ViewGene

Locus Name:
GeneID:
Location:

GeneID:5600
TrivialName: PA14_50260
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_50260
PAO1 Ortholog Locus:
Sequence Length:1671
Protein Length:556
Start: 4463405
Stop: 4465075
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK25017.1| (AE005968) hypothetical protein [Caulobacter crescentus CB15]
Identities = 122/416 (29%), Positives = 160/416 (38%), Gaps = 71/416 (17%)
Sequence:
TTGCCGGCGATACGGCCTTGGGCCGCACCGCCAGCCAGCGGATCAGGTCTTCTTGCCGCTGCCGTAAGGCAG
GCTGGCGAGGTTGTCCGTGATGCTCTTCTGACGCTTGGTCATTTCATCCTGCATCGCGGAAAGCAGGTTGAA
CTGGGTGGTCAGTTTCTCCTGCAGCGCCGCCAGCCGCTTGGCCAGATCAGCCTTCTGCGTGTCGACGTTGCT
GAGGGTCTTCTGCAAGGTCGTGGTGCGCTGGTCGAGAATACCCTGGGCGTCGGTGTAGGGCTTCATCTTATC
GCCCAGGCGCTTGGCCAGGCCGGTATCGCCGGTGAAGTAGCTGGCAACGCCTTCGAAGTCGGCGCTGATCGC
CTTGTCGAGCTTCTTCTCGTCGATCTCCAGCGTGCCGTCCTTGGTCGTGGTGATTCCGAGGGCGGCAAGGTT
GCGCACGCTGCCGTTTTCGTTGGAGGCGATCAGTTCGCTGCGCATGGTGTTGACCAGCGCACGGACGGAGGC
ATCGCCGAGCAGAGCTCCGGTGACCGGAGTCTTGTCTTCGCCAACCTTGGTCACCACGGTCTGTTCGTTGAT
GAACTTGGTGAGGGTGTTGTAGGCCTCGACGAACTTCTTGACGTTCTCCTTCACCCCGGCATCGTCCCGGGA
AACAGTCAGGGTGATCGGCTTGCCGGCTTCGGTGACGGCTTTCACGTCGAAGCTGACGCCGTCAATGACGTC
GCTCACGCTGTTGGAGGCGATGCTGCGCTTGAGGCCGTCGACGGTGATTTCACCGTTTGCCGCCTTGGTCAC
GTAGCCGGCAGCGGCGCCGTCGCTGAGCTTGGGAGCCGTCGCGGGATCGAAAGCCAGTTGGCTGAGCGACGT
ATTGCCGCCGCTGCCGTCATCGCTGACCTCGACCTTGATGTCCTTGCCGTCGCCGGTCTTGGTGCTGCTCAG
CACCAGACGCGAGCCGGAGTTGTCGGTAATGATGGTGGCGCTGACGCCCGCTTCCTTGCCGGCCTGATTGAT
GGCATCGCGCATGCCGGCCAGCGTGTTGTTGCTGGAGTCGACGGTGATCGCCGGCAGCTTGGTGTCGCCGAC
GGAGATGTTCAGCGTACCGCTGTTGAACTTGGCATTGGCCGGATCGGCGATGGCCTGCAGGGCAATCTTGCT
GCTGGTGGCAAGGCTGTTGACCTGGATCTGGTAGGTGCCAGCCACCGCGCTCTGGGTGGCGCTCGCCTTGAG
AATGTCTTCGTTGGAAGACTTGGCGGTGCGCGCCATGAACACAGCATTGCTGTTCAGCGCCGTGAGCGCCGT
CTGGAACGCGCTGATCGCACTCTTGAACTGGCCCAGGGCAGTGAGACGAGTAGTGGTGGTCTTCTCCAGGGT
GGCGAGCTGGTTGGTCTTAGCCGCGCCCTCCAGGTTCACCATCTTGTTCACCAGATCGGTGTAATCGGTCGA
GCCTACTCCTATCGAGATACCGGCCATAATCCATCTCCGTCAAAAAACCGTGCATGTACTGCCCTATCCCTT
CGACAGGGCAAGCACCATGCCAAGTCGTTCAACCCGCGCGTCAGGCGCGGGTTTCGAACAGGACACTGCGTA
CGTCGTCGAGCCGGGCGGCAAGTTTTAGTACTTCTTCGGAAGGGATTTGCCGCACGACTTCGCCCGAGTCAC
CGTCGATCACCTTGA
Translation:
MPAIRPWAAPPASGSGLLAAAVRQAGEVVRDALLTLGHFILHRGKQVELGGQFLLQRRQPLGQISLLRVDVA
EGLLQGRGALVENTLGVGVGLHLIAQALGQAGIAGEVAGNAFEVGADRLVELLLVDLQRAVLGRGDSEGGKV
AHAAVFVGGDQFAAHGVDQRTDGGIAEQSSGDRSLVFANLGHHGLFVDELGEGVVGLDELLDVLLHPGIVPG
NSQGDRLAGFGDGFHVEADAVNDVAHAVGGDAALEAVDGDFTVCRLGHVAGSGAVAELGSRRGIESQLAERR
