ViewGene

Locus Name:
GeneID:
Location:

GeneID:5607
TrivialName: PA14_50090
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_50090
PAO1 Ortholog Locus:
Sequence Length:1644
Protein Length:547
Start: 4452492
Stop: 4454135
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAF22882.1| (AF065159) adenylate cyclases-like protein [Bradyrhizobium japonicum]
Identities = 96/344 (27%), Positives = 127/344 (36%), Gaps = 81/344 (23%)
Sequence:
TTGCTGGCCATGTCCACCACCGGCGCCAGCCGCGCCGCGCGCTTCTCCATGCCTCAGCGCGCCTCAGGCCTG
CCCGCCGGCGAGCAGGCTCGCCAGCCGCGCACGGCTTTCCGCCAGGCTTTCGCTTTCGTCGAGGCCCTGGCG
CAGGAACTGGCGCATGACCGGGAAGCGAGCGATGGCCAGGTCGGTCTCGGGATCGCCGCCGGCCACGTAGGC
ACCGACGCTGATCAGATCGCGACTCTGCTGGTAGCGCGACCAGAGCTGCTTGAAGCGCTGGGCGTCGCGCAG
GTGCTCGGCCTCGACCACCTGCGGCATCACCCGGCTGATCGAAGCTTCGATATCGATGGCCGGATAGTGGCC
TTCCTCGGCCAACCGCCGGGACAATACGAAGTGCCCGTCGAGCACGCCGCGAGCGGCGTCGGCGATCGGGTC
CTGCTGGTCGTCGCCCTCGGAGAGCACGGTGTAGAACGCGGTGATCGAGCCGCCACCGGCTTCGGCATTGCC
GGCGCGTTCCACCAGCTTCGGCAGCTTGGCGAACACCGATGGCGGATACCCCTTGGTCGCCGGTGGCTCGCC
GATGGCCAGGGCGATCTCGCGCTGGGCCTGGGCGTAGCGGGTCAGCGAGTCCATCAGCAGCAATACGTTCTT
GCCCTTGTCGCGGAAGTACTCGGCGATCCGCGTGCAGTATTGCGCGGCACGCAGGCGCATCAGCGGCGCGTC
GTCGGCCGGCGAGGCGACCACCACGGAGCGCTTGAGGCCTTCCTCGCCGAGGATCTCGTCGATGAACTCCTT
CACCTCGCGGCCCCGCTCGCCGATCAGACCGACGACGATGATGTCGGCCCTGGTGAAACGGGTCATCATCCC
CAGCAGCACCGACTTGCCCACCCCGGTACCGGCGAACAGGCCGAGGCGCTGGCCGCGGCCGACCGTGAGCAG
GCCATTGATCGAGCGGATGCCGACGTCGAGAGGTTCGCTGATCGGGTGGCGCTTGAGCGGGTTGATCGTCGG
GCCGTCCATCGGCACCCAGTCTTCGGCGCGCATCCCGCCCTTGCCGTCGAGGGCGCGGCCGGCGCCGTCGAG
CACGCGGCCGAGCATCGACATGCCCATCGGCAGGCGCCCGGTGTCCGGCAGCGGCACGACCCGCGCGCCGGG
CGCGATGCCGGCGAGGCTGCCGACCGGCATCAGGTACACCTTGCTACCGGAAAAGCCCATCACTTCGGCCTC
CACCTGCACCGGGTGGTAGCCGCTTTCGTTGATCACGTTGCAGCGGCTGCCGACCGCGGCCTGCAAGCCCTC
GGCTTCGAGGGTCAGGCCGACCATGCGCAGCAGGCGGCCCTCGACCACCGGCTGCGCCGGCAGCGAGACAGC
CTCGGTGTAGCCCTCCAGGCGCCTGGCGAAACTGGTTCGCTCAAGGCGCATCGACGTCTCCGGGGGCGTCGA
GGTCGATCCGGATGTCGCTGGCCAGCGGATGGGTCGCCTGTTCGCGCTGTTGCTCGAACAGTTGCTTCACTG
CCTGCGCCAGGCGCGTCTCGATGGTCGCGTCGATGCGACTGTGCTCGGTCTCGATGCGGCAGCCGCCGGGCA
GCAACGAATCGTCCTCGAGAATCCGCCAGCTCTCTTCGTGGCGCTCGCGCAGCGCCTTGA
Translation:
MLAMSTTGASRAARFSMPQRASGLPAGEQARQPRTAFRQAFAFVEALAQELAHDREASDGQVGLGIAAGHVG
TDADQIATLLVARPELLEALGVAQVLGLDHLRHHPADRSFDIDGRIVAFLGQPPGQYEVPVEHAASGVGDRV
LLVVALGEHGVERGDRAATGFGIAGAFHQLRQLGEHRWRIPLGRRWLADGQGDLALGLGVAGQRVHQQQYVL
ALVAEVLGDPRAVLRGTQAHQRRVVGRRGDHHGALEAFLAEDLVDELLHLAAPLADQTDDDDVGPGETGHHP
QQHRLAHPGTGEQAEALAAADREQAIDRADADVERFADRVALERVDRRAVHRHPVFGAHPALAVEGAAGAVE
HAAEHRHAHRQAPGVRQRHDPRAGRDAGEAADRHQVHLATGKAHHFGLHLHRVVAAFVDHVAAAADRGLQAL
GFEGQADHAQQAALDHRLRRQRDSLGVALQAPGETGSLKAHRRLRGRRGRSGCRWPADGSPVRAVARTVASL
PAPGASRWSRRCDCARSRCGSRRAATNRPRESASSLRGARAAP*
AnnotationID:5609GeneID:5607
AnnotatorUID: danlee
Modification Date/Time: 2004-06-21 16:04:03
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15470
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28351
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48609How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 501416Stop: 499773
Length: 1644
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCTGGCCATGTCCACCACCGGCGCCAGCCGCGCCGCGCGCTTCTCCATGCCTCAGCGCGCCTCAGGCCTG
CCCGCCGGCGAGCAGGCTCGCCAGCCGCGCACGGCTTTCCGCCAGGCTTTCGCTTTCGTCGAGGCCCTGGCG
CAGGAACTGGCGCATGACCGGGAAGCGAGCGATGGCCAGGTCGGTCTCGGGATCGCCGCCGGCCACGTAGGC
ACCGACGCTGATCAGATCGCGACTCTGCTGGTAGCGCGACCAGAGCTGCTTGAAGCGCTGGGCGTCGCGCAG
GTGCTCGGCCTCGACCACCTGCGGCATCACCCGGCTGATCGAAGCTTCGATATCGATGGCCGGATAGTGGCC
TTCCTCGGCCAACCGCCGGGACAATACGAAGTGCCCGTCGAGCACGCCGCGAGCGGCGTCGGCGATCGGGTC
CTGCTGGTCGTCGCCCTCGGAGAGCACGGTGTAGAACGCGGTGATCGAGCCGCCACCGGCTTCGGCATTGCC
GGCGCGTTCCACCAGCTTCGGCAGCTTGGCGAACACCGATGGCGGATACCCCTTGGTCGCCGGTGGCTCGCC
GATGGCCAGGGCGATCTCGCGCTGGGCCTGGGCGTAGCGGGTCAGCGAGTCCATCAGCAGCAATACGTTCTT
GCCCTTGTCGCGGAAGTACTCGGCGATCCGCGTGCAGTATTGCGCGGCACGCAGGCGCATCAGCGGCGCGTC
GTCGGCCGGCGAGGCGACCACCACGGAGCGCTTGAGGCCTTCCTCGCCGAGGATCTCGTCGATGAACTCCTT
CACCTCGCGGCCCCGCTCGCCGATCAGACCGACGACGATGATGTCGGCCCTGGTGAAACGGGTCATCATCCC
CAGCAGCACCGACTTGCCCACCCCGGTACCGGCGAACAGGCCGAGGCGCTGGCCGCGGCCGACCGTGAGCAG
GCCATTGATCGAGCGGATGCCGACGTCGAGAGGTTCGCTGATCGGGTGGCGCTTGAGCGGGTTGATCGTCGG
GCCGTCCATCGGCACCCAGTCTTCGGCGCGCATCCCGCCCTTGCCGTCGAGGGCGCGGCCGGCGCCGTCGAG
CACGCGGCCGAGCATCGACATGCCCATCGGCAGGCGCCCGGTGTCCGGCAGCGGCACGACCCGCGCGCCGGG
CGCGATGCCGGCGAGGCTGCCGACCGGCATCAGGTACACCTTGCTACCGGAAAAGCCCATCACTTCGGCCTC
CACCTGCACCGGGTGGTAGCCGCTTTCGTTGATCACGTTGCAGCGGCTGCCGACCGCGGCCTGCAAGCCCTC
GGCTTCGAGGGTCAGGCCGACCATGCGCAGCAGGCGGCCCTCGACCACCGGCTGCGCCGGCAGCGAGACAGC
CTCGGTGTAGCCCTCCAGGCGCCTGGCGAAACTGGTTCGCTCAAGGCGCATCGACGTCTCCGGGGGCGTCGA
GGTCGATCCGGATGTCGCTGGCCAGCGGATGGGTCGCCTGTTCGCGCTGTTGCTCGAACAGTTGCTTCACTG
CCTGCGCCAGGCGCGTCTCGATGGTCGCGTCGATGCGACTGTGCTCGGTCTCGATGCGGCAGCCGCCGGGCA
GCAACGAATCGTCCTCGAGAATCCGCCAGCTCTCTTCGTGGCGCTCGCGCAGCGCCTTGA