ViewGene
Locus Name:
GeneID:
Location:

GeneID:5591
TrivialName: PA14_50960
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_50960
PAO1 Ortholog Locus:
Sequence Length:687
Protein Length:228
Start: 4527546
Stop: 4526860
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCGTCGCCGGACGCTGGCGAATGCTCTCGAACCAGCGCTGCAGGTGTGGGAAGTCGGCGAGATCCTGCTC
CTGCCACTGATGTGGGACGATCCACGGATAGATGGCCATGTCGGCGATGCTGTAGTCGTCGCCAGCGACGAA
GGCGCGGTCCGCCAGGCGCTGGTCGAGAACGCCGTACAGGCGCGCGGTTTCCTTGACGTAACGGTCGATGGC
GTAGGGAATCTTCTCCGGGGCGAAGCGGTTGAAATGGTGGTTCTGCCCGGCCATCGGCCCCAGCCCGCCCAT
CTGCCAGAACAGCCACTGCAGGGTTTCCTGGCGCGCGCGCAGGTCCTTGGCGAGGAACCGTCCGGTCTTTTC
CGCGAGATAGAGCAGGATGGCGCCGGACTCGAACAGCGACAGGGGAGCGCCGCCGTCGGCTGGTTGGCGATC
GACGATGGCGGGAATCTTGTTGTTCGGCGACACCTTCAGGAAATCCGCCTGGAACTGGTCGCCCTGGCTGAT
ATTGATCGGATGGATGGCGTAGGGCAGGCCGGTTTCTTCCAGGAAAAGAGTAATCTTGTGGCCGTTCGGGGT
GGTCCAGTAGTACAGGTCGATCATCGGTGCGTCTCCGGCTCGTCGATGGGCTACGAACGGAAGACTCTACGC
CAGGAACCTAGGTTCGATGCAAACCGCTGTCGCGCATGA
Translation:
MRRRTLANALEPALQVWEVGEILLLPLMWDDPRIDGHVGDAVVVASDEGAVRQALVENAVQARGFLDVTVDG
VGNLLRGEAVEMVVLPGHRPQPAHLPEQPLQGFLARAQVLGEEPSGLFREIEQDGAGLEQRQGSAAVGWLAI
DDGGNLVVRRHLQEIRLELVALADIDRMDGVGQAGFFQEKSNLVAVRGGPVVQVDHRCVSGSSMGYERKTLR
QEPRFDANRCRA*
AnnotationID:5593GeneID:5591
AnnotatorUID: danlee
Modification Date/Time: 2004-05-18 18:06:47
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:15454




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:28319




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48593How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 426362Stop: 427048

          
Length: 687


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCGTCGCCGGACGCTGGCGAATGCTCTCGAACCAGCGCTGCAGGTGTGGGAAGTCGGCGAGATCCTGCTC 
CTGCCACTGATGTGGGACGATCCACGGATAGATGGCCATGTCGGCGATGCTGTAGTCGTCGCCAGCGACGAA 
GGCGCGGTCCGCCAGGCGCTGGTCGAGAACGCCGTACAGGCGCGCGGTTTCCTTGACGTAACGGTCGATGGC 
GTAGGGAATCTTCTCCGGGGCGAAGCGGTTGAAATGGTGGTTCTGCCCGGCCATCGGCCCCAGCCCGCCCAT 
CTGCCAGAACAGCCACTGCAGGGTTTCCTGGCGCGCGCGCAGGTCCTTGGCGAGGAACCGTCCGGTCTTTTC 
CGCGAGATAGAGCAGGATGGCGCCGGACTCGAACAGCGACAGGGGAGCGCCGCCGTCGGCTGGTTGGCGATC 
GACGATGGCGGGAATCTTGTTGTTCGGCGACACCTTCAGGAAATCCGCCTGGAACTGGTCGCCCTGGCTGAT 
ATTGATCGGATGGATGGCGTAGGGCAGGCCGGTTTCTTCCAGGAAAAGAGTAATCTTGTGGCCGTTCGGGGT 
GGTCCAGTAGTACAGGTCGATCATCGGTGCGTCTCCGGCTCGTCGATGGGCTACGAACGGAAGACTCTACGC 
CAGGAACCTAGGTTCGATGCAAACCGCTGTCGCGCATGA