ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5563

TrivialName: PA14_52830

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_52830

PAO1 Ortholog Locus:

Sequence Length: 1887

Protein Length: 628

Start: 4683566

Stop: 4685452

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA46093.1| (X64876) orfA [Bordetella pertussis] Identities = 56/198 (28%), Positives = 74/198 (37%), Gaps = 39/198 (19%)

Sequence:

GTGGTCGAGGTCCTCGGCGCCGATGCCGGCGACCAACAGGGTCTTCACCCAGTCGTAGCTGGCGACCATGAA
CAGCCCGGCATAGCCCAGGCAGCAGAGGCAGGCGAGTATCCCGATCAGGCGCTGCAAGGGACGCGGCGCCAG
GCGCACCAGGGCGTCCACCCCGAGGTGGCCGGCGGTGCGTACGCCGTAGGCGATGCCGAGGAAGATCAGCCA
GCCGAACAGCGCCTTGGTCAGCGCGTTGCTCCAGGACATGTCCTGGGCTACCCCGAGGATCGCGTCGCCCAC
CGAGTACAGCGGAGCCCGCAGTGCCGGCAGGCGGTCGCCGAGGTCGTAGAACAGGGTGAAGACGTTGGTCAT
CACCACATAGAGGAAGGTCACCAGCGTCATCGCCGCCAGCAGGAAGACGATAGCGCCCTCCTCGAAGCGGTT
CCAGACGCGCACGAGTCGATTCATCGCAGCGTTCTCCACAATGCCCCGCCCGGCCGGACGGGGCCGGACGGG
TCAATCGGGACGGTTGGAAGCTTCGGCGGCCTGGAGCAGGTCAGCGCCGACATTGCCGCGGAATTTCTGCCA
TACCGGCTGCATCGCCTGGCGCCAGTCGGCGCGCTGCTGCGGGCTCAGGGTATGGATCTCGCTGACGCCACT
GGCGAGGATGCGCTGGCGGGCGTCGCGGTTGAGGCGCTCGGCTTCGATGTTCACCTGCACGGTGACCTCGTC
CATGATCCGCTGCAGCGCTTCGCGGATGTCCGCCGGGAGGCCGTTCCAGAACTTCGCGTTGGTGATCACCAT
GTAGTCCACCAGGCCGTGGTTGGACTCGGTGAAATACTTCTGCACCTCGTTGACCTTCTGGCTCTCGTAGTT
CGACCAGGTGTTCTCGGTGCCATTCACCACGCCGGTCTGCAAGCCCTGGTAGACCTCGGCGAAGGACATCTT
CCGGGAGATCGCGCGGAGCTGGCGGAACTGCTCGTTGAGCACGTCGGACGCCTGCACGCGGAATTTCAGCCC
GCGCGCGTCTTCCGGCTCCAGCAACGGGCGATTGGCGGAGAGCTGCTTCATCCCGTTGTGCCAGTAGGCCAG
GCCGAGGATGCCCTTGCCCTGCATGCTGGTCAGCAGGGCGCGCCCCTGCGGGCTGCGCTGGAAGCGGTCGAC
CGCCTGGATGTCGTCGAAGAGGAACGGCAGGTCGAAGATCTGCACCTTGCGCGTGTACTGCTCGAACTTGGC
CAGGGACGGCGCCAGCATCTGCACGTCGCCCAGCAGCAGCGCCTCCATTTCCTTGCCATCGCCGAACAGCGA
CGAGTTGGGATAGACGTCCACCTCGACCCGGCCGCCCAGGCGCTGTTCGACGAGCTTCTTGAACAGCAGCGC
GCCCTGGCCCTTGGGCGTGTTTTCCGCGACCACGTGGGAAAACTTGATGACGATAGGCTGCGCGGCATTCGC
CAGGCAGGAGCCACCGATCGCCAGGGCGCACAACAGCGCCCGTACCATCGTCTTGAACATTTCGTGACCTCA
GATTGTTGTTGTGCTTTCGAGGTATCGACGAGCCTGACGCAGCCGGCACGTTCGGAGAATTCGCCATTGCTC
AAGCCCGCGTTCGCGTCTGTCGAACGCGTTCAGCCACCCTCCCCGGCCCGCTCCAGCAGGCGTCGCGCGCGT
CCCAGCACCGGCGCGTCGACCATCTCGCCGTCGACCACGAAGACGCCGGCACCGGAGGCGCCGGCCTCTGCC
ACCCGACGCGCCCACTCCAGTTCCGCGAGACTCGGCATCAATGTCTGGTGGATCGGCTCGACCTGGCTCGGA
TGGATGCACAGCAACCCGCCGAAGCCCATGTCGCGAGCGAAGCGCACTGCCTCGACCAGTCCGACACGGTTC
TGGATCGCCGGGTAG

Translation:

MVEVLGADAGDQQGLHPVVAGDHEQPGIAQAAEAGEYPDQALQGTRRQAHQGVHPEVAGGAYAVGDAEEDQP
AEQRLGQRVAPGHVLGYPEDRVAHRVQRSPQCRQAVAEVVEQGEDVGHHHIEEGHQRHRRQQEDDSALLEAV
PDAHESIHRSVLHNAPPGRTGPDGSIGTVGSFGGLEQVSADIAAEFLPYRLHRLAPVGALLRAQGMDLADAT
GEDALAGVAVEALGFDVHLHGDLVHDPLQRFADVRREAVPELRVGDHHVVHQAVVGLGEILLHLVDLLALVV
RPGVLGAIHHAGLQALVDLGEGHLPGDRAELAELLVEHVGRLHAEFQPARVFRLQQRAIGGELLHPVVPVGQ
AEDALALHAGQQGAPLRAALEAVDRLDVVEEERQVEDLHLARVLLELGQGRRQHLHVAQQQRLHFLAIAEQR
RVGIDVHLDPAAQALFDELLEQQRALALGRVFRDHVGKLDDDRLRGIRQAGATDRQGAQQRPYHRLEHFVTS
DCCCAFEVSTSLTQPARSENSPLLKPAFASVERVQPPSPARSSRRRARPSTGASTISPSTTKTPAPEAPASA
TRRAHSSSARLGINVWWIGSTWLGWMHSNPPKPMSRAKRTASTSPTRFWIAG*

AnnotationID:5565 GeneID:5563

AnnotatorUID: danlee

Modification Date/Time: 2004-05-03 15:03:15

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15428

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28263