ViewGene

Locus Name:
GeneID:
Location:

GeneID:5572
TrivialName: PA14_52360
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 09:09:46
LocusName:PA14_52360
PAO1 Ortholog Locus:
Sequence Length:1335
Protein Length:444
Start: 4648795
Stop: 4647461
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGCCGCCCGGCAGTTCGAGCTTCTCGCCGACGGCCTGGGGTTGGGTACAGCCGCTTTCGTCCTTTTCTTC
GGCGCCATAGATGCAGAACACCTTGGCCGCCGGCAACCTGGCCATTTCCGGGCCGGTGGCGGCTTCCTCGCC
GGCCTTGCCCAGCCAGCCTTCCACTTCGATCTCGAAGCTGCCGGTCCGCGCCAGCGCCAGCAGGAGCATGGC
TTTCACTTGCTGCTGGTCCTTTCCGGGCAGGCGGTTGTAGATCGCCGGCAGGATGTCGGCGCCGAACGAGTA
GCCGGCCAGGACGAAACGTTTCGCGCCCCACTTCTCGCGGTAGTGTTGCATCAGCTTGGAGAGGTCGGCGGC
GCTCTGTTCCGGGCTCTTGTGTTGCCAGTAGTAGCGCAGGGTGTCGATGCCGACCACCGGGTAGCCCATGCT
CGCCATATGCTCGGCAGAGTCCTTGTCCAGGTCGCGCCAGCCGCCGTCGCCGGAATAGAACAGGGTGACGAT
GTCCGAGGGTTGCGCCGCGGGGACCTCGAGTACCGGCAGGGCCTCGGCGTTGCCTTGCAGTTGCAGGCGCAA
CTTATGGGCGAGCACGTCGGACAGCGGGGTGTCGTAGTCGCTGATGCTGGTTTCCGCGCTCGACTGCTTGCG
GACGAAGACCGCGGTGTCGTCGTCCGGGTTGTCGTTCCAGGCCAGCAGCCACTGGCCGTGCGCTGCCTGGTG
CGGCAGCGGGGCGTCGCAGTCGCGCTCGGCCAGGGCAATGTCGAAACCGACCGAGAGCGCCTTGGCCTTGTC
GTCGTCCTGGCTGGCGAGCCAGCGCCAGGCGGTGGTCGAGCCCGGGCCGATGCCGGCGACCAGGTTCGGCTT
GCCGCCGAGGCGGGCAATGACCGCTTCGAGCCGGGACTGCTGCGCCCTGCAATCGCCGTTTTCCGGGGGGAA
GTACTGGATCACCCGGGCGGCGCTGTCGTGAGCCAGGTTCAGCATCTGGGCGTCGTTCAGTTGCTGTTCGGG
GGCGGCGATCACCACCACCCGCGAGCGCGGCTTCTCGCCGGGTTCGGCAAGGGTGGCGTGGCCGCCGTCGTC
GAGGGCCAGGGCTTCCAGTTTCGCCTGGGCCGCCGGTCGGCTCCAGAGCAGCAGGGCGGCACCGACGATCAG
CACCAGGGCGGCGACCAGAAAACGGCGCCAGTGACGTTTCACGACAGACATATCAGCGTTTCACCAATCCAG
TCAGGCCGCCGGCGATCAGCGCGGCGGTATCGGCCAGGGCCACCAGCGGGTCGAGCCCGGCTGGCACGGCCA
GGTAGCGGGGTTCCCAGTCGGGCTGGAACTTGTCCTTGA
Translation:
MAARQFELLADGLGLGTAAFVLFFGAIDAEHLGRRQPGHFRAGGGFLAGLAQPAFHFDLEAAGPRQRQQEHG
FHLLLVLSGQAVVDRRQDVGAERVAGQDETFRAPLLAVVLHQLGEVGGALFRALVLPVVAQGVDADHRVAHA
RHMLGRVLVQVAPAAVAGIEQGDDVRGLRRGDLEYRQGLGVALQLQAQLMGEHVGQRGVVVADAGFRARLLA
DEDRGVVVRVVVPGQQPLAVRCLVRQRGVAVALGQGNVETDRERLGLVVVLAGEPAPGGGRARADAGDQVRL