IAAAAVIADLDLDVLAVAGLGAAQHQTRAGVVGNDGGADARFLAGLIDGIAHAGQRVVAGVDGDRRQLGVAD
GDVQRTAVELGIGRIGDGLQGNLAAGGKAVDLDLVGASHRALGGARLENVFVGRLGGARHEHSIAVQRRERR
LERADRTLELAQGSETSSGGLLQGGELVGLSRALQVHHLVHQIGVIGRAYSYRDTGHNPSPSKNRACTALSL
RQGKHHAKSFNPRVRRGFRTGHCVRRRAGRQVLVLLRKGFAARLRPSHRRSP*
AnnotationID:5602GeneID:5600
AnnotatorUID: danlee
Modification Date/Time: 2004-05-21 11:11:25
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15460
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28337
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48602How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 490503Stop: 488833
Length: 1671
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCCGGCGATACGGCCTTGGGCCGCACCGCCAGCCAGCGGATCAGGTCTTCTTGCCGCTGCCGTAAGGCAG
GCTGGCGAGGTTGTCCGTGATGCTCTTCTGACGCTTGGTCATTTCATCCTGCATCGCGGAAAGCAGGTTGAA
CTGGGTGGTCAGTTTCTCCTGCAGCGCCGCCAGCCGCTTGGCCAGATCAGCCTTCTGCGTGTCGACGTTGCT
GAGGGTCTTCTGCAAGGTCGTGGTGCGCTGGTCGAGAATACCCTGGGCGTCGGTGTAGGGCTTCATCTTATC
GCCCAGGCGCTTGGCCAGGCCGGTATCGCCGGTGAAGTAGCTGGCAACGCCTTCGAAGTCGGCGCTGATCGC
CTTGTCGAGCTTCTTCTCGTCGATCTCCAGCGTGCCGTCCTTGGTCGTGGTGATTCCGAGGGCGGCAAGGTT
GCGCACGCTGCCGTTTTCGTTGGAGGCGATCAGTTCGCTGCGCATGGTGTTGACCAGCGCACGGACGGAGGC
ATCGCCGAGCAGAGCTCCGGTGACCGGAGTCTTGTCTTCGCCAACCTTGGTCACCACGGTCTGTTCGTTGAT
GAACTTGGTGAGGGTGTTGTAGGCCTCGACGAACTTCTTGACGTTCTCCTTCACCCCGGCATCGTCCCGGGA
AACAGTCAGGGTGATCGGCTTGCCGGCTTCGGTGACGGCTTTCACGTCGAAGCTGACGCCGTCAATGACGTC
GCTCACGCTGTTGGAGGCGATGCTGCGCTTGAGGCCGTCGACGGTGATTTCACCGTTTGCCGCCTTGGTCAC
GTAGCCGGCAGCGGCGCCGTCGCTGAGCTTGGGAGCCGTCGCGGGATCGAAAGCCAGTTGGCTGAGCGACGT
ATTGCCGCCGCTGCCGTCATCGCTGACCTCGACCTTGATGTCCTTGCCGTCGCCGGTCTTGGTGCTGCTCAG
CACCAGACGCGAGCCGGAGTTGTCGGTAATGATGGTGGCGCTGACGCCCGCTTCCTTGCCGGCCTGATTGAT
GGCATCGCGCATGCCGGCCAGCGTGTTGTTGCTGGAGTCGACGGTGATCGCCGGCAGCTTGGTGTCGCCGAC
GGAGATGTTCAGCGTACCGCTGTTGAACTTGGCATTGGCCGGATCGGCGATGGCCTGCAGGGCAATCTTGCT
GCTGGTGGCAAGGCTGTTGACCTGGATCTGGTAGGTGCCAGCCACCGCGCTCTGGGTGGCGCTCGCCTTGAG
AATGTCTTCGTTGGAAGACTTGGCGGTGCGCGCCATGAACACAGCATTGCTGTTCAGCGCCGTGAGCGCCGT
CTGGAACGCGCTGATCGCACTCTTGAACTGGCCCAGGGCAGTGAGACGAGTAGTGGTGGTCTTCTCCAGGGT
GGCGAGCTGGTTGGTCTTAGCCGCGCCCTCCAGGTTCACCATCTTGTTCACCAGATCGGTGTAATCGGTCGA
GCCTACTCCTATCGAGATACCGGCCATAATCCATCTCCGTCAAAAAACCGTGCATGTACTGCCCTATCCCTT
CGACAGGGCAAGCACCATGCCAAGTCGTTCAACCCGCGCGTCAGGCGCGGGTTTCGAACAGGACACTGCGTA
CGTCGTCGAGCCGGGCGGCAAGTTTTAGTACTTCTTCGGAAGGGATTTGCCGCACGACTTCGCCCGAGTCAC
CGTCGATCACCTTGA