ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5556

TrivialName: PA14_53130

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_53130

PAO1 Ortholog Locus:

Sequence Length: 2355

Protein Length: 784

Start: 4711359

Stop: 4709005

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Inactivated (overlaps GeneID240, PA14_53140). Homology: dbj|BAC69248.1| (AP005027) putative oxidoreductase [Streptomyces avermitilis MA-4680] Identities = 192/641 (29%), Positives = 220/641 (34%), Gaps = 137/641 (21%)

Sequence:

ATGTCGGCGGCGAAAGCCTCTGGTCGAAGGGCCAGAAGGATGCCATCTACTATCTCACCCTCATGCCGACTC
ACGCGCCGACGAAGACTTCCGCCGCTACGAGGAGGCCATCGCGATCCCCCTCGGCGACCGCGAGATGCGCCT
TGCCCTGGACCAGCCCGACCCGGACATCGAGGCGGCCCGCCAGGGCATCCTCAAGGGCGGCAACCATGCCGA
CGACGTTACCGCGATCATCTGGCTGTACCGCAACTTCCACGACTTCAGTTACTTCGAGCGCGCCATCGAGCT
GTGGCTGGTGGGCGACAAGTACGTCATGGAACTGATCGACGTCGCCGGCAAGATGCGCGCGGGCATCGGCAC
CGGGCAGGCCAGTGCCGAGCAGGTGCAACAGTGGAAGACCGAGATCCACGCGATCAACGAGAAGGTCACGCC
GGCGGCCAAGGCCTTCAGCGACGCCCTCGGCGAGGGCTCGCGGGCCTTGCTCAGGCTGCTGCTGGTGGCCAA
CCTGACCACCGCCAGCGTGCTCATCCTCCTGGCGTTCCTGCGTACCCGGCAGCAACTGATGCAGCGCCAGGA
AGTGGAGAACGCCCTCGATGCCGAGCGCGAACGGGCCCAGATCACTCTGGCCTCGATCGGCGACGGAGTGAT
CACCGCCGACACCCAGGGGGGCATTTCCTACCTCAACCCGGCCGCCGAGCAGATGACCAACTGGACGCTGGA
CAAGGCCCGCGGCCTGCCCCTGGCGTCGCTGTTCCGGATCGTCGACGAAAGCTCGCGGGAGGAGGGCATGCT
GCTGATCGAGCAGATCCTCAGCGGCGAGATCGACGGCGGCCGCGAGCATTCCAAGCTGGTCCTGCGCCACGA
CGGCAGCAGCGTGCCGGTGACCCTGGTGGGCGCGCCGATCCATCGCGGCGGCGAGATCACCGGGGTGGTCCT
GGTGCTTCACGACATGACCCGCGAGCGCCAGTACATGGCGCGCCTGTCCTGGCAGGCGACCCACGATGCGTT
GACCGGGCTGACCAACCGCCGCGAGTTCGAGTATCGCCTGCAGATAGCGCTGGAACGCCTGGAGCGCAACAG
CGGGCGGCACGCCCