ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5602

TrivialName: PA14_50210

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_50210

PAO1 Ortholog Locus:

Sequence Length: 1563

Protein Length: 520

Start: 4460842

Stop: 4462404

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAC45363.1| (U56832) ORF5; no significant similarity with known prokaryotic or eukaryotic proteins [Aeromonas hydrophila] Identities = 63/237 (26%), Positives = 91/237 (38%), Gaps = 16/237 (6%)

Sequence:

TTGAAAATCAAAGCGTTGCGAAACGACCTGTCAATCATCCGACAGGTCGTCGTCGCGCCGGCTCATGCCGTA
CTTGCGCATCTTCTCCACCAGCGTGGTGCGGCGGATGCGCAGGCGTTCGGCGGCCCGCGCGACCACTCCGCC
GGCATCGTCGAGGGCCTGCTGGATCAGGCCCTGCTCGAGGTTGGCCAGGTAGTCCTTGAGGTCCAGGCCTTC
GGCCGGCAGCATCGCCGGCGCGTCCATTCCCGGCAGCCCAGCGTTGATCGCCGCGCGCTCTTCCAGCTCTTC
GCGCAGGCTGCTGGCGAGTTGCTCGTCCTCGTCGTCGACATGGCGGAATTTCTTCGGCAGTTCGCCGACCCC
GATCACCCCGTAGGGATGCATGATCGCCAGGCGCTCCACCAGGTTCGCCAGTTCGCGGACGTTGCCCGGCCA
GTCGTGGCGGCAGAGCGACATGATCGCCGCCGAGTTGAAGCGGATCGACCCGCGCTTCTCGTGCTCCATCCG
CGAGATCAGTTCGTTGAGCAGCAGGGCGATGTCTTCCACCCGCTCGCGCAGCGGCGCCATCTCGATGGGGAA
TACGTTGAGGCGGTAGTAGAGGTCTTCGCGGAAAGTGCCGTCCTCGATCATCTTCTCGAGGTTCTTGTGGGT
CGCGGCGATGATCCGCACGTCGACGTTCTGCGTCTTGTTGCTGCCGACCCTTTCGAAGGTGCGCTCCTGCAG
CACGCGCAGCAGCTTGACCTGCATCGGCAGCGGCATGTCGCCGATCTCGTCGAGGAACAGGGTGCCGCCGTT
GGCCAGCTCGAAGCGTCCGGCACGACTGGTGATGGCACCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGTTC
GCTTTCCAGCAGTTCCGCCGGGATCGCCCCGCAGTTCACCGGGACGAAGGGCCCCTCGCGGCGCTTGGAATG
GTAATGCAGGTTGCGCGCCACCACTTCCTTGCCGGTGCCGGACTCGCCGAGGATCAGCACGCTGGCATCGGT
ATCGGCGACCTGCTGCATCATCTGCCGCACCTGCTGGATCGCCCGGCTGGTGCCGACCAGGCTGCGGAACAG
GTTCGGCTCGCGGGAGCGGCCGCGCTCGCGGGCCTGGTCGTACATCTCGCGGTAGACCTGGGCGCGATGCAG
GGAATCGAGCAGCTTGTTGTAGCTGGGCGGCATCTCCAGGCTGGCGAGCACCCGGCGGCGCAGCTCCTCCGG
CCAGTCGGCCGGGGCCGGCTCGCCGATCAGCAGGATCGGCAGGTACTCGTCCCAACTGGCCAGTTGCTTCAG
CAGCTCTACCGCCCCGCCCTTCGACTCGACGCTGCCGAGCAGCACGCACAGGGCTTCGCGACTGTTGCTCAG
GCCCGCCGCTACCTCTCGCCAATCCTCGCTGTTGCAGGTCAGCTGATCTTCGCCGAGGAAGTTGAGAATGAC
TGCCAGGTCGCGACTGCGATCGAGATTGTCGTCAATCAGCAAGAGTTTGGTTTCGCGCCACATTTTGATCAG
CTGCCTTGCATCGAATGGGTCTCGCTCGACCCGAAAGAGGGCTGGGACTAA

Translation:

MKIKALRNDLSIIRQVVVAPAHAVLAHLLHQRGAADAQAFGGPRDHSAGIVEGLLDQALLEVGQVVLEVQAF
GRQHRRRVHSRQPSVDRRALFQLFAQAAGELLVLVVDMAEFLRQFADPDHPVGMHDRQALHQVRQFADVARP
VVAAERHDRRRVEADRPALLVLHPRDQFVEQQGDVFHPLAQRRHLDGEYVEAVVEVFAESAVLDHLLEVLVG
RGDDPHVDVLRLVAADPFEGALLQHAQQLDLHRQRHVADLVEEQGAAVGQLEASGTTGDGTGEGALLVAEQF
AFQQFRRDRPAVHRDEGPLAALGMVMQVARHHFLAGAGLAEDQHAGIGIGDLLHHLPHLLDRPAGADQAAEQ
VRLAGAAALAGLVVHLAVDLGAMQGIEQLVVAGRHLQAGEHPAAQLLRPVGRGRLADQQDRQVLVPTGQLLQ
QLYRPALRLDAAEQHAQGFATVAQARRYLSPILAVAGQLIFAEEVENDCQVATAIEIVVNQQEFGFAPHFDQ
LPCIEWVSLDPKEGWD*

AnnotationID:5604 GeneID:5602

AnnotatorUID: danlee

Modification Date/Time: 2004-05-26 22:10:45

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15462

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28341