ViewGene

Locus Name:
GeneID:
Location:

GeneID:5616
TrivialName: PA14_49670
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_49670
PAO1 Ortholog Locus:
Sequence Length:1389
Protein Length:462
Start: 4418882
Stop: 4420270
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGCCCGGGCTGGCCAGCCAGCCGTCGACCACCTTGTCCACCCCGTCCTGGCCGGCGGCGATGTTTTCGCC
GATCAGCCCGCCGCTGTAGCCGGCCAGCTCGGCGCGGTCGCCGGGGGTGCGGCCGTCGCGGTCGAGGTGGTC
GAAGAAGTTGCCGTTGGCCATCGCCCGCGAATGCGCTTCGGCGGCGCCGCCAAGGGTGGCGTTCCAGGCCAG
CGGCTGGGCCGCTGCGTAGGGCTTGCCACCGCACTGGCGGGCTTGCCCGCGGGCGGCGTTGATCCGTTCCAG
GAGCTTCTGCCCTTCCGCCTGCCAATCGCCCATGCCGCCGCGCAGCAATGGCCGGGCGAGGACGATGCGCCA
GTCGCGGTCCTGGCGGCTGACGCCGACGTCGACGAATTGCGGGTCGAGCACCACGCGGCAGAAGCTTTCCTG
CAGCGCCTTCATCGCCGCGCCGGCATCGCGCGGCCCGGAAAGGCTGATCGACTGCACGTTGACCATCGGGTA
GGCGGCCTGCGCCATCGCCTGCTGCAGGTCGCCGGCGGCATTCACCGGCAAGGCCAGGCGCGGATCGGCGGC
CAGCGGCGGCAGTTCGCCGCTGGCCTGGCCGCCGCAGGACTGCACCTGGCCACGGTAGGCGTTGATCGCCTC
GACCAGTTGCGCCTCGTCGGCGGCACTGGCGGCCGCTGCGAGCGCCAGTCCGAGCGTCAGTACGGCCAAACG
CGGGATGCTTGGGATTGCCATGGAAATCTCCTCGATCTGATGGCGCCTATGATGCGCGATTCCGCGGCGCGC
CGCCGCATTCGACCGGAACCCGGCGCCGGCGTTGCAGGCTCAGGCCGGCGCTTCGGCGAACGCCTCCACCAG
CCGCTCGATCACCGCGCGGACCCGCGCGGTGTGGCGCAGGTCCTTGTGGGTAACCATCCACACCTCGTATGG
CCGGCGTCGCTCACGCTGCGGCCAGACCCGCACCAGTCCGTCGCGCTCGCCCATGTACAGCGGCAGCTCGCA
GAGCCCCAGGCCACGCGCCAGGGCCTGGCGCACCATCATGTTGGAATTCACCGCGATGACCACCCGGCCGTC
GCGGATCGGCTCGCCGCCCAGGGTCAGTTCGCGCTGGCTGTGCCAATAGGGTTCGTACATCACCAGGTCGTG
GCCGCGGAAACGCTCGCCGGGCACCGGTACGCCGTTGCGCCGCAGGTAGTCCGCGGAAGCGAACAGGCCCAT
GGGCCAACTGGCGAGTTTTCTCAGGATCAAATCGGGATTTTCCGGCCGCAGGGTGCGAATCGCGATGTCGGT
CTCGCGCTTGGGCAGGTCGACCACGGCCGAAGCGCTGTCGAGCAGCACGCGGATATCCGGGTGTTCAAGGTG
CAGGCGGGCCAGGGCGGGTAG
Translation:
MARAGQPAVDHLVHPVLAGGDVFADQPAAVAGQLGAVAGGAAVAVEVVEEVAVGHRPRMRFGGAAKGGVPGQ
RLGRCVGLATALAGLPAGGVDPFQELLPFRLPIAHAAAQQWPGEDDAPVAVLAADADVDELRVEHHAAEAFL
QRLHRRAGIARPGKADRLHVDHRVGGLRHRLLQVAGGIHRQGQARIGGQRRQFAAGLAAAGLHLATVGVDRL
DQLRLVGGTGGRCERQSERQYGQTRDAWDCHGNLLDLMAPMMRDSAARRRIRPEPGAGVAGSGRRFGERLHQ
PLDHRADPRGVAQVLVGNHPHLVWPASLTLRPDPHQSVALAHVQRQLAEPQATRQGLAHHHVGIHRDDHPAV
ADRLAAQGQFALAVPIGFVHHQVVAAETLAGHRYAVAPQVVRGSEQAHGPTGEFSQDQIGIFRPQGANRDVG
LALGQVDHGRSAVEQHADIRVFKVQAGQGG*
AnnotationID:5618GeneID:5616
AnnotatorUID: danlee
Modification Date/Time: 2004-09-10 13:01:10
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15476
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28367
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48618How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 535026Stop: 533638
Length: 1389
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCCCGGGCTGGCCAGCCAGCCGTCGACCACCTTGTCCACCCCGTCCTGGCCGGCGGCGATGTTTTCGCC
GATCAGCCCGCCGCTGTAGCCGGCCAGCTCGGCGCGGTCGCCGGGGGTGCGGCCGTCGCGGTCGAGGTGGTC
GAAGAAGTTGCCGTTGGCCATCGCCCGCGAATGCGCTTCGGCGGCGCCGCCAAGGGTGGCGTTCCAGGCCAG
CGGCTGGGCCGCTGCGTAGGGCTTGCCACCGCACTGGCGGGCTTGCCCGCGGGCGGCGTTGATCCGTTCCAG
GAGCTTCTGCCCTTCCGCCTGCCAATCGCCCATGCCGCCGCGCAGCAATGGCCGGGCGAGGACGATGCGCCA
GTCGCGGTCCTGGCGGCTGACGCCGACGTCGACGAATTGCGGGTCGAGCACCACGCGGCAGAAGCTTTCCTG
CAGCGCCTTCATCGCCGCGCCGGCATCGCGCGGCCCGGAAAGGCTGATCGACTGCACGTTGACCATCGGGTA
GGCGGCCTGCGCCATCGCCTGCTGCAGGTCGCCGGCGGCATTCACCGGCAAGGCCAGGCGCGGATCGGCGGC
CAGCGGCGGCAGTTCGCCGCTGGCCTGGCCGCCGCAGGACTGCACCTGGCCACGGTAGGCGTTGATCGCCTC
GACCAGTTGCGCCTCGTCGGCGGCACTGGCGGCCGCTGCGAGCGCCAGTCCGAGCGTCAGTACGGCCAAACG
CGGGATGCTTGGGATTGCCATGGAAATCTCCTCGATCTGATGGCGCCTATGATGCGCGATTCCGCGGCGCGC
CGCCGCATTCGACCGGAACCCGGCGCCGGCGTTGCAGGCTCAGGCCGGCGCTTCGGCGAACGCCTCCACCAG
CCGCTCGATCACCGCGCGGACCCGCGCGGTGTGGCGCAGGTCCTTGTGGGTAACCATCCACACCTCGTATGG
CCGGCGTCGCTCACGCTGCGGCCAGACCCGCACCAGTCCGTCGCGCTCGCCCATGTACAGCGGCAGCTCGCA
GAGCCCCAGGCCACGCGCCAGGGCCTGGCGCACCATCATGTTGGAATTCACCGCGATGACCACCCGGCCGTC
GCGGATCGGCTCGCCGCCCAGGGTCAGTTCGCGCTGGCTGTGCCAATAGGGTTCGTACATCACCAGGTCGTG
GCCGCGGAAACGCTCGCCGGGCACCGGTACGCCGTTGCGCCGCAGGTAGTCCGCGGAAGCGAACAGGCCCAT
GGGCCAACTGGCGAGTTTTCTCAGGATCAAATCGGGATTTTCCGGCCGCAGGGTGCGAATCGCGATGTCGGT
CTCGCGCTTGGGCAGGTCGACCACGGCCGAAGCGCTGTCGAGCAGCACGCGGATATCCGGGTGTTCAAGGTG
CAGGCGGGCCAGGGCGGGTAG