ViewGene

Locus Name:
GeneID:
Location:

GeneID:5613
TrivialName: PA14_49830
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_49830
PAO1 Ortholog Locus:
Sequence Length:1797
Protein Length:598
Start: 4431699
Stop: 4433495
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22771.1| (AE005754) hypothetical protein [Caulobacter crescentus CB15]
Identities = 67/246 (27%), Positives = 103/246 (41%), Gaps = 47/246 (19%)
Sequence:
GTGAAGATCACCAGGCGGCGGGCGCCGGCGAGCAGTTCGACGACAGCGCGCATCTCGCTCCTCCGCTTACAG
CGCGGACAACGCGCGGTATTCGTCCTGGGCATGCTGGTCGGTCATGCCGCTGACGAAATCCTGGAGCATGCG
GCAGCGGTGGTAGAACTCCCACTGCCGCTGCAACGGGTCCTCCGCCACACCTTTCATGGCCTCCAGGTAAGC
CTTGATCTGCTGGCTCGGCAGGCGCCGAACCAGCAGTTGCGGATGCGGCGCGGCGGCCTGGCGACCTTCGGC
GAGGGCCTGGAACTCCTCGGCCGGCAGGCGCAGCAGCGGCGCGTAGAAATCCAGCAGGCCCTGGATGATGCG
GTAGCCCTGCAATTCCAGGGTTTCCACCTCCGGATGGCAGAACACCCATTCCATGGCCACGTCCTTGAACGT
CTGGACGATGGCGTGCGGCAGGCTGCCGTCCTCCATCAGCGCGCGGCCGAGGGTGCCGGCATGAACCGCTTC
GAGGTTGTCGATGAACTGCTGGGCGGCGTGCTGGACCAGCGGGTGGATCATTTTCACCCGCAGGCGGATGAA
GAATTCGCTGACCTTGTTGATCGGCTCCCGCTCGGCCTTTTCCAGCGAGTAGTCGACCATCCGCTGGAAGCT
CATGTTGTCCGCGTCGCCGGGAATCGGTGCGTCCGGCGAATGGTGGACGGCAAACTTCTTCACCAGCAGATC
CGCCAATTGACGGATGTCGAGGATGCCTTTTTCCACCGAGTCTTCGATATCGGCCAGGCAATAGGAGATATC
GTCGGCCGCTTCCATGATGTAGGCCACAGGGTGGCGAGTGCCCGGGCGCATGCCGAGGACTTGGCGCAGTTC
GTCGACGAAGGCTTCCTCGGAAAGATAGAAGCCCGGCTTCTTGTTCAGGTAGTGGTTCGCCGCTGCCTTGTC
CGGCTTCGGCTCGTAGGCCGGACGCACGTACTTGAGCAGGCCGGCGGTCTGCGTGTAGGTGAGGTTCAGGCG
CAGCAGCTTCACCACCAGGCGGATGGCCTGGGCGTTGCCTTCGAAATGCTTGAGGTCGGTGAGCATGCGCTG
CTGCAACAGGCCGTCGCCCTGGCCCGGCGGTACGCGGCGCTCGAACAGGGCGTCGAGATTGCGTTCGAACCA
ATCGTTGATGGCGTACTCGCCGAAATGACCGAACGGCGGATTGCCGACGTCGTGCATCAGGCAGGCCATTTC
CACCAGGCTTTCCAGCGCGCCTTCCAGCCCGTCCAGGCCGACCTCCGCGGCACGCGGGCCCAGTTGGCGGAA
CAGCGTGCGGACGATGAAACGCCCGGTCTGCTGCACTTCCAGGGAATGGGTCAGGCGGCTGCGCACCGCCGC
GTTGCGCTCCAGCGGGAAGACCTGGGTCTTCTGCTGCAGGCGCCGCACGGCGGCGGAATTGACGATGCGCCC
GCGGTCGCTTTCCAACTGGTAGACGATGTCTTGCAGATCGGTATTCCCGGCATGTCCGTAGGTTTCCCTGTC
ATGCGGACGCTGGCGGGATATCCGCTCCTTGAAATCCACGGCCCCTGGCATCTGGCGCTGTTCTCCACTCGG
TCGGCTGCGAACCCCGAGCCTAGCGCGTGGCGGCGGTTTAACCAAGGTCGCGACAATCCGTCCCACTACCGT
TCGCGGTCCGCCCTCTTCCCCGGGCGGCGGCAACTGGCAGAATACCCCGCTCGGCACCAGCGACCCCCGCCG
CAGAACGGGGGCGCCGCCGATCATGCGTGCGCCCATAGAAACAGGAACGTTCAGGGAGGTTCCGCATGA
Translation:
MKITRRRAPASSSTTARISLLRLQRGQRAVFVLGMLVGHAADEILEHAAAVVELPLPLQRVLRHTFHGLQVS
LDLLARQAPNQQLRMRRGGLATFGEGLELLGRQAQQRRVEIQQALDDAVALQFQGFHLRMAEHPFHGHVLER
LDDGVRQAAVLHQRAAEGAGMNRFEVVDELLGGVLDQRVDHFHPQADEEFADLVDRLPLGLFQRVVDHPLEA
HVVRVAGNRCVRRMVDGKLLHQQIRQLTDVEDAFFHRVFDIGQAIGDIVGRFHDVGHRVASARAHAEDLAQF
