ViewGene

Locus Name:
GeneID:
Location:

GeneID:5599
TrivialName: PA14_50350
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_50350
PAO1 Ortholog Locus:
Sequence Length:2070
Protein Length:689
Start: 4475687
Stop: 4477756
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 170/707 (24%), Positives = 255/707 (36%), Gaps = 127/707 (17%)
Sequence:
ATGACGACGGTCTCTCGGTTAAGGCGCTCAGCGGAACGCGCCTATCAGGGTATCGAACAGCGAGCGGGCAAC
TTGAATGACCTGGGCCGACGCGCTGTAGTACTGCTGGAACTGGATCAGGTTGGCCGCCTCTTCGTCGAGGCT
CACCCCGGACAGCGAGTCGCGGCTGTCCTGCGCCTGCTTGAGCACGGTCTGCGAGGCGTCGGCGCTGGCGCG
CGCCTGGGCGGTCAGGGTGCCGACCCGCTCCACCAGTCCACCGTAGGCGTCGTTGTAGGTAGACCCCGTGCT
GCCGGTACCGCCCACCGTCGGCTTGGTCTGCAAGGCATTCAGGTTGAGGGCGTTGCGGTTGTCCGAAATGCC
GTCCTTGTTGAAGCTCAGGGTGAAACTGTCGCCAGTCTGCGGCACGTTGGACAGGTTGAACTCGTAGGTATA
GGTCTGGCCGCTGCCCGGATCGGTATAGGCCATGCGCACGCTGTTGCTGGTACCGCTGTTCAGCGTCGGACT
GCCGGGCAGCGCGTTGCCGTCCTTGTCGACATAACTCCAACCGGCCGGCAGCGGCGAGGTCATGGTGTAGGT
CTTGCCATCCGCGCTGACCGTCGCGCTCAGCGGCAGACCATTGGCGCCGAAGGCGTTCTGCAGAACCGCCGG
ATCGATCGGCGACGGTCCGCCGACCAGGTTCGGCTGGCCGATGGCGCCGCTGCCGCGGTTGTTGGTGGTTGC
CTCGGCGCGAGCGGACCCGGCGAAAGCCAGTTGCGAAGCGTTCTTCAGGGTTGTCTCGATATCGCTGGCGCC
GCGCCGGGTCGGCTGCAGGGTGAAGCGGTCGCCCGCGGCCGGCAGTTGGTCGAGGGTCACGCTGAAGCCCTG
GTCGACGCCGTTGGCATCCTTGAACGAGAGGGTGTAGGGACCGGTACCGCTGACCGTGACCTGCATGCTTGC
GTCGTCGCCCAGGCGCCGCGCGGTGAAATTGGTGCCGTCGAAGTCCAGGCGGAAATCGCTGGAATTCAGCTT
GCTGGTATCGGTGATGTTCAGGTTGGCGTGGACATTGCCGGTGTTGCCGTTCTTCGCCAGGACCCGCAGCGC
CGTGATGTCCGGATCGTTGATGTCGCCGAACAGGTTGGCGCCGGCCTTGCCCGCCAGGTCCAGGCCCTGCCC
CAGTTGCTTGTTGACGGTATCGGCGAAGGTCAGCGCAAGTTGGCCGAGCTTGTTGTAGGAGCTATCCAGGAC
GGTATCGCGATACGCCAGCAGGCCGCCCATCTGCCCGCCGGAGACCAACCGGGTCACGTTTTGCGTGGAGTC
GCCAAGCGTGAGCTGCACCTGGTAGCGGGTCGGGTCGTCCAGCCCCGGCACCACGCTCAGCGTCGAAACGGT
ATTGCCCACCACCAGCGGCTGGCCGCTGCCGATGAACAGGCTGACGCTGTTGTCGTCCTGGGTGACCGCGGT
CACGCCGACCATCTCGGAGAGCTTGCGCACCGCTTCGTCGCGCGCGTCCAGCAGATCGTTGGGCACGGCCCC
GGCGGATTTCGCCTTGGCGATGGCATCGTTGTACTCGGCCACGCTCTGGCTGAGATTGTTCACCTGCGAGGT
CAGGGCACCCAACTGCTGGTTGATCAGGCTGTTCTGCTTGTCCAGTTGGTCGTAGAGGGTATTGAAGGTCTT
GCTCAGGCCCTGCGCCTGGGCCAGCACCGCCTCGCGCGCCTCGGTCGAGGACGGGTTCTGCGCAGCGGTCTG
CAAGGCGGAAAAGAAACGCTGCATCGCCGGGCTGACCCCGGTGGTGTTATCCGCCAGCAGCGAGTTGAGCTG
GTCGATCTGGCCCAGGAAAGCGCTCAACTCGCTGTTCTGGCTGGTGGCGTTGCGCAACTGGCCGGTGAGGAA
GTCACTGGCCAGGCGGCGCACGTCGACGATCTGGCTGCCCGAGCCCATGTAGCCGGCACCGCTGAACTGCGG
GACCTGGGTCTGCTGGATGGCATCCTGGCGGCTGTAGCCCGGCGTCTTGACGTTGGTGATGTTGTGCCCGGT
GATGGTCAGCCAGGTCTGGCTGGTGCCGAGGCCGGACAGGCCTATCGAGAGTAG
Translation:
MTTVSRLRRSAERAYQGIEQRAGNLNDLGRRAVVLLELDQVGRLFVEAHPGQRVAAVLRLLEHGLRGVGAGA
RLGGQGADPLHQSTVGVVVGRPRAAGTAHRRLGLQGIQVEGVAVVRNAVLVEAQGETVASLRHVGQVELVGI
GLAAARIGIGHAHAVAGTAVQRRTAGQRVAVLVDITPTGRQRRGHGVGLAIRADRRAQRQTIGAEGVLQNRR
IDRRRSADQVRLADGAAAAVVGGCLGASGPGESQLRSVLQGCLDIAGAAPGRLQGEAVARGRQLVEGHAEAL
VDAVGILEREGVGTGTADRDLHACVVAQAPRGEIGAVEVQAEIAGIQLAGIGDVQVGVDIAGVAVLRQDPQR
RDVRIVDVAEQVGAGLARQVQALPQLLVDGIGEGQRKLAELVVGAIQDGIAIRQQAAHLPAGDQPGHVLRGV
AKRELHLVAGRVVQPRHHAQRRNGIAHHQRLAAADEQADAVVVLGDRGHADHLGELAHRFVARVQQIVGHGP
GGFRLGDGIVVLGHALAEIVHLRGQGTQLLVDQAVLLVQLVVEGIEGLAQALRLGQHRLARLGRGRVLRSGL
QGGKETLHRRADPGGVIRQQRVELVDLAQESAQLAVLAGGVAQLAGEEVTGQAAHVDDLAARAHVAGTAELR
DLGLLDGILAAVARRLDVGDVVPGDGQPGLAGAEAGQAYRE*
AnnotationID:5601GeneID:5599
AnnotatorUID: danlee
Modification Date/Time: 2004-05-20 16:04:46
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:11167
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28335
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48601How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 478221Stop: 476152
Length: 2070
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGACGACGGTCTCTCGGTTAAGGCGCTCAGCGGAACGCGCCTATCAGGGTATCGAACAGCGAGCGGGCAAC
TTGAATGACCTGGGCCGACGCGCTGTAGTACTGCTGGAACTGGATCAGGTTGGCCGCCTCTTCGTCGAGGCT
CACCCCGGACAGCGAGTCGCGGCTGTCCTGCGCCTGCTTGAGCACGGTCTGCGAGGCGTCGGCGCTGGCGCG
CGCCTGGGCGGTCAGGGTGCCGACCCGCTCCACCAGTCCACCGTAGGCGTCGTTGTAGGTAGACCCCGTGCT
GCCGGTACCGCCCACCGTCGGCTTGGTCTGCAAGGCATTCAGGTTGAGGGCGTTGCGGTTGTCCGAAATGCC
GTCCTTGTTGAAGCTCAGGGTGAAACTGTCGCCAGTCTGCGGCACGTTGGACAGGTTGAACTCGTAGGTATA
GGTCTGGCCGCTGCCCGGATCGGTATAGGCCATGCGCACGCTGTTGCTGGTACCGCTGTTCAGCGTCGGACT
GCCGGGCAGCGCGTTGCCGTCCTTGTCGACATAACTCCAACCGGCCGGCAGCGGCGAGGTCATGGTGTAGGT
CTTGCCATCCGCGCTGACCGTCGCGCTCAGCGGCAGACCATTGGCGCCGAAGGCGTTCTGCAGAACCGCCGG
ATCGATCGGCGACGGTCCGCCGACCAGGTTCGGCTGGCCGATGGCGCCGCTGCCGCGGTTGTTGGTGGTTGC
CTCGGCGCGAGCGGACCCGGCGAAAGCCAGTTGCGAAGCGTTCTTCAGGGTTGTCTCGATATCGCTGGCGCC
GCGCCGGGTCGGCTGCAGGGTGAAGCGGTCGCCCGCGGCCGGCAGTTGGTCGAGGGTCACGCTGAAGCCCTG
GTCGACGCCGTTGGCATCCTTGAACGAGAGGGTGTAGGGACCGGTACCGCTGACCGTGACCTGCATGCTTGC
GTCGTCGCCCAGGCGCCGCGCGGTGAAATTGGTGCCGTCGAAGTCCAGGCGGAAATCGCTGGAATTCAGCTT
GCTGGTATCGGTGATGTTCAGGTTGGCGTGGACATTGCCGGTGTTGCCGTTCTTCGCCAGGACCCGCAGCGC
CGTGATGTCCGGATCGTTGATGTCGCCGAACAGGTTGGCGCCGGCCTTGCCCGCCAGGTCCAGGCCCTGCCC
CAGTTGCTTGTTGACGGTATCGGCGAAGGTCAGCGCAAGTTGGCCGAGCTTGTTGTAGGAGCTATCCAGGAC
GGTATCGCGATACGCCAGCAGGCCGCCCATCTGCCCGCCGGAGACCAACCGGGTCACGTTTTGCGTGGAGTC
GCCAAGCGTGAGCTGCACCTGGTAGCGGGTCGGGTCGTCCAGCCCCGGCACCACGCTCAGCGTCGAAACGGT
ATTGCCCACCACCAGCGGCTGGCCGCTGCCGATGAACAGGCTGACGCTGTTGTCGTCCTGGGTGACCGCGGT
CACGCCGACCATCTCGGAGAGCTTGCGCACCGCTTCGTCGCGCGCGTCCAGCAGATCGTTGGGCACGGCCCC
GGCGGATTTCGCCTTGGCGATGGCATCGTTGTACTCGGCCACGCTCTGGCTGAGATTGTTCACCTGCGAGGT
CAGGGCACCCAACTGCTGGTTGATCAGGCTGTTCTGCTTGTCCAGTTGGTCGTAGAGGGTATTGAAGGTCTT
GCTCAGGCCCTGCGCCTGGGCCAGCACCGCCTCGCGCGCCTCGGTCGAGGACGGGTTCTGCGCAGCGGTCTG
CAAGGCGGAAAAGAAACGCTGCATCGCCGGGCTGACCCCGGTGGTGTTATCCGCCAGCAGCGAGTTGAGCTG
GTCGATCTGGCCCAGGAAAGCGCTCAACTCGCTGTTCTGGCTGGTGGCGTTGCGCAACTGGCCGGTGAGGAA
GTCACTGGCCAGGCGGCGCACGTCGACGATCTGGCTGCCCGAGCCCATGTAGCCGGCACCGCTGAACTGCGG
GACCTGGGTCTGCTGGATGGCATCCTGGCGGCTGTAGCCCGGCGTCTTGACGTTGGTGATGTTGTGCCCGGT
GATGGTCAGCCAGGTCTGGCTGGTGCCGAGGCCGGACAGGCCTATCGAGAGTAG