ViewGene

Locus Name:
GeneID:
Location:

GeneID:5605
TrivialName: PA14_50150
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_50150
PAO1 Ortholog Locus:
Sequence Length:1755
Protein Length:584
Start: 4455814
Stop: 4457568
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: emb|CAA19786.1| (AL939128) hypothetical protein [Streptomyces coelicolor A3(2)]
Identities = 54/205 (26%), Positives = 78/205 (38%), Gaps = 17/205 (8%)
Sequence:
TTGCGCATCATACCCCTCCGTGGGGCTCGGCAGGAGGATGCTCGACGGCCCGCCGATGCTCACCCGATCGTC
GGCCAGCGAGCCTTCCAGGCCACTCTCGCCCAGCGCCAGGTCGCCGTCGCGACCGCCGCCGCCGGCCAGCGA
CTTGCCCTTGCCGCCGCCGGTGATGTTGCTCAGCACCGGACGCAGCACGCCGAACACCAGGACCAGGATGAA
CAGCACGCCGAGCACCTGCTTGACGATGTCCCAGAACCACGGCTGCGAGTAGAACGGAATGCTGTCGATCTC
TTCGGCCTGGGCCGGGGCGAACGGCGCGTTGATCACGCTGACGCTGTCGCCGCGGCTGGCGTCGTAGCCCAC
CGAATCCTGTACCAGGCGGGTGAAGCGCGCCAGTTCGTCGGCGCTCCAGGGCTGGTGGCTGACCTCGCCGGT
CTTCGCGTCGACCTTCATCTGGTCGTCCAGCACCACCGCCACCGACAGTCGGCGCAAGCGCCCCTGCTGCTG
CTTGGTGTAGCTGATCGAGCGGTCCAGTTCATAGTTGCGGGTAGTCTGGTCGCGCTTGTCGGTCGGGTACGG
CGCCAGCTCCGGCTTGCCGGTCTTCGGATCGATGATGGTCTGGCCGTTGGCGTCCTTCAGCGGCTGGCCCGG
CGCGACGTAGTCGGCCGGCGCGCTGGCGGTGGCCTGCTGCGGCGCGCTGGCCGGGCCCGGCGGCTGGTTCGA
CAGCGCCCCCGGCACGCCCTGCGGGCCGGACGAATTCTGCCGTTCCTCGTTGTTGCGTTGCTCGCTGCGCAG
GGCCGGCTGGTCCGGGTTGTACATCTCCGAGGTCGACTCGACCGCGCTGAAGTCGACGTCGGCGGACACCTC
GGCCTTGTAGCGACCGTTGCCCAGCACAGGTTGCAGGATATTGTGCACGCGCTGGGTGAGCAGGCCTTCCAT
GCGCCGGGTGAAGTCGAACTGCTTGCCGGCCATGGTCAGCTCGGAGAGCTCCTGCTGGTCGGAGAGCAGGTT
GCCCTTCTGGTCGACCACGGTGACCTGCGACTTGTCCAGCTCCGGCACACTGGTGGCGACCAGGTTGACGAT
CGCCATCACCTGGCTCGGCTCCAGGCTGCGCCCCGGATACAGCTCGACCAGCACCGAGGCGCTGGGCTTGCG
GTCGTCGCGGACGAACACCGAACTCTTCGGGATCGCCAGGTGCACGCGGGCGGCCTTGACGTTGTTCAGGCT
CGACACGGTGCGCGCCAGCTCGCCTTCCAGGCCGCGGCGATAGTTGGTGGCTTCCATGAACTGGCTGGTGCC
CAGCGCCTGTTCCTTGTCGAGGATCTCGAAACCGACGTTGTTGTCGGTCGGCGCCACGCCGGCGGAGGCCAC
CTTCATGCGTGCCCGGCCGAGGTCGTCGGCCTTGACCAGCAGCGCGCCGGAGTTGGGTTCGACCTTGTAGGG
AATGTCCGCCGCGGTCAGCGCTTCCACCACACGGTTCGCGTCGACCCCGTTGAGGCTGCCATAGAGCGGCTT
GTAGTCCGGCTGCTGGGACCAGAGCACGACGGCGAAGCCGATCGCCACGCTGGCGGCGAGACCGACCAGCAG
GCCGATCTGGCGCAGCATGGTCATCTCGGAAAGGTTGTCGAGGAACGACAGTCCCGGGAAGGATTTCTTCAG
CATCCCGGCACCGCCGCTCTTGGCGGGAACCTGGCTGTCGATCAGTGCATCGGCCATGAACTAGTTATCCTC
GCGCCGCTCAGACCGGCATCTGCATGA
Translation:
MRIIPLRGARQEDARRPADAHPIVGQRAFQATLAQRQVAVATAAAGQRLALAAAGDVAQHRTQHAEHQDQDE
QHAEHLLDDVPEPRLRVERNAVDLFGLGRGERRVDHADAVAAAGVVAHRILYQAGEARQFVGAPGLVADLAG
LRVDLHLVVQHHRHRQSAQAPLLLLGVADRAVQFIVAGSLVALVGRVRRQLRLAGLRIDDGLAVGVLQRLAR
RDVVGRRAGGGLLRRAGRARRLVRQRPRHALRAGRILPFLVVALLAAQGRLVRVVHLRGRLDRAEVDVGGHL
GLVATVAQHRLQDIVHALGEQAFHAPGEVELLAGHGQLGELLLVGEQVALLVDHGDLRLVQLRHTGGDQVDD
RHHLARLQAAPRIQLDQHRGAGLAVVADEHRTLRDRQVHAGGLDVVQARHGARQLAFQAAAIVGGFHELAGA
QRLFLVEDLETDVVVGRRHAGGGHLHACPAEVVGLDQQRAGVGFDLVGNVRRGQRFHHTVRVDPVEAAIERL
VVRLLGPEHDGEADRHAGGETDQQADLAQHGHLGKVVEERQSREGFLQHPGTAALGGNLAVDQCIGHELVIL
APLRPASA*
AnnotationID:5607GeneID:5605
AnnotatorUID: danlee
Modification Date/Time: 2004-06-21 16:04:22
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15468
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28347
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48607How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 498094Stop: 496340
Length: 1755
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGCATCATACCCCTCCGTGGGGCTCGGCAGGAGGATGCTCGACGGCCCGCCGATGCTCACCCGATCGTC
GGCCAGCGAGCCTTCCAGGCCACTCTCGCCCAGCGCCAGGTCGCCGTCGCGACCGCCGCCGCCGGCCAGCGA
CTTGCCCTTGCCGCCGCCGGTGATGTTGCTCAGCACCGGACGCAGCACGCCGAACACCAGGACCAGGATGAA
CAGCACGCCGAGCACCTGCTTGACGATGTCCCAGAACCACGGCTGCGAGTAGAACGGAATGCTGTCGATCTC
TTCGGCCTGGGCCGGGGCGAACGGCGCGTTGATCACGCTGACGCTGTCGCCGCGGCTGGCGTCGTAGCCCAC
CGAATCCTGTACCAGGCGGGTGAAGCGCGCCAGTTCGTCGGCGCTCCAGGGCTGGTGGCTGACCTCGCCGGT
CTTCGCGTCGACCTTCATCTGGTCGTCCAGCACCACCGCCACCGACAGTCGGCGCAAGCGCCCCTGCTGCTG
CTTGGTGTAGCTGATCGAGCGGTCCAGTTCATAGTTGCGGGTAGTCTGGTCGCGCTTGTCGGTCGGGTACGG
CGCCAGCTCCGGCTTGCCGGTCTTCGGATCGATGATGGTCTGGCCGTTGGCGTCCTTCAGCGGCTGGCCCGG
CGCGACGTAGTCGGCCGGCGCGCTGGCGGTGGCCTGCTGCGGCGCGCTGGCCGGGCCCGGCGGCTGGTTCGA
CAGCGCCCCCGGCACGCCCTGCGGGCCGGACGAATTCTGCCGTTCCTCGTTGTTGCGTTGCTCGCTGCGCAG
GGCCGGCTGGTCCGGGTTGTACATCTCCGAGGTCGACTCGACCGCGCTGAAGTCGACGTCGGCGGACACCTC
GGCCTTGTAGCGACCGTTGCCCAGCACAGGTTGCAGGATATTGTGCACGCGCTGGGTGAGCAGGCCTTCCAT
GCGCCGGGTGAAGTCGAACTGCTTGCCGGCCATGGTCAGCTCGGAGAGCTCCTGCTGGTCGGAGAGCAGGTT
GCCCTTCTGGTCGACCACGGTGACCTGCGACTTGTCCAGCTCCGGCACACTGGTGGCGACCAGGTTGACGAT
CGCCATCACCTGGCTCGGCTCCAGGCTGCGCCCCGGATACAGCTCGACCAGCACCGAGGCGCTGGGCTTGCG
GTCGTCGCGGACGAACACCGAACTCTTCGGGATCGCCAGGTGCACGCGGGCGGCCTTGACGTTGTTCAGGCT
CGACACGGTGCGCGCCAGCTCGCCTTCCAGGCCGCGGCGATAGTTGGTGGCTTCCATGAACTGGCTGGTGCC
CAGCGCCTGTTCCTTGTCGAGGATCTCGAAACCGACGTTGTTGTCGGTCGGCGCCACGCCGGCGGAGGCCAC
CTTCATGCGTGCCCGGCCGAGGTCGTCGGCCTTGACCAGCAGCGCGCCGGAGTTGGGTTCGACCTTGTAGGG
AATGTCCGCCGCGGTCAGCGCTTCCACCACACGGTTCGCGTCGACCCCGTTGAGGCTGCCATAGAGCGGCTT
GTAGTCCGGCTGCTGGGACCAGAGCACGACGGCGAAGCCGATCGCCACGCTGGCGGCGAGACCGACCAGCAG
GCCGATCTGGCGCAGCATGGTCATCTCGGAAAGGTTGTCGAGGAACGACAGTCCCGGGAAGGATTTCTTCAG
CATCCCGGCACCGCCGCTCTTGGCGGGAACCTGGCTGTCGATCAGTGCATCGGCCATGAACTAGTTATCCTC
GCGCCGCTCAGACCGGCATCTGCATGA