ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5635

TrivialName: PA14_48580

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_48580

PAO1 Ortholog Locus:

Sequence Length: 2187

Protein Length: 728

Start: 4322343

Stop: 4320157

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAC16118.1| (AF010496) potential exonuclease [Rhodobacter capsulatus] Identities = 173/683 (25%), Positives = 225/683 (32%), Gaps = 134/683 (19%)

Sequence:

GTGCGACAGCACTACGCGCTGCGGCGCGCGGAGGGTGCCGAGCTGCTGCTGGAGCCAGGGCAGGAAGGCGAA
CTCGACCTGCGGCGCGGTGTGGATCACGGCGACATAGTCTTCGCCATAGAGCGGGCAGTCGACCTTCAGGCA
GCAGACGTCGATCACCTCGTCCAGGCCGTTGAGCGCCCGTTCGCATTCATTCAGGTGGAACAGGTTGCCGCC
CTTGTTGATGGTGCCGTCGCAACGGCCGAGGACGTGCACGCAGCGGTCCTCGTCGAAGTAGGCGAGGTCCTG
GGTGTTCAGCCAGCCGTCCTCGAGCACCTGGGCGGTCAGGTCGGGGCGGTTGACGTAGCCGGAGAACAGGCT
CGGCGTGCGCACCCACAGGCGCCCGCGTTCGCCGCTGCCCTCCAGCGGGCGGCCGTCGGGGTCGGTCAGCTT
GAGTTCCAGGCCGACGGCCGGTCCCACCGAGTTGTCGAACGCGTCGCCGCGACGCTTGCCGAAGAGGAAGGC
GAAGCCGCACTCGCTGAGGCCGTAGATGTTCGCCAGCGCCGCGTAGTCGCGCTGGAAGGCCGCCTGCAGGTC
GGCGTCCAGGCGCGCCGAGCCGGCGACGCAGAGCAGGCGCTGCAACGGCAAGCGGCGCGGCGGCGGGGAGCC
TTCCTTGACCATGTGGTTGACCACCGGCGGCACCAGGTAGAGGAAACTGATGCCGAAGCGTTCCACGTATTC
CCAGAAGCCTTCGCTGTCGGCCCAGCAGTGCAGCGGCAGGAGCACCGCGCTGCCGCCGTACAGCAGCGGGAA
GAGGAAATTGATGCCGAGGATGCCCAGGCCGCTGATCCGGTAGAAGCAACCGGAGCGCGTGTGCTCGCCGAT
GCCCAGGCAGTCGCGGCCGATGCGGTAGGCATGGAGCATGGCCTGCTGGCTGAGTTCGATGCCTTTCGGCTG
GCCGGTGGTGCCCGAGGTGAACAGGATCATGTGGCTGTGCGCGGCGCGGTCGAGCCGGCGCGTCGCGCTGCG
CTCGAAGTCCAGCGCCAGGCGCAGCCCGGCCAGCGCGCCCTCGAGCGGATGTTCGCTGGCCAGCGCTTCCAG
GCGCATCTCGTCGACGATGGCCTGCTTCGCGGCCTCCCCCCACTCGGGATCGATCAGCACCAGATGCTTGCC
CGCGCGCATGACCGCATAGATCAGGCAGAGGTTGCGGTAGCTGTTGTCCAGCAGCACGCCGACACTGCGGCA
GGCATGCGCGGCGATCTGCTCGGCGAGGGCGTCGACCTGGCGGTCGGCGTCGCCCCAGGTGTATTCCAGCGG
TCGCTCCGGCTCGCGGGCGTCGATCAGGAACGGCCGCCGCGGGTCGGCGCTGCCGAGATGGCGGAGGGTGCT
GTCGAGCGATACGGGTACGGGGAGGCTGCTCATGCCGGCTCCTCAGCGATTCAGCGCGGTGAAGGCGTGGAT
GTCGAAGTTCACCGCCACCTGCGGCGCGCTCTCGATCTCGCGCACCGCGGCGATGAAGCGGTCGGCGTAGTC
TTCGCCGCCTTCCTGCTCGATGTAGCGGGTCACGTAGCTGGTGGAGAGGAAGAACAGCGCGACCTCCTCCGG
GCTGAGGAAGATGATGTTGGCGAACACTTCGCGGCGGCAGTCGCGCAGGTGCGGGCAACTGCCCATGATCTC
CAGGGTGTCGTCATAGCGGGTCAGGCGCGGATCACGGTGTTTGGCCCACTTGTTCACCAGTTCGTGCTCGAT
GAAGTCGCGCAGCGGCCCGTAGGCGATCGGGAAGTCGTACTTGTAGGCGCAGAACAGCCCGCCGGGGGTCAG
CCAGTCGGCCATGCGCGTCAGCACCTGCTTGCGGTCCATCCAGTAGAAGGAGGTGGCGCTGGTGACCAGGTC
GAAGCGGCGTTGCGGCGCGAAGGTTTCCGCCGGCGACACGCTGAAGCGGATCTCCGGGTAGTTCTCGCGGGC
CTTGGCGATCAGCGCCTCGCCCAGGTCGCTGCCTTCCACGTAGCGGAACCAGGGTTGCAGGCGGACGGTCGA
GACGCCGTTGCCGCAGCCGATGTCCAGCGCCGCTTCGCGTGCCGGGGCGCGTTCGGCGAGGTTGCGGTAGAG
CGAATCCGGATAGGCGATCTTGCCGCGGACCACGTTGTAGGCGTCTGCGTGCTTGTCGAACTGCTTCATTGG
GTAATCTCCAGTAGGCTCTCGTGGTAA

Translation:

MRQHYALRRAEGAELLLEPGQEGELDLRRGVDHGDIVFAIERAVDLQAADVDHLVQAVERPFAFIQVEQVAA
LVDGAVATAEDVHAAVLVEVGEVLGVQPAVLEHLGGQVGAVDVAGEQARRAHPQAPAFAAALQRAAVGVGQL
EFQADGRSHRVVERVAATLAEEEGEAALAEAVDVRQRRVVALEGRLQVGVQARRAGDAEQALQRQAARRRGA
FLDHVVDHRRHQVEETDAEAFHVFPEAFAVGPAVQRQEHRAAAVQQREEEIDAEDAQAADPVEATGARVLAD
AQAVAADAVGMEHGLLAEFDAFRLAGGARGEQDHVAVRGAVEPARRAALEVQRQAQPGQRALERMFAGQRFQ
AHLVDDGLLRGLPPLGIDQHQMLARAHDRIDQAEVAVAVVQQHADTAAGMRGDLLGEGVDLAVGVAPGVFQR
SLRLAGVDQERPPRVGAAEMAEGAVERYGYGEAAHAGSSAIQRGEGVDVEVHRHLRRALDLAHRGDEAVGVV
FAAFLLDVAGHVAGGEEEQRDLLRAEEDDVGEHFAAAVAQVRATAHDLQGVVIAGQARITVFGPLVHQFVLD
EVAQRPVGDREVVLVGAEQPAGGQPVGHARQHLLAVHPVEGGGAGDQVEAALRREGFRRRHAEADLRVVLAG
LGDQRLAQVAAFHVAEPGLQADGRDAVAAADVQRRFACRGAFGEVAVERIRIGDLAADHVVGVCVLVELLHW
VISSRLSW*

AnnotationID:5637 GeneID:5635

AnnotatorUID: diggins

Modification Date/Time: 2005-02-22 06:06:40

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15497

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28403