ViewGene
Locus Name:
GeneID:
Location:

GeneID:5626
TrivialName: PA14_49140
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_49140
PAO1 Ortholog Locus:
Sequence Length:1032
Protein Length:343
Start: 4365702
Stop: 4364671
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGTAGATCGCCAGGTCGCGGCGCAGGTGGTCCTTGAGTTGCTGGAAGCTGCCGCCTTCCTCGCGCAGGTG
GCGTCGCAGGGTCTGCGAACTCATGTGCAGCTGGCGGGCGACCTGGTCGAGGTCCGGCCAGCGCCGGCAGTC
GCGGCCGAGCAGGCGGCGGATCTGGCTGGTCAGGCTGTCGCCGCCGTCCGGGCGCGCCAGCAGGTCGGCGGG
AGAGTGCTGGAGGAACTGCTTGAGGGTGCGTTCGTCCTGCAGCAGCGGCATCCCCAGGTAGCGGGCGGCGAA
CAGCAGGCTGGTGCAGCCGGCGGAAAACCGCCGGGGGCAGGGAAACAGCAGGTCGTACTCGGCCTGGTGGTC
CGGCGCCGGGTAGCTGAAGGTGGCTTCCTCCAGGCGGATGCGCTGGCCGATCAGCCAACTGGCGAGGCGGTG
CCAGATCACCAGCAGGCTTTCGGCGAGAAAGTGATCCGGGTCCGACAGGTGGCGTTCCTCGAGGCTCAGGCG
CACCAGGTCGCCTTCGCGCCGCAGGTGGATCAGCGGCGCCTGGGGGAACAGGCCGTAGAACAGTTCGCCGCG
CTGCAGGGCCTTTTCCAGGGTCCGGCAATGAATCAGGGTGTGGCACATCATGGCGAAGGTGCCGCGCTTGCT
GCGGACTTCGCCGAAGCCCATGTATTCGTCGTCCAGCACTTCCCAGAGCAACTGCATCAGACGGGTGAACTG
CTCCGGCGCGATGCGTGCCCGCGGTTCGTCCAGCAGGGCCGGCTGGATGCCGGCGCGACGCAACAGGGCGGG
GCCGTCCAGGCCTTGGCGCGTGGCCCCGCGCAACGCGGCGCGGACGAAATGGCTGGCGATGGTGCGCTCACG
CATGGCGGCGTCCTTGTTGTTGGAACGGCGATGGTAGGGCGCCACCCGGAAGACGACAAgggtGGTGGCGGA
CTCCCGCCATGCTCGCGCGGCACAGCCGGCCCGCCGGGCGGTAATCCGCCACGCTTAGCCCGCTATGCAATT
TTCATTTTTTATTTAACTTGTTGA
Translation:
MVDRQVAAQVVLELLEAAAFLAQVASQGLRTHVQLAGDLVEVRPAPAVAAEQAADLAGQAVAAVRARQQVGG
RVLEELLEGAFVLQQRHPQVAGGEQQAGAAGGKPPGAGKQQVVLGLVVRRRVAEGGFLQADALADQPTGEAV
PDHQQAFGEKVIRVRQVAFLEAQAHQVAFAPQVDQRRLGEQAVEQFAALQGLFQGPAMNQGVAHHGEGAALA
ADFAEAHVFVVQHFPEQLHQTGELLRRDACPRFVQQGRLDAGATQQGGAVQALARGPAQRGADEMAGDGALT
HGGVLVVGTAMVGRHPEDDKGGGGLPPCSRGTAGPPGGNPPRLARYAIFIFYLTC*
AnnotationID:5628GeneID:5626
AnnotatorUID: danlee
Modification Date/Time: 2004-02-03 15:03:22
Gene Name:
Confidence Code:4
GeneProduct:hypothetical
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
No hits found, no hypothetical conserved domains identified.






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:15487




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:28387




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48628How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 588206Stop: 589237

          
Length: 1032


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGGTAGATCGCCAGGTCGCGGCGCAGGTGGTCCTTGAGTTGCTGGAAGCTGCCGCCTTCCTCGCGCAGGTG 
GCGTCGCAGGGTCTGCGAACTCATGTGCAGCTGGCGGGCGACCTGGTCGAGGTCCGGCCAGCGCCGGCAGTC 
GCGGCCGAGCAGGCGGCGGATCTGGCTGGTCAGGCTGTCGCCGCCGTCCGGGCGCGCCAGCAGGTCGGCGGG 
AGAGTGCTGGAGGAACTGCTTGAGGGTGCGTTCGTCCTGCAGCAGCGGCATCCCCAGGTAGCGGGCGGCGAA 
CAGCAGGCTGGTGCAGCCGGCGGAAAACCGCCGGGGGCAGGGAAACAGCAGGTCGTACTCGGCCTGGTGGTC 
CGGCGCCGGGTAGCTGAAGGTGGCTTCCTCCAGGCGGATGCGCTGGCCGATCAGCCAACTGGCGAGGCGGTG 
CCAGATCACCAGCAGGCTTTCGGCGAGAAAGTGATCCGGGTCCGACAGGTGGCGTTCCTCGAGGCTCAGGCG 
CACCAGGTCGCCTTCGCGCCGCAGGTGGATCAGCGGCGCCTGGGGGAACAGGCCGTAGAACAGTTCGCCGCG 
CTGCAGGGCCTTTTCCAGGGTCCGGCAATGAATCAGGGTGTGGCACATCATGGCGAAGGTGCCGCGCTTGCT 
GCGGACTTCGCCGAAGCCCATGTATTCGTCGTCCAGCACTTCCCAGAGCAACTGCATCAGACGGGTGAACTG 
CTCCGGCGCGATGCGTGCCCGCGGTTCGTCCAGCAGGGCCGGCTGGATGCCGGCGCGACGCAACAGGGCGGG 
GCCGTCCAGGCCTTGGCGCGTGGCCCCGCGCAACGCGGCGCGGACGAAATGGCTGGCGATGGTGCGCTCACG 
CATGGCGGCGTCCTTGTTGTTGGAACGGCGATGGTAGGGCGCCACCCGGAAGACGACAAgggtGGTGGCGGA 
CTCCCGCCATGCTCGCGCGGCACAGCCGGCCCGCCGGGCGGTAATCCGCCACGCTTAGCCCGCTATGCAATT 
TTCATTTTTTATTTAACTTGTTGA