ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5560

TrivialName: PA14_52970

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_52970

PAO1 Ortholog Locus:

Sequence Length: 1788

Protein Length: 595

Start: 4696209

Stop: 4697996

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAB70627.1| (AL939123) large Ala/Glu-rich protein [Streptomyces coelicolor A3(2)] Identities = 85/375 (22%), Positives = 138/375 (36%), Gaps = 49/375 (13%)

Sequence:

TTGTGTACTCGGCGGCGAAAATCCCGCCCCTCGGCGAACATCCTGGCCGTCTTCCCCGCGCCTCACCGCGCT
GCCGCCCTTCCACAGGGGCCGACGCCTCCGCCGTTTCTTTCCCAGCCTGCAACAAACCGGCAAGCATGCCGC
TCAGCCCTCGCCTTGCCCCACGCCATGCTGGCGCAGCTTGTTCGCCGCCGTGGTATGCGAAACGCCGAGGCG
CTTGCCCAACTGGCGGCTGCTCGGATGCTCGCGGAACAGGCGCTCCAGCACCGCCTTCTCGAAGCGCCCGAC
GATGGCGTCGAGGTCTCCTTCCAGGGAAAAATCCCCCAGCGGCTGCGGTGCGCCGTAGTCCGGCAGGCGGAT
GTGCTCGGCCTTGACCGTTCCCCCTTCGCACAGCGAAACCGCCTGGAACAGCACGTTTTCCAATTGCCGCAC
GTTGCCCGGCCAGTGGTAGCGTTCGAGACGTTCCAGCGCCTGCGCGGAAAGCTTCGGCAGGCCGCAGCCGAT
CTGCCGGCTGGCCTGGTCGAGGAAATGCTCGGCGAGCGGCGCCAAGCCATCCAGGCACTCGCGCAGCGGCGG
GATGTGCAGCGAGAGCACATTGAGACGGTGATAGAGGTCCTGGCGGAATTCGCCCTTGGCGCAGAGTTCGGA
CAGGTCTACCTGGGTGGCGCAGATCACCCGCACGTCCAGGTACACCTCCTCGTCGCTGCCGACCCGGCGGAA
ACAGCCGTCCTGCAGGAAGCGCAACAGCTTGGCCTGCAGGCGCGGGCTCATCTCGCCGACGCCGTCGAGGAA
CAGCGTACCGCCGGCGGTAAGCTCCAGCAGGCCGAGCTTGCCTTCCGGACGGGCGCCCTCGAAGGCTCCCGG
ACCATAGCCGAACAGCTCGGTCTCGGCCATGGATTCCGGCAGGCCGGCGCAGTTCAACGCCATGAACGGCGA
CTGCCCGCGCGGGCTGGCCAGGTGGCAGGCGCGCGCCAGCAGCTCCTTGCCGGTGCCGGTCTCGCCCTCGAT
CAGCAGCGGCGCGTCCAGCGGCGCCATGCGCCGCGCCTCGCGGACCACCGCGGCCATTACCCGCGAACTCTG
GAAGATACTGTCGAAGCCACGCAGCTCCTGCTTGCGCACATGGTAGATGCGCTCGCCGACGCGATCCGCGCG
ATGCAGGGTCAGCACCGCTCCAGCCAGCGCCTCGCTCTCGTCGTGCTCGGATTGCAGCGGCGCGATGTCGGC
GAGGAACACGTCGCCCTTCACCTTCACCCGCAGCCCGTTGATCCGCGCCTTGTTGGCGCGCACCAGTTCGGG
CAGGTCGAGGTCCTCGACATAGCGCGACAGCGGAATCCCCGGCACCTCGTCGACGCGCACGCCGAGCAATTG
CGCGGCGGCACGGTTGGCGGCGACGATCTGCCCGCCCATGTCCACCGAGAGCACCGGGAAGTCCAGGGCGGC
GAGCAGCGCGTTGAGTTCCAGGTGCCGGCGCTCGCTGGGCATCAGGCCGACGCGCTTGACCCCGAAGACCCC
CGGCACCGCCTCCAGCTTGGGCCGCAGCGACTGCAACTGGAGGTTGATCATGTTCGGACAGAGCAGGTAGAT
GGCGTTGCCCTGGTCGCCGCCGACTTCGCCGCGATTGACGTTGATGCCGTAGTCGACCAGCAGGTTGAGGAT
GTCGCGGAGGATGCCTACACGGTTCTGGCAGTGCACTTTGATACGCATGGCGTGGCCCGGTGTTGTCGTTCT
GATGGGCTCGCGGCCGGTTTTTTTAACTCCCGGCCGGAAATTTCCGTCAAGAATATGTGA

Translation:

MCTRRRKSRPSANILAVFPAPHRAAALPQGPTPPPFLSQPATNRQACRSALALPHAMLAQLVRRRGMRNAEA
LAQLAAARMLAEQALQHRLLEAPDDGVEVSFQGKIPQRLRCAVVRQADVLGLDRSPFAQRNRLEQHVFQLPH
VARPVVAFETFQRLRGKLRQAAADLPAGLVEEMLGERRQAIQALAQRRDVQREHIETVIEVLAEFALGAEFG
QVYLGGADHPHVQVHLLVAADPAETAVLQEAQQLGLQARAHLADAVEEQRTAGGKLQQAELAFRTGALEGSR
TIAEQLGLGHGFRQAGAVQRHERRLPARAGQVAGARQQLLAGAGLALDQQRRVQRRHAPRLADHRGHYPRTL
EDTVEATQLLLAHMVDALADAIRAMQGQHRSSQRLALVVLGLQRRDVGEEHVALHLHPQPVDPRLVGAHQFG
QVEVLDIARQRNPRHLVDAHAEQLRGGTVGGDDLPAHVHREHREVQGGEQRVEFQVPALAGHQADALDPEDP
RHRLQLGPQRLQLEVDHVRTEQVDGVALVAADFAAIDVDAVVDQQVEDVAEDAYTVLAVHFDTHGVARCCRS
DGLAAGFFNSRPEISVKNM*

AnnotationID:5562 GeneID:5560

AnnotatorUID: danlee

Modification Date/Time: 2004-05-03 12:12:20

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15424

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28256