ViewGene

Locus Name:
GeneID:
Location:

GeneID:5579
TrivialName: PA14_51970
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_51970
PAO1 Ortholog Locus:
Sequence Length:1335
Protein Length:444
Start: 4614272
Stop: 4612938
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCCTGGCCATTGCCTCGATGATGGCCTCTTCGCCAAGACTGGGCTCATCCAGGCCGAGGGCCTTGTATTC
GTCCTCCCCGGTCCGCAGCAACTGGCGGGCGGGAATGCCGAGCTTGGCCAGGATCGCTTTCAGCTCGGCGGC
GCTCGGCGGGGTTTCCAGATAGCGCACCACTTGCGGTTGCAGGCCGCGGGCTTCGAGCAGTTCGAGCGCTGC
GCGGGATTTCGAGCAGCGCGGATTGTGCAACAGGATCAGTTCGCTCATGTCAGGGGTCGCATGGCCGGTGAA
GTGACGGCTATTCTAACCGCCTCGTCGACCAGGACTGAACCCGTCGGCGCGAAGTACCGCCCCGAGAGGCGA
AGAACCGGCGCGACTTCAAGGAGAGGGCATGCGCGAACATTTCAACGATGGGGTCGAGTTCGCTCGCTTCCT
CGCTCATCGCTTCGTCACCGACAAGGCTCCCAACAGCGCGGCGGCGCTGACCTACACCACGTTGTTCGCGGT
AGTGCCGATGATGACGGTGATGTTTTCCATGCTTTCGCTGATTCCGGCATTCCATGGCATGGGCGAGTCGAT
CCAGACTTTCATCTTTCGCAATTTCGTGCCTTCCGCTGGAGAAGCGGTGGAAACCTACCTGAAGAGTTTCAC
CACCCAGGCCCGGCACCTGACCTGGGTCGGGGTGGTCTTTCTGGCAGTCACCGCCTTCACCATGCTGGTGAC
CATCGAGAAAGCCTTCAACGAGATCTGGCGGGTTCGCCAGCCACGCCGGGGTGTCGGGCGGTTCCTCCTCTA
CTGGGCGATCCTCAGCCTGGGCCCATTGTTGCTGGGGGCCGGCTTCGCCGTGACCACCTACATCACTTCGCT
GTCGCTGCTCCATGGCCCGGACGCGTTGCCGGGCGCGGAGACGCTGCTAGGGCTGATGCCGCTGGCGTTCAG
CGTGGCGGCCTTCACCCTGCTCTATTCGGCGGTCCCGAACGCCCGGGTCCCGGTGCGCCATGCCCTGATGGG
CGGCGTGTTCACCGCGGTACTGTTCGAAGCCGCGAAAACCCTGTTCGGGCTGTACGTAAGCCTGTTTCCCGG
CTACCAACTGATCTACGGTGCCTTCGCCACCGTGCCTATCTTCCTGCTGTGGATCTATCTTTCCTGGATGAT
CGTTCTGTTCGGCGCGGTGCTGGTCTGCAATCTCTCTTCTTCCCGTCTCTGGCGGCGGCGCTCGCTGCCCAA
GCTGATCGTTCTGCTCGGCGTGCTGAGGGTGTTCCACCAGCGCCAGCAGCTTGGACAGTCGCTACGCCTGAC
CCACTTGCATCGTGCGGGTTGGCTGTTGCCCGAGGATGA
Translation:
MPGHCLDDGLFAKTGLIQAEGLVFVLPGPQQLAGGNAELGQDRFQLGGARRGFQIAHHLRLQAAGFEQFERC
AGFRAARIVQQDQFAHVRGRMAGEVTAILTASSTRTEPVGAKYRPERRRTGATSRRGHARTFQRWGRVRSLP
RSSLRHRQGSQQRGGADLHHVVRGSADDDGDVFHAFADSGIPWHGRVDPDFHLSQFRAFRWRSGGNLPEEFH
HPGPAPDLGRGGLSGSHRLHHAGDHRESLQRDLAGSPATPGCRAVPPLLGDPQPGPIVAGGRLRRDHLHHFA
VAAPWPGRVAGRGDAARADAAGVQRGGLHPALFGGPERPGPGAPCPDGRRVHRGTVRSRENPVRAVRKPVSR
LPTDLRCLRHRAYLPAVDLSFLDDRSVRRGAGLQSLFFPSLAAALAAQADRSARRAEGVPPAPAAWTVATPD
PLASCGLAVARG*
AnnotationID:5581GeneID:5579
AnnotatorUID: danlee
Modification Date/Time: 2004-05-11 14:02:14
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:11135
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28295
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48581How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 339635Stop: 340969
Length: 1335
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCTGGCCATTGCCTCGATGATGGCCTCTTCGCCAAGACTGGGCTCATCCAGGCCGAGGGCCTTGTATTC
GTCCTCCCCGGTCCGCAGCAACTGGCGGGCGGGAATGCCGAGCTTGGCCAGGATCGCTTTCAGCTCGGCGGC
GCTCGGCGGGGTTTCCAGATAGCGCACCACTTGCGGTTGCAGGCCGCGGGCTTCGAGCAGTTCGAGCGCTGC
GCGGGATTTCGAGCAGCGCGGATTGTGCAACAGGATCAGTTCGCTCATGTCAGGGGTCGCATGGCCGGTGAA
GTGACGGCTATTCTAACCGCCTCGTCGACCAGGACTGAACCCGTCGGCGCGAAGTACCGCCCCGAGAGGCGA
AGAACCGGCGCGACTTCAAGGAGAGGGCATGCGCGAACATTTCAACGATGGGGTCGAGTTCGCTCGCTTCCT
CGCTCATCGCTTCGTCACCGACAAGGCTCCCAACAGCGCGGCGGCGCTGACCTACACCACGTTGTTCGCGGT
AGTGCCGATGATGACGGTGATGTTTTCCATGCTTTCGCTGATTCCGGCATTCCATGGCATGGGCGAGTCGAT
CCAGACTTTCATCTTTCGCAATTTCGTGCCTTCCGCTGGAGAAGCGGTGGAAACCTACCTGAAGAGTTTCAC
CACCCAGGCCCGGCACCTGACCTGGGTCGGGGTGGTCTTTCTGGCAGTCACCGCCTTCACCATGCTGGTGAC
CATCGAGAAAGCCTTCAACGAGATCTGGCGGGTTCGCCAGCCACGCCGGGGTGTCGGGCGGTTCCTCCTCTA
CTGGGCGATCCTCAGCCTGGGCCCATTGTTGCTGGGGGCCGGCTTCGCCGTGACCACCTACATCACTTCGCT
GTCGCTGCTCCATGGCCCGGACGCGTTGCCGGGCGCGGAGACGCTGCTAGGGCTGATGCCGCTGGCGTTCAG
CGTGGCGGCCTTCACCCTGCTCTATTCGGCGGTCCCGAACGCCCGGGTCCCGGTGCGCCATGCCCTGATGGG
CGGCGTGTTCACCGCGGTACTGTTCGAAGCCGCGAAAACCCTGTTCGGGCTGTACGTAAGCCTGTTTCCCGG
CTACCAACTGATCTACGGTGCCTTCGCCACCGTGCCTATCTTCCTGCTGTGGATCTATCTTTCCTGGATGAT
CGTTCTGTTCGGCGCGGTGCTGGTCTGCAATCTCTCTTCTTCCCGTCTCTGGCGGCGGCGCTCGCTGCCCAA
GCTGATCGTTCTGCTCGGCGTGCTGAGGGTGTTCCACCAGCGCCAGCAGCTTGGACAGTCGCTACGCCTGAC
CCACTTGCATCGTGCGGGTTGGCTGTTGCCCGAGGATGA