VDEGFLGKIEARLLVQVVVRRCLVRLRLVGRTHVLEQAGGLRVGEVQAQQLHHQADGLGVAFEMLEVGEHAL
LQQAVALARRYAALEQGVEIAFEPIVDGVLAEMTERRIADVVHQAGHFHQAFQRAFQPVQADLRGTRAQLAE
QRADDETPGLLHFQGMGQAAAHRRVALQREDLGLLLQAPHGGGIDDAPAVAFQLVDDVLQIGIPGMSVGFPV
MRTLAGYPLLEIHGPWHLALFSTRSAANPEPSAWRRFNQGRDNPSHYRSRSALFPGRRQLAEYPARHQRPPP
QNGGAADHACAHRNRNVQGGSA*
AnnotationID:5615GeneID:5613
AnnotatorUID: danlee
Modification Date/Time: 2004-08-20 16:04:39
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15473
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28361
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48615How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 522209Stop: 520413
Length: 1797
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGAAGATCACCAGGCGGCGGGCGCCGGCGAGCAGTTCGACGACAGCGCGCATCTCGCTCCTCCGCTTACAG
CGCGGACAACGCGCGGTATTCGTCCTGGGCATGCTGGTCGGTCATGCCGCTGACGAAATCCTGGAGCATGCG
GCAGCGGTGGTAGAACTCCCACTGCCGCTGCAACGGGTCCTCCGCCACACCTTTCATGGCCTCCAGGTAAGC
CTTGATCTGCTGGCTCGGCAGGCGCCGAACCAGCAGTTGCGGATGCGGCGCGGCGGCCTGGCGACCTTCGGC
GAGGGCCTGGAACTCCTCGGCCGGCAGGCGCAGCAGCGGCGCGTAGAAATCCAGCAGGCCCTGGATGATGCG
GTAGCCCTGCAATTCCAGGGTTTCCACCTCCGGATGGCAGAACACCCATTCCATGGCCACGTCCTTGAACGT
CTGGACGATGGCGTGCGGCAGGCTGCCGTCCTCCATCAGCGCGCGGCCGAGGGTGCCGGCATGAACCGCTTC
GAGGTTGTCGATGAACTGCTGGGCGGCGTGCTGGACCAGCGGGTGGATCATTTTCACCCGCAGGCGGATGAA
GAATTCGCTGACCTTGTTGATCGGCTCCCGCTCGGCCTTTTCCAGCGAGTAGTCGACCATCCGCTGGAAGCT
CATGTTGTCCGCGTCGCCGGGAATCGGTGCGTCCGGCGAATGGTGGACGGCAAACTTCTTCACCAGCAGATC
CGCCAATTGACGGATGTCGAGGATGCCTTTTTCCACCGAGTCTTCGATATCGGCCAGGCAATAGGAGATATC
GTCGGCCGCTTCCATGATGTAGGCCACAGGGTGGCGAGTGCCCGGGCGCATGCCGAGGACTTGGCGCAGTTC
GTCGACGAAGGCTTCCTCGGAAAGATAGAAGCCCGGCTTCTTGTTCAGGTAGTGGTTCGCCGCTGCCTTGTC
CGGCTTCGGCTCGTAGGCCGGACGCACGTACTTGAGCAGGCCGGCGGTCTGCGTGTAGGTGAGGTTCAGGCG
CAGCAGCTTCACCACCAGGCGGATGGCCTGGGCGTTGCCTTCGAAATGCTTGAGGTCGGTGAGCATGCGCTG
CTGCAACAGGCCGTCGCCCTGGCCCGGCGGTACGCGGCGCTCGAACAGGGCGTCGAGATTGCGTTCGAACCA
ATCGTTGATGGCGTACTCGCCGAAATGACCGAACGGCGGATTGCCGACGTCGTGCATCAGGCAGGCCATTTC
CACCAGGCTTTCCAGCGCGCCTTCCAGCCCGTCCAGGCCGACCTCCGCGGCACGCGGGCCCAGTTGGCGGAA
CAGCGTGCGGACGATGAAACGCCCGGTCTGCTGCACTTCCAGGGAATGGGTCAGGCGGCTGCGCACCGCCGC
GTTGCGCTCCAGCGGGAAGACCTGGGTCTTCTGCTGCAGGCGCCGCACGGCGGCGGAATTGACGATGCGCCC
GCGGTCGCTTTCCAACTGGTAGACGATGTCTTGCAGATCGGTATTCCCGGCATGTCCGTAGGTTTCCCTGTC
ATGCGGACGCTGGCGGGATATCCGCTCCTTGAAATCCACGGCCCCTGGCATCTGGCGCTGTTCTCCACTCGG
TCGGCTGCGAACCCCGAGCCTAGCGCGTGGCGGCGGTTTAACCAAGGTCGCGACAATCCGTCCCACTACCGT
TCGCGGTCCGCCCTCTTCCCCGGGCGGCGGCAACTGGCAGAATACCCCGCTCGGCACCAGCGACCCCCGCCG
CAGAACGGGGGCGCCGCCGATCATGCGTGCGCCCATAGAAACAGGAACGTTCAGGGAGGTTCCGCATGA