ViewGene

Locus Name:
GeneID:
Location:

GeneID:5583
TrivialName: PA14_51400
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_51400
PAO1 Ortholog Locus:
Sequence Length:1914
Protein Length:637
Start: 4567228
Stop: 4569141
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGTCGATGTCGTCCAAGGTCAGCTCATGGGCCACGAGCATTTCGCCGGCGATCCGTACCAGGGTCTGGCT
GGCATGCTCGAACATCGGCCGGCCGCGCATGAGGAACTCGCCCCCGCCCTCGCGCAGGACGTTCTCATCGAG
GAAGGTCGGCGAGGCACTACCCGGCGCCGCGGTCATCAGCAGGTCGAAGTAGTTGCCGTCGGCGCCCAGGCG
CAGGTCCAGCAGTCCGTCTTCGAGACTCTCGCCGGCGCTGACCACCACCGCGCCGGCACCGTCGCCGAGCAG
GATCGACAGGTTGCGGCCGCGGTCCGAACAGTCCATGCGCTTGGACAGCACCTCGCCGCAGACCACCAGGAC
ATGCCGTGCCAGCCCGGCGAGGATCTGCCCGCGAGCCATCTGCAAGCCGTACAGCAACCCGCTGCACTGTGC
CCGGATATCCAGCACCGGGATGTGCCGCAGGCCCAGCAGCGGCTGGATCAGGCAGGCCTGGGACGGGTCGTG
GTGGTCCGGCGACAGGGTGTTCACCAGCAACAGGTCGATGTCCTCCGGCAGCAGCCCGGCAGCCTCGATGGC
CTGGCGCGCCGCCGGTACCATCAGCGCGCTGACCGCCTGTTCCGGCTCGACGTGATAGCGGGTGCGTACGCC
GGTGCGTTCAACGATGAACTCATCCGACGTGTTGATGCGCCCTACCAGGTCATGATTGCTGACCTGGCGTTT
CGGCAGGCTGAAACCCAGCCCGGCCAGGATCGGATTACCCATGTACAGCCCTCCTCGGACACCGTGGTTCAA
CATGGCGATGCCTCAGCACACCAGCACCTCGCCCAATTGCCAGACCTGGGCGGCGAAACCCCAGCCGGTGGC
TGCGCCGGCCATGACGATACGATCGCCGGGGCGGATCTTGCCCTCGCGCAGGCCGGTCATCAGGGTGTACGG
GATGGAAACGGAGATCATCACGCCGGTATCGCCCATCGTCAGCTGGTACTGCTCCGGACGGGCACCGATGCC
CTCGGCCCAGGCCTTGACCAGGAACGGCGCTGGCTGGTGGAAGACGAAATAATCGATGTCATCGCTGCCCAG
GCCGGCCTTTTCCAACGCCCGGCGCATCGCGATCGGCACGTTGGTCGGGACGAAGCTGGCCATCTTGTTCTG
GCCGTCGCTGAACAACGAGAAATACAGCCGCGGCTTGGCCTCGCCGGTCGGGTTTTCCGGCAGGCGCCAGCG
ACCGGTGGCCACTTCATAGAACGTGGCGTCGCTGTGTTCGGCCGAAGCCAGCAGATCGCAGCTGTCGTCGTC
GCCGCGGGTCAGCAGGGCCACCGCGCAGCCATCGGCGAACAGGGTCGAGGTACGCGAGGTGAAGTCGAGCAG
GTTGGAGATGTACTCGCTGCACACCACCAGCACTTTCTCGGCCTTGCCCTGGCGGATCATGCTCGCTGCCAG
GCGCAGGTTGAGCAGGAAGCTGGCGCACTCCATCTGCGAATCCAATGGCAGCGCCCGGCTCAGGCCGAGCTG
CTTGGACAGCACGTTGGCCATGCGCGGATAGAGACGCCCGCGCAGGTCCGGCAGGACATCGCCGGCGTCGGT
CATGATCGGCGAGGAAGCCGAACAGATCAGCATGTCCACGCTATCCGGCGCAGTATCGCTGCTGCGCAGCAG
GCGCTCGGCGGCCCGGACCACCAGGCTGAACTCGTTCTCGCCGTTCCGCGGGTCGAAATAGCCCCGCCGATT
GACGCCCCAGAATTGCCACCAAGACTCGCTGAGGTCCGGTACCGCAGCGAACACCGGATCGTCGTTTTCGTA
GCTGCGAGCCGGAAGTTCACAGGTGATCGCTGCCAGTTTGACCTTATGCATGAGCTTCTCCCGCCAGTTCCA
GGGTCACGCCCTCCACCACCATGCCGAACGGATCGAAGCTGA
Translation:
MVDVVQGQLMGHEHFAGDPYQGLAGMLEHRPAAHEELAPALAQDVLIEEGRRGTTRRRGHQQVEVVAVGAQA
QVQQSVFETLAGADHHRAGTVAEQDRQVAAAVRTVHALGQHLAADHQDMPCQPGEDLPASHLQAVQQPAALC
PDIQHRDVPQAQQRLDQAGLGRVVVVRRQGVHQQQVDVLRQQPGSLDGLARRRYHQRADRLFRLDVIAGAYA
GAFNDELIRRVDAPYQVMIADLAFRQAETQPGQDRITHVQPSSDTVVQHGDASAHQHLAQLPDLGGETPAGG
CAGHDDTIAGADLALAQAGHQGVRDGNGDHHAGIAHRQLVLLRTGTDALGPGLDQERRWLVEDEIIDVIAAQ
AGLFQRPAHRDRHVGRDEAGHLVLAVAEQREIQPRLGLAGRVFRQAPATGGHFIERGVAVFGRSQQIAAVVV
AAGQQGHRAAIGEQGRGTRGEVEQVGDVLAAHHQHFLGLALADHARCQAQVEQEAGALHLRIQWQRPAQAEL
LGQHVGHARIETPAQVRQDIAGVGHDRRGSRTDQHVHAIRRSIAAAQQALGGPDHQAELVLAVPRVEIAPPI
DAPELPPRLAEVRYRSEHRIVVFVAASRKFTGDRCQFDLMHELLPPVPGSRPPPPCRTDRS*
AnnotationID:5585GeneID:5583
AnnotatorUID: danlee
Modification Date/Time: 2004-05-14 17:05:27
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:11141
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28303
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48585How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 386679Stop: 384766
Length: 1914
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGTCGATGTCGTCCAAGGTCAGCTCATGGGCCACGAGCATTTCGCCGGCGATCCGTACCAGGGTCTGGCT
GGCATGCTCGAACATCGGCCGGCCGCGCATGAGGAACTCGCCCCCGCCCTCGCGCAGGACGTTCTCATCGAG
GAAGGTCGGCGAGGCACTACCCGGCGCCGCGGTCATCAGCAGGTCGAAGTAGTTGCCGTCGGCGCCCAGGCG
CAGGTCCAGCAGTCCGTCTTCGAGACTCTCGCCGGCGCTGACCACCACCGCGCCGGCACCGTCGCCGAGCAG
GATCGACAGGTTGCGGCCGCGGTCCGAACAGTCCATGCGCTTGGACAGCACCTCGCCGCAGACCACCAGGAC
ATGCCGTGCCAGCCCGGCGAGGATCTGCCCGCGAGCCATCTGCAAGCCGTACAGCAACCCGCTGCACTGTGC
CCGGATATCCAGCACCGGGATGTGCCGCAGGCCCAGCAGCGGCTGGATCAGGCAGGCCTGGGACGGGTCGTG
GTGGTCCGGCGACAGGGTGTTCACCAGCAACAGGTCGATGTCCTCCGGCAGCAGCCCGGCAGCCTCGATGGC
CTGGCGCGCCGCCGGTACCATCAGCGCGCTGACCGCCTGTTCCGGCTCGACGTGATAGCGGGTGCGTACGCC
GGTGCGTTCAACGATGAACTCATCCGACGTGTTGATGCGCCCTACCAGGTCATGATTGCTGACCTGGCGTTT
CGGCAGGCTGAAACCCAGCCCGGCCAGGATCGGATTACCCATGTACAGCCCTCCTCGGACACCGTGGTTCAA
CATGGCGATGCCTCAGCACACCAGCACCTCGCCCAATTGCCAGACCTGGGCGGCGAAACCCCAGCCGGTGGC
TGCGCCGGCCATGACGATACGATCGCCGGGGCGGATCTTGCCCTCGCGCAGGCCGGTCATCAGGGTGTACGG
GATGGAAACGGAGATCATCACGCCGGTATCGCCCATCGTCAGCTGGTACTGCTCCGGACGGGCACCGATGCC
CTCGGCCCAGGCCTTGACCAGGAACGGCGCTGGCTGGTGGAAGACGAAATAATCGATGTCATCGCTGCCCAG
GCCGGCCTTTTCCAACGCCCGGCGCATCGCGATCGGCACGTTGGTCGGGACGAAGCTGGCCATCTTGTTCTG
GCCGTCGCTGAACAACGAGAAATACAGCCGCGGCTTGGCCTCGCCGGTCGGGTTTTCCGGCAGGCGCCAGCG
ACCGGTGGCCACTTCATAGAACGTGGCGTCGCTGTGTTCGGCCGAAGCCAGCAGATCGCAGCTGTCGTCGTC
GCCGCGGGTCAGCAGGGCCACCGCGCAGCCATCGGCGAACAGGGTCGAGGTACGCGAGGTGAAGTCGAGCAG
GTTGGAGATGTACTCGCTGCACACCACCAGCACTTTCTCGGCCTTGCCCTGGCGGATCATGCTCGCTGCCAG
GCGCAGGTTGAGCAGGAAGCTGGCGCACTCCATCTGCGAATCCAATGGCAGCGCCCGGCTCAGGCCGAGCTG
CTTGGACAGCACGTTGGCCATGCGCGGATAGAGACGCCCGCGCAGGTCCGGCAGGACATCGCCGGCGTCGGT
CATGATCGGCGAGGAAGCCGAACAGATCAGCATGTCCACGCTATCCGGCGCAGTATCGCTGCTGCGCAGCAG
GCGCTCGGCGGCCCGGACCACCAGGCTGAACTCGTTCTCGCCGTTCCGCGGGTCGAAATAGCCCCGCCGATT
GACGCCCCAGAATTGCCACCAAGACTCGCTGAGGTCCGGTACCGCAGCGAACACCGGATCGTCGTTTTCGTA
GCTGCGAGCCGGAAGTTCACAGGTGATCGCTGCCAGTTTGACCTTATGCATGAGCTTCTCCCGCCAGTTCCA
GGGTCACGCCCTCCACCACCATGCCGAACGGATCGAAGCTGA