ViewGene

Locus Name:
GeneID:
Location:

GeneID:5595
TrivialName: PA14_50490
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_50490
PAO1 Ortholog Locus:
Sequence Length:1611
Protein Length:536
Start: 4485314
Stop: 4486924
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCATGGCGTTCTCGGCGTAGTTGGCCTGCTCGATCTGGGCGTCGACAGTGTTCTGGTCGATCGACGGCTG
GACCGGGATGCGGTACTGCAGGCTGCCCTCGCCCATGCCGAAACCTTCGGCGGCGATATGCCGCTCGTTGGT
GGTGCGGGTGGCGAAGGTACCCTTGGCGGCCTTGTCCTTCTGCTCGGCGAGAACCGCGGCGAAGTCCAGGTC
GCGAGCCTTGTAGTTCGGGGTATCGGCGTTGGCCAGGTTGTTGGCCAGCACTTCGGCGCGCTGGGCGCGGAA
GCTGAGGGCCTGCTGGTGGATACCGAGTGCTCTGTCGAAACTGATGCTCATGGCTGCGAACCTGTTTGCCGG
TGTGGCTTTCGTCGCCAACACTTCAGCAAGGCCCGTGCCAAATTATTAAAAACCTTTATATTCAATAAGTTG
AGTTTATTTAAGGGCAACCCGGAAGCGGCAAGCGGCAAGCCGTTTCCGCTTGCCGGCAAGGGTGGCAAGCCC
CTGGAACGGCTTCTCCGGCAAACGAAAAAAGGCCCGATATCGTCGATATCGGGCCTTTCCCATGCTTCCGGC
CGCCGGGGACACGGCTCACTCGTGGCGAATGATCCGCTCGAGATCCACCGGTTCGCCGGGATGGGCATGCAG
CTTGGCGCGAATGTCCTCGAACATCGCATCGTATTCCTTGTGCACCCGGGTGATCGCGCCGAACTTCGGGTG
CAGGCCGTGCTTCTGGGCGACCCGCGTGGCATCGCTGGCGAAGTTGAAGGCGGTATCGCGCGGCAGCTCGAA
GGAGTCGCTGAACGGCTTGCCGTCGATCTCGCCGTCCATGTCGAAGTGCACATAGGCGCCGGATTCGGCGTT
CTGCCGCACCTCGTAGCGGATATGGATGTTGATGTCCTGCTGGTCGAGGCCGGGCAGGCTGACCAGATGGAG
GTGGCCTGGTTCGAACATGACGAATCTCCTGGTGGGAATCGGAATCAGTCTAGCCAGGGTCGAGCGAAAGAA
AACCGCCCTGGATCAGTGCAACGTCGCTTTTTCCGCGCGTTCCTGAATGACCACCCAGGGCGCCACCACCAC
CGCCCAGAGGGTCGGGTCGCGTTCGAGGAAGTCCTTGGCCGCGTCCTCCCCGACCTTGCTCAGGCCGCCGCC
GGAAAGCCAGGCGGCGACCTTCTCGCGGTCGTCCCCGGCCAGGGCCTCGGCGACTTCCACCAGGTCCAGCGC
GGCATCGACCTGGAGCAAGGCGCCACGGGCGAAGAACGGTTGCAGCTCGGCCCAGGAAATGACCGCGGTCTC
GCCGAGCAGCTTGGCATAGAGGGTGCTAGTTTGTTCTGTCATGGGATCTACCTGGATTGCATGGGCGCCATG
ATAACGCCCGCCGGTAGCCCACGACAGCCGAAGGGAAACCGGGCCCAGGGAGGTGATGCAGGTCCGCGCCGT
TTTTCTATACGTTTATGTCAACCAGGCGACACGACTCACGGGAGCTCGCCGTGCCGTGCTTTTCAAGCGACG
AAGCGCCGCTCTACACTGTACCGGTACAGTTCCCGGGGTCCGTCCATGACGATCACCCGGTCTCCTCCGGCC
CCCGCGGCCGCGAGACTACAACAATGA
Translation:
MHGVLGVVGLLDLGVDSVLVDRRLDRDAVLQAALAHAETFGGDMPLVGGAGGEGTLGGLVLLLGENRGEVQV
ASLVVRGIGVGQVVGQHFGALGAEAEGLLVDTECSVETDAHGCEPVCRCGFRRQHFSKARAKLLKTFIFNKL
SLFKGNPEAASGKPFPLAGKGGKPLERLLRQTKKGPISSISGLSHASGRRGHGSLVANDPLEIHRFAGMGMQ
LGANVLEHRIVFLVHPGDRAELRVQAVLLGDPRGIAGEVEGGIARQLEGVAERLAVDLAVHVEVHIGAGFGV
LPHLVADMDVDVLLVEAGQADQMEVAWFEHDESPGGNRNQSSQGRAKENRPGSVQRRFFRAFLNDHPGRHHH
RPEGRVAFEEVLGRVLPDLAQAAAGKPGGDLLAVVPGQGLGDFHQVQRGIDLEQGATGEERLQLGPGNDRGL
AEQLGIEGASLFCHGIYLDCMGAMITPAGSPRQPKGNRAQGGDAGPRRFSIRLCQPGDTTHGSSPCRAFQAT
KRRSTLYRYSSRGPSMTITRSPPAPAAARLQQ*
AnnotationID:5597GeneID:5595
AnnotatorUID: danlee
Modification Date/Time: 2004-05-19 17:05:55
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15455
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28327
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48597How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 468594Stop: 466984
Length: 1611
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCATGGCGTTCTCGGCGTAGTTGGCCTGCTCGATCTGGGCGTCGACAGTGTTCTGGTCGATCGACGGCTG
GACCGGGATGCGGTACTGCAGGCTGCCCTCGCCCATGCCGAAACCTTCGGCGGCGATATGCCGCTCGTTGGT
GGTGCGGGTGGCGAAGGTACCCTTGGCGGCCTTGTCCTTCTGCTCGGCGAGAACCGCGGCGAAGTCCAGGTC
GCGAGCCTTGTAGTTCGGGGTATCGGCGTTGGCCAGGTTGTTGGCCAGCACTTCGGCGCGCTGGGCGCGGAA
GCTGAGGGCCTGCTGGTGGATACCGAGTGCTCTGTCGAAACTGATGCTCATGGCTGCGAACCTGTTTGCCGG
TGTGGCTTTCGTCGCCAACACTTCAGCAAGGCCCGTGCCAAATTATTAAAAACCTTTATATTCAATAAGTTG
AGTTTATTTAAGGGCAACCCGGAAGCGGCAAGCGGCAAGCCGTTTCCGCTTGCCGGCAAGGGTGGCAAGCCC
CTGGAACGGCTTCTCCGGCAAACGAAAAAAGGCCCGATATCGTCGATATCGGGCCTTTCCCATGCTTCCGGC
CGCCGGGGACACGGCTCACTCGTGGCGAATGATCCGCTCGAGATCCACCGGTTCGCCGGGATGGGCATGCAG
CTTGGCGCGAATGTCCTCGAACATCGCATCGTATTCCTTGTGCACCCGGGTGATCGCGCCGAACTTCGGGTG
CAGGCCGTGCTTCTGGGCGACCCGCGTGGCATCGCTGGCGAAGTTGAAGGCGGTATCGCGCGGCAGCTCGAA
GGAGTCGCTGAACGGCTTGCCGTCGATCTCGCCGTCCATGTCGAAGTGCACATAGGCGCCGGATTCGGCGTT
CTGCCGCACCTCGTAGCGGATATGGATGTTGATGTCCTGCTGGTCGAGGCCGGGCAGGCTGACCAGATGGAG
GTGGCCTGGTTCGAACATGACGAATCTCCTGGTGGGAATCGGAATCAGTCTAGCCAGGGTCGAGCGAAAGAA
AACCGCCCTGGATCAGTGCAACGTCGCTTTTTCCGCGCGTTCCTGAATGACCACCCAGGGCGCCACCACCAC
CGCCCAGAGGGTCGGGTCGCGTTCGAGGAAGTCCTTGGCCGCGTCCTCCCCGACCTTGCTCAGGCCGCCGCC
GGAAAGCCAGGCGGCGACCTTCTCGCGGTCGTCCCCGGCCAGGGCCTCGGCGACTTCCACCAGGTCCAGCGC
GGCATCGACCTGGAGCAAGGCGCCACGGGCGAAGAACGGTTGCAGCTCGGCCCAGGAAATGACCGCGGTCTC
GCCGAGCAGCTTGGCATAGAGGGTGCTAGTTTGTTCTGTCATGGGATCTACCTGGATTGCATGGGCGCCATG
ATAACGCCCGCCGGTAGCCCACGACAGCCGAAGGGAAACCGGGCCCAGGGAGGTGATGCAGGTCCGCGCCGT
TTTTCTATACGTTTATGTCAACCAGGCGACACGACTCACGGGAGCTCGCCGTGCCGTGCTTTTCAAGCGACG
AAGCGCCGCTCTACACTGTACCGGTACAGTTCCCGGGGTCCGTCCATGACGATCACCCGGTCTCCTCCGGCC
CCCGCGGCCGCGAGACTACAACAATGA