCTCGAGCAACTCCTCGTAGCCGCTCATGGCGATCCCCGAGCGCACCAGCGAATCCACCTCGTCGCC
GTCGACGTCGCGAGCGCCGACGCGGTGGATGCCCCAGCTCCAGTTGAGCACCCGCACGCCATCCTCCACCAG
GTTCACCGAAGCGGCGACGTTGGCCGTGATGCCAGCGTCGGAATTGCGCTCGACGATCACTTCGAAACCCTG
GCTGGCGCGGTCCAGCCCACGCAGGAAGCCACTGTTGCCGCCCTGGTCCCAGCGCGCGGCGAGGATGCCGGC
GACCGTCGAACCGTGGTTGTCGGGACGTTCGGCATCGCGCGCGTAGAGGCAGGTACGCGGCGCGGGCGCCTT
GCAGGGGCCGAGGTAGTCGGCGAAGTCGGGGGCGTCGAAGTCGACGTCGCGCTCGATCACCCCGATGCGCAC
CGGGCGGGTCTCCAGCGGGGCCTGGCGGGCGCGGACCCGACGCTGGTAATAGTTCACCGCGTCCATGAAACG
ATTGGCCGCCCACTCGTCGGAGTCGCTGTCCGGCTTGTCCACGGGCCGGCGCGCCGCCTCGGTTTCCTCGCC
CTTCTCCGGCGCGGACTCCTCCACCACCACGGCGTCCACGCTGGTCTCGCTGCCGATGCGGAGGACCAGCGC
GTCGCGCTGGACGAGGTCGCGCGCCGGCAGGCGCAACTGGTAGAGGTTCAACGGCGGGATCGCGCCGACCAC
CCGCGCGCCATATTTATCGGCCAGGCGTTCGGCCTCCCGGCGACCGTCGTGGTTCTCCTCGATCAACAGGCT
GACCAGGTCGACGTAGGTGGTCAGGCCATCCATGTTCTTCGCCACCTCGTCGGGACCGGCGGCGAGCACATG
GCTGCCGTTCAGGGTCAGCCATACCGGATTGCTGCTGCGCCCGCCCTGCTCCAGCCAAAGCGGACCGCTGGC
GTGGCCACGGCGGTCCAGGCGGAGCCGCAGGCCGTCGCCCTCGCGCCGCAGGGCGGTGGCCGGCAGTTCGCG
GCCGTCCAGCAACAGGCGCGGCAGGCCGGCACCCAGGCCGCGCACGCGCAGGCACCACTCCTGCCGCTCGCT
GGCCAGGAGATCGCCGCAGCGCTCCAGGCGCTCCAGGCGCAGGGGTGTTTCGGCGGCGACCAAAGGACTGCC
CAGGGACGCGAAAAGGATGGCGAAAACGGCACGGCGCAGCGGCATGGACTCAGCTTCCGGAACGGGGACCTG
TTGTTCCGACCGCCTGGCGAAACGCTTCGTTCAGGTTGA

Translation:

MHLAPRVPLQGRGMGTGGGGDIHPHVDVRGAALDRVGRVVHRQALALAALVAAHHQQLLGDEGGRQAVFVGT
GVGRAVTGGVDHQHVRMLLAQPEEELLEQLLVAAHGDPRAHQRIHLVAVDVASADAVDAPAPVEHPHAILHQ
VHRSGDVGRDASVGIALDDHFETLAGAVQPTQEATVAALVPARGEDAGDRRTVVVGTFGIARVEAGTRRGRL
AGAEVVGEVGGVEVDVALDHPDAHRAGLQRGLAGADPTLVIVHRVHETIGRPLVGVAVRLVHGPARRLGFLA
LLRRGLLHHHGVHAGLAADAEDQRVALDEVARRQAQLVEVQRRDRADHPRAIFIGQAFGLPATVVVLLDQQA
DQVDVGGQAIHVLRHLVGTGGEHMAAVQGQPYRIAAAPALLQPKRTAGVATAVQAEPQAVALAPQGGGRQFA
AVQQQARQAGTQAAHAQAPLLPLAGQEIAAALQALQAQGCFGGDQRTAQGREKDGENGTAQRHGLSFRNGDL
LFRPPGETLRSG*

AnnotationID:5651 GeneID:5649

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 10:10:41

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15514

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28430