ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5627

TrivialName: PA14_49120

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_49120

PAO1 Ortholog Locus:

Sequence Length: 1503

Protein Length: 500

Start: 4363184

Stop: 4364686

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA46093.1| (X64876) orfA [Bordetella pertussis] Identities = 85/330 (25%), Positives = 116/330 (35%), Gaps = 54/330 (16%)

Sequence:

TTGAGCTTAGACCGCTTCGCGGCCGCCCACCGGAATATCGCTGGCAGGCGACGAAGCGTTGCCCTCGCCGGC
CAGTTCGCGCTGCAAGGTGCCCTCGTCGAGCTGCTTGCACCACTTGGAAACCACTACCGTGGCCACGCCGTT
GCCGACCAGGTTGGTCAGCGCGCGGGCTTCGGACATGAAGCGGTCGATGCCGAGGATCAGCGCCAAGCCGGC
GACCGGCAGGTGGCCGACGGCGGAAAGGGTCGCGGCGAGCACGATGAAGCCGCTGCCGGTGACGCCGGCGGC
GCCCTTGGAAGCGATCAGCAGCACCAGCAGCAGGGTGATCTGGTGGGTGATGTCCATCGGCGTATCGGTGGC
CTGGGCGATGAACACCGCGGCCATGGTCAGGTAGATCGAGGTGCCGTCGAGGTTGAAGGAGTAACCGGTGGG
AATCACCAGGCCGACCACCGACTTGTTGCAGCCGAGCTTCTCCATCTTGTCGATCATCCGCGGCAGAGCCGA
CTCGGAAGACGAGGTGCCCAGCACGATCAGCAGTTCCTCGCGGATGTACCTGATGAAGCGCAGGATGCTGAA
GCCGTGGGCGCGGGCGATGCCGCCGAGGACGATGAGCACGAACAGGATGCAGGTGATGTAGAAGCACAGCAT
CAGCTGGCCGAGCTGCACCAGCGAACCCACACCGTAGGCGCCGATGGTGAAGGCCATGGCGCCGAACGCGCC
GATCGGGGCGACCTTCATGATCACGTTGATGATGTTGAACATCACGTGGGAGACGCGCTCGATGAACTCGAA
CACCGGCTTGCCGTAGCTGCCCAGGCGATGCAGGGCGTAGCCGAAGAGCACGGAGAAGAACAGGACCTGGAG
GATGTCGCCGTTGGCGAACGCGCCGACCACGGTGCCGGGGATCACGTTCATCAGGAAGTCGACAGTGCTCTG
CTTCTCGCCGGCAGCGGCGTAGGCAGCGATCTTGCTGGTGTCGAGGGTGTTCGGGTCTACGTGCATGCCGGC
GCCCGGCTGGACCACGTTGACCACTACCAGGCCGATGATCAGGGCCACGGTGGAGACGACCTCGAAGTACAG
CAGCGCCATGCCGCCGGTCTTGCCGACCGACTTCATGCTCTGCATGCCGGCGATGCCGGTGACCACGGTGCA
GAAGATGATCGGCGCGATGGCCATCTTGATCAGTTTGACGAAGCCGTCGCCGAACGGCTTCATCGCCACCGC
CGTTTCCGGGTACCAGTGGCCGAGCGCGATACCGATGGCGATGGCGACCAGAACCTGCACGTACAGGCTCTT
GTAGAAGGGTTGTTTGGTCATGGGCAGAGTCCTCACGGGGGCGCTTCGCCAGTTCCCTGGAACGCGCTCACC
GGTAGCGTTACCCCCCTTGCTGGGGAGATTTTTTGTCGTGAACCGCCGCGGCGGAACCTTGCCCAGGCATTG
CAGAGGCTGTGCCAGGATGCTCTTTCTCTAAATAAAATCCTTATATATCAACAAGTTAAATAA

Translation:

MSLDRFAAAHRNIAGRRRSVALAGQFALQGALVELLAPLGNHYRGHAVADQVGQRAGFGHEAVDAEDQRQAG
DRQVADGGKGRGEHDEAAAGDAGGALGSDQQHQQQGDLVGDVHRRIGGLGDEHRGHGQVDRGAVEVEGVTGG
NHQADHRLVAAELLHLVDHPRQSRLGRRGAQHDQQFLADVPDEAQDAEAVGAGDAAEDDEHEQDAGDVEAQH
QLAELHQRTHTVGADGEGHGAERADRGDLHDHVDDVEHHVGDALDELEHRLAVAAQAMQGVAEEHGEEQDLE
DVAVGERADHGAGDHVHQEVDSALLLAGSGVGSDLAGVEGVRVYVHAGARLDHVDHYQADDQGHGGDDLEVQ
QRHAAGLADRLHALHAGDAGDHGAEDDRRDGHLDQFDEAVAERLHRHRRFRVPVAERDTDGDGDQNLHVQAL
VEGLFGHGQSPHGGASPVPWNALTGSVTPLAGEIFCREPPRRNLAQALQRLCQDALSLNKILIYQQVK*

AnnotationID:5629 GeneID:5627

AnnotatorUID: danlee

Modification Date/Time: 2004-02-03 15:03:20

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

No hits found, no hypothetical conserved domains identified.

Structural Features:

Genomic Context:

Comment:

ReferenceID:15489

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28389