AAEAGNDRFEPGLLRPAIAVFRGEVLDHPGGAVVSQVQHLGVVQLLFGGGDHHHPRARLLAGFGKGGVAAVV
EGQGFQFRLGRRSAPEQQGGTDDQHQGGDQKTAPVTFHDRHISVSPIQSGRRRSARRYRPGPPAGRARLARP
GSGVPSRAGTCP*
AnnotationID:5574GeneID:5572
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 09:09:03
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15439
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28281
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48574How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 305112Stop: 306446
Length: 1335
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCCGCCCGGCAGTTCGAGCTTCTCGCCGACGGCCTGGGGTTGGGTACAGCCGCTTTCGTCCTTTTCTTC
GGCGCCATAGATGCAGAACACCTTGGCCGCCGGCAACCTGGCCATTTCCGGGCCGGTGGCGGCTTCCTCGCC
GGCCTTGCCCAGCCAGCCTTCCACTTCGATCTCGAAGCTGCCGGTCCGCGCCAGCGCCAGCAGGAGCATGGC
TTTCACTTGCTGCTGGTCCTTTCCGGGCAGGCGGTTGTAGATCGCCGGCAGGATGTCGGCGCCGAACGAGTA
GCCGGCCAGGACGAAACGTTTCGCGCCCCACTTCTCGCGGTAGTGTTGCATCAGCTTGGAGAGGTCGGCGGC
GCTCTGTTCCGGGCTCTTGTGTTGCCAGTAGTAGCGCAGGGTGTCGATGCCGACCACCGGGTAGCCCATGCT
CGCCATATGCTCGGCAGAGTCCTTGTCCAGGTCGCGCCAGCCGCCGTCGCCGGAATAGAACAGGGTGACGAT
GTCCGAGGGTTGCGCCGCGGGGACCTCGAGTACCGGCAGGGCCTCGGCGTTGCCTTGCAGTTGCAGGCGCAA
CTTATGGGCGAGCACGTCGGACAGCGGGGTGTCGTAGTCGCTGATGCTGGTTTCCGCGCTCGACTGCTTGCG
GACGAAGACCGCGGTGTCGTCGTCCGGGTTGTCGTTCCAGGCCAGCAGCCACTGGCCGTGCGCTGCCTGGTG
CGGCAGCGGGGCGTCGCAGTCGCGCTCGGCCAGGGCAATGTCGAAACCGACCGAGAGCGCCTTGGCCTTGTC
GTCGTCCTGGCTGGCGAGCCAGCGCCAGGCGGTGGTCGAGCCCGGGCCGATGCCGGCGACCAGGTTCGGCTT
GCCGCCGAGGCGGGCAATGACCGCTTCGAGCCGGGACTGCTGCGCCCTGCAATCGCCGTTTTCCGGGGGGAA
GTACTGGATCACCCGGGCGGCGCTGTCGTGAGCCAGGTTCAGCATCTGGGCGTCGTTCAGTTGCTGTTCGGG
GGCGGCGATCACCACCACCCGCGAGCGCGGCTTCTCGCCGGGTTCGGCAAGGGTGGCGTGGCCGCCGTCGTC
GAGGGCCAGGGCTTCCAGTTTCGCCTGGGCCGCCGGTCGGCTCCAGAGCAGCAGGGCGGCACCGACGATCAG
CACCAGGGCGGCGACCAGAAAACGGCGCCAGTGACGTTTCACGACAGACATATCAGCGTTTCACCAATCCAG
TCAGGCCGCCGGCGATCAGCGCGGCGGTATCGGCCAGGGCCACCAGCGGGTCGAGCCCGGCTGGCACGGCCA
GGTAGCGGGGTTCCCAGTCGGGCTGGAACTTGTCCTTGA