ViewGene

Locus Name:
GeneID:
Location:

GeneID:5578
TrivialName: PA14_52030
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_52030
PAO1 Ortholog Locus:
Sequence Length:1440
Protein Length:479
Start: 4619022
Stop: 4617583
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCCAGGGCCTGGTCGAAGCTTTCGCGATCGGCATAGGCCTTGTGATCGAGCACCTCGGTCTGGATGCCGG
CCTGGCGCGCGCGTTCCAGGCCATAGGCGTCCGCGCGGTTGGAGATCACCGCGCGGATCCGGGCCGGCGTGG
CGCCCTCCCGGAGGCTGTCGATCAGCGCCTGCAGGTTGCTGCCGGAGCCGGAAATCAGCACCACGACATTGC
AGAGTTTCGGCATCAGTGGTTTTTCAGATTGTTCAGGACCACGCGCTCGGCGTCCGCGCCGCAGGTTTCGAT
GCGACCGATCTGCCAGGGTTGCTCGCCGGCGGCACGCAGGACTTCCAGGGCTTTCTCGGCGTCGCTCTGGGC
CACGCAGATGACCATGCCGACGCCGCAGTTGAGTACGCGATGCATCTCGGTCTCGTCGACGTTGCCCTGTTC
CTGCAGCCAGTCGAATACCGCCGGACGGTTCCAGCTGGCGACATCGATCACGGCCTGGGCGTTGTCCGGCAG
GACGCGCGGGATGTTGTCCAGCAGGCCGCCGCCGGTAATGTGAGCCATGGCCTTGACCGCGCCGGTCTGCTT
GATCAGTTGCAGCAGCGGCTTGACGTAGATGCGGGTCGGCGCCATCAGCAGGTCGGCCAGCGGCTTGCCGTC
GAGTTGGACCTGCTCGATGTCGGCGCCGGAAACCTCGATGATCTTGCGGATCAGGGAGTAGCCGTTGGAGTG
CGGGCCGGAGGAGGGCAGGGCGATAAGCGCGTCGCCGGCCTGGACCCTGGAGCCGTCGATGATCTCGGCCTT
TTCCACGACGCCGACGCAGAAGCCGGCCAGGTCATAGTCTTCGCCTTCGTACATGCCGGGCATTTCGGCGGT
CTCGCCGCCGACCAGGGAACAGCCCGCCAGTTCGCAACCGGCACCGATGCCGGTGACTACGGTGGCGGCGAC
GTCGACGTTGAGCTTGCCGGTGGCGTAGTAGTCGAGAAAGAACAGCGGCTCGGCGCCGCAGACCACCAGGTC
GTTGACGCACATCGCCACCAGGTCCTGGCCGATGCTGTCGTGCTTGTTCAGGTTGAGCGCCAGGCGCAGCTT
GGTGCCCACCCCGTCGGTGCCGGATACCAGCACCGGCTGCTTGTAGCCGGCCGGGATTTCGCAGAGGGCGCC
GAAGCCGCCGAGGCCGCCCATCACTTCCGGGCGTGCGGTGCGCTTGGCCACGCCTTTGATGCGTTCCACCAG
GGCTTCGCCGGCGTCGATGTCCACACCAGCGTCCTTGTAGCTCAACGAGGGTTGCTTGCTGCTCATAAATCC
AGGCCTATAGGGGTAATTCGGAGATCGGCCGGCCGCCCAGGCGTGCAACGCTGTTTGCCGGTTTTGAAGGCG
CGCGATTTTATCAGGCTTGCCACGCAGCGGCCATCTCGGTTGCCGCTGGACGGACTGCTGTTTAAGGTATAG
Translation:
MPGPGRSFRDRHRPCDRAPRSGCRPGARVPGHRRPRGWRSPRGSGPAWRPPGGCRSAPAGCCRSRKSAPRHC
RVSASVVFQIVQDHALGVRAAGFDATDLPGLLAGGTQDFQGFLGVALGHADDHADAAVEYAMHLGLVDVALF
LQPVEYRRTVPAGDIDHGLGVVRQDARDVVQQAAAGNVSHGLDRAGLLDQLQQRLDVDAGRRHQQVGQRLAV
ELDLLDVGAGNLDDLADQGVAVGVRAGGGQGDKRVAGLDPGAVDDLGLFHDADAEAGQVIVFAFVHAGHFGG
LAADQGTARQFATGTDAGDYGGGDVDVELAGGVVVEKEQRLGAADHQVVDAHRHQVLADAVVLVQVERQAQL
GAHPVGAGYQHRLLVAGRDFAEGAEAAEAAHHFRACGALGHAFDAFHQGFAGVDVHTSVLVAQRGLLAAHKS
RPIGVIRRSAGRPGVQRCLPVLKARDFIRLATQRPSRLPLDGLLFKV*
AnnotationID:5580GeneID:5578
AnnotatorUID: danlee
Modification Date/Time: 2004-05-10 15:03:08
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15442
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28293
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48580How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 334885Stop: 336324
Length: 1440
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCCAGGGCCTGGTCGAAGCTTTCGCGATCGGCATAGGCCTTGTGATCGAGCACCTCGGTCTGGATGCCGG
CCTGGCGCGCGCGTTCCAGGCCATAGGCGTCCGCGCGGTTGGAGATCACCGCGCGGATCCGGGCCGGCGTGG
CGCCCTCCCGGAGGCTGTCGATCAGCGCCTGCAGGTTGCTGCCGGAGCCGGAAATCAGCACCACGACATTGC
AGAGTTTCGGCATCAGTGGTTTTTCAGATTGTTCAGGACCACGCGCTCGGCGTCCGCGCCGCAGGTTTCGAT
GCGACCGATCTGCCAGGGTTGCTCGCCGGCGGCACGCAGGACTTCCAGGGCTTTCTCGGCGTCGCTCTGGGC
CACGCAGATGACCATGCCGACGCCGCAGTTGAGTACGCGATGCATCTCGGTCTCGTCGACGTTGCCCTGTTC
CTGCAGCCAGTCGAATACCGCCGGACGGTTCCAGCTGGCGACATCGATCACGGCCTGGGCGTTGTCCGGCAG
GACGCGCGGGATGTTGTCCAGCAGGCCGCCGCCGGTAATGTGAGCCATGGCCTTGACCGCGCCGGTCTGCTT
GATCAGTTGCAGCAGCGGCTTGACGTAGATGCGGGTCGGCGCCATCAGCAGGTCGGCCAGCGGCTTGCCGTC
GAGTTGGACCTGCTCGATGTCGGCGCCGGAAACCTCGATGATCTTGCGGATCAGGGAGTAGCCGTTGGAGTG
CGGGCCGGAGGAGGGCAGGGCGATAAGCGCGTCGCCGGCCTGGACCCTGGAGCCGTCGATGATCTCGGCCTT
TTCCACGACGCCGACGCAGAAGCCGGCCAGGTCATAGTCTTCGCCTTCGTACATGCCGGGCATTTCGGCGGT
CTCGCCGCCGACCAGGGAACAGCCCGCCAGTTCGCAACCGGCACCGATGCCGGTGACTACGGTGGCGGCGAC
GTCGACGTTGAGCTTGCCGGTGGCGTAGTAGTCGAGAAAGAACAGCGGCTCGGCGCCGCAGACCACCAGGTC
GTTGACGCACATCGCCACCAGGTCCTGGCCGATGCTGTCGTGCTTGTTCAGGTTGAGCGCCAGGCGCAGCTT
GGTGCCCACCCCGTCGGTGCCGGATACCAGCACCGGCTGCTTGTAGCCGGCCGGGATTTCGCAGAGGGCGCC
GAAGCCGCCGAGGCCGCCCATCACTTCCGGGCGTGCGGTGCGCTTGGCCACGCCTTTGATGCGTTCCACCAG
GGCTTCGCCGGCGTCGATGTCCACACCAGCGTCCTTGTAGCTCAACGAGGGTTGCTTGCTGCTCATAAATCC
AGGCCTATAGGGGTAATTCGGAGATCGGCCGGCCGCCCAGGCGTGCAACGCTGTTTGCCGGTTTTGAAGGCG
CGCGATTTTATCAGGCTTGCCACGCAGCGGCCATCTCGGTTGCCGCTGGACGGACTGCTGTTTAAGGTATAG