ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5646

TrivialName: PA14_48250

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_48250

PAO1 Ortholog Locus:

Sequence Length: 1416

Protein Length: 471

Start: 4294092

Stop: 4295507

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA90940.1| (Z54213) alginate lyase [Pseudomonas aeruginosa] Identities = 162/519 (31%), Positives = 188/519 (36%), Gaps = 124/519 (23%)

Sequence:

TTGCGTGGCGCTGGCGCTGGGGATCTCCACCGCGCTGGGCTGCGCGAACCGCAACCAACCCGCGCCACGCGC
GGAAAGCCTCGACCCTGGCCTGTCGAGGGTGGCGGGAACCCGCGGCGACGCGCTGCCCGCCCAGTGGTGGAC
GCTCTACCAGGACCCTGGGCTGAACCACCTGGTGGCCGCCGCGCTGCGCCACAACCGCGACCTGGCCGCAGC
CGATGCCCATGCCCGCGCGCTCCTCGGCCATCTGCGCGGCGCACAGGGCGAACGCTGGCCACGGACCGAGGT
CGGCTATGGCTACCAGTATGGGCGCGACGGCGACGACCAGACCCTCGCCGAAGCCACCGACGAGGAGCTGCG
CAGCCAGTGGAAACACACCGCCCGCCTCGACCTGTCCTACCAGTTGGACCTGTGGGGCGAAGTCCGCGCCCG
CATCGCCGCGGCGAAGGCGGATGCCGAAGCGGCGCAAGCGGCGCGCGACCTGCTCAGGGTCAGCGTGGCCAG
CCAGACCACCCTCGCCTACGTCCGCGCCTGCGCCCTGGCGCGACGGGCAGAGGTACAACGCCGATCGGTCGG
CCTGCTCGACGCGAGCCTGGCGCTGAGCGAACGCCAGCTCGCCGCCGGCCTTTCCAGCGAGCTGCAGCGACG
CCGGCTGCTGGCCTTGCGCGAGCGGACCCGCGCCGCGCTGCCGATGCTCGAGGCGCGGCGGCGCGCGGCACT
CTACGAACTGGCGCTGCTCAGCGGGCGCTCGCCGCGCCAGTTGGACGCTCCTGCCGCGACCTGCGCCGGCAT
ACCGCAACTGCGCCGTGCCCTGCCCACCGGCGACGGCTGGAGCCTGCTGGCGCGCCGCCCGGACGTCCGCGC
GGCCGAGCGCCGGCTCGCCGCCGCCGACGCCCGGCGCGCGCTGGCCGAAGCCGAGCTGTACCCGCGCATCAG
CTTCGCCGTCGGCGCCGAAACCTCCGCAGCGACCCTCGCCGGCCTCGGCGGCAGCGGCGCGCTAGCCTACGC
GGCCGGTCCTCTGCTGGGCTGGCGCTTCCCCAACCGGGAAAGCGCGCGAGGCCGCCTGGACAGCGCAGCGGC
AGAGCGCGACGCCGCTCTGGCGCGCTTCGACGGAGCGGTGCTCGGCGCCCTGCGCGAGGTCGAGCGTGCCTT
GGCGCTGTATGCCGGCGAGCGCCAGCGGCGTGCCGACCTCCAGCGTGCCCTCGACGAGCAGCGCCACGCCTA
CCGGTTGGCGCGCAGCAACTATCGCGCCGGCGCCCTCGATGCCCTCGAGCTGCTCGACAGTCAACGCAGCCT
GGTCGCCGACCGGGCGCGCCTGGTCGACGCCGAGATGCGCGTCGCCGAGCGCCAGGTCGAACTGTTCCGGGC
TCTCGGCGGCGGCTGGCAAGCCGCTCCCAGCCCCTCCCACCAGGATAA

Translation:

MRGAGAGDLHRAGLREPQPTRATRGKPRPWPVEGGGNPRRRAARPVVDALPGPWAEPPGGRRAAPQPRPGRS
RCPCPRAPRPSARRTGRTLATDRGRLWLPVWARRRRPDPRRSHRRGAAQPVETHRPPRPVLPVGPVGRSPRP
HRRGEGGCRSGASGARPAQGQRGQPDHPRLRPRLRPGATGRGTTPIGRPARREPGAERTPARRRPFQRAAAT
PAAGLARADPRRAADARGAAARGTLRTGAAQRALAAPVGRSCRDLRRHTATAPCPAHRRRLEPAGAPPGRPR
GRAPARRRRRPARAGRSRAVPAHQLRRRRRNLRSDPRRPRRQRRASLRGRSSAGLALPQPGKRARPPGQRSG
RARRRSGALRRSGARRPARGRACLGAVCRRAPAACRPPACPRRAAPRLPVGAQQLSRRRPRCPRAARQSTQP
GRRPGAPGRRRDARRRAPGRTVPGSRRRLASRSQPLPPG*

AnnotationID:5648 GeneID:5646

AnnotatorUID: diggins

Modification Date/Time: 2005-02-22 08:08:25

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15509

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28425