ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5586

TrivialName: PA14_51180

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_51180

PAO1 Ortholog Locus:

Sequence Length: 1449

Protein Length: 482

Start: 4548973

Stop: 4550421

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAC45277.1| (U46844) orf3 [Mycobacterium smegmatis] Identities = 66/259 (25%), Positives = 88/259 (33%), Gaps = 53/259 (20%)

Sequence:

ATGAGCTGTTGCGAGTGGTTCGCTGACATGGGTTCACCTGATCCGTTTGTCTGTGGCCGGCACGACAACCTT
CTCGCGGGCGAGCGCGCCCGCGGGACGCCGCCACGGCAGCGCCCGGAAGGCCTGTCGGCCAGGGGTCTAGAG
CGTGTCGCCGGTGCCGAGCAACGCGGTTACCTGGCTGGACAGCGTGCCGCCGTTGCCGTGCAGCAACGCCAC
GTCGGCCTTGGCCAACTGCCGCTCGCCGGCCTGGCGGCGGAGCTGGGTCACCGCCTCGATGATCAGGAACAT
CCCGTACATCCCCGGATGCACGCAGGACAGCCCGCCACCGTTGGTGTTCACCGCCAGCTCGCCGCCGGGCGC
GATGCGTCCGCCCTGGACGAATGGGCCGCCCTCGCCCTTGGCGCAGAAACCCAGGTCCTCGAGGAACAGCAG
GGTGTTGATGGTAAAGGCGTCGTAGAGCATCACCAGGTCGATGTCGGCGTGCCGCACACCGGCCATCTGCAT
GGCTCGCGGAGCGCTTTCCGAGGCCGCCGTCACGGTGAGGTCGGGCATCGACACGATCGAGCGATGCCACTG
CGCTCCGGCCGCGCCAAGGAAGTACACCGGCGCATTGGGCAAGTCGCGGGCGCGCTCGGCGCGCACCACCAC
GCAGGCGCCACCGCCGTCGGTGACCAGGCAGCAGTCGGCGGCACTCAGCGGGTCGCTGACCATCCGCGCGGC
AAGGACGTCATCGACGCTCAACGGCCCGCGGGCGAACGCCTCGGGATTCAGGTTGGCCCATTGCCGGGCAGA
GACCGCCACCTCGGCGAGCTGCTCGCGTGTGGTGCCGTACTGGTGCATGTGCCGGCTGGCCGCCAGGGCATA
GGCGGTGATCGGGTGGCGCGGCTTGTAGGGCGTCTCGTGCCATTGTGGCTCGCTCATCGATACCAGGCGGCC
GCCGGCGGTTCGCTGGTTGGAGCCGTAGCAGATCAGCGCAGCGTCGCAGAGACCGGCCTCCAGTGCCAAAGT
GGCCTGCAGCAGGTGCAGCTCGAAACTGGAGCCGCCGATATTGGTGCCATCCACGAATTTCGGGCGGATGCC
GAGGTATTCGGCGACCGACAAGGTGGGAAAGGCATGGGAGCTGGTGGCGGCGAAGATCGCGTCGATGTCGGA
AAGCTTCAGGCCGGCATCGGCAATGGCCTTGAGCGACGCCTGGCCGAGCAGTTCGATGGCGCTGTAGCCCGG
CGCCTCGCCGACGCCTGCGCTACCGATGCCGACGATGGCGGTCTTGCCACGGATGGCCGCGCTCATGGTCGT
CCCTCCTGGTGGGGAACGAACACCACGACATTGGCACCGTCCTGCTCGACGATGCGCGCCTGCACACGGGTG
CCGATCGGCAGGCTCTCGTGCCCGTCGATCCGCGACATCATGCGCACGCCCTCGTCCAGGTCGACCAGCGCG
ACATTGTGA

Translation:

MSCCEWFADMGSPDPFVCGRHDNLLAGERARGTPPRQRPEGLSARGLERVAGAEQRGYLAGQRAAVAVQQRH
VGLGQLPLAGLAAELGHRLDDQEHPVHPRMHAGQPATVGVHRQLAAGRDASALDEWAALALGAETQVLEEQQ
GVDGKGVVEHHQVDVGVPHTGHLHGSRSAFRGRRHGEVGHRHDRAMPLRSGRAKEVHRRIGQVAGALGAHHH
AGATAVGDQAAVGGTQRVADHPRGKDVIDAQRPAGERLGIQVGPLPGRDRHLGELLACGAVLVHVPAGRQGI
GGDRVARLVGRLVPLWLAHRYQAAAGGSLVGAVADQRSVAETGLQCQSGLQQVQLETGAADIGAIHEFRADA
EVFGDRQGGKGMGAGGGEDRVDVGKLQAGIGNGLERRLAEQFDGAVARRLADACATDADDGGLATDGRAHGR
PSWWGTNTTTLAPSCSTMRACTRVPIGRLSCPSIRDIMRTPSSRSTSATL*

AnnotationID:5588 GeneID:5586

AnnotatorUID: danlee

Modification Date/Time: 2004-05-18 16:04:17

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:11147

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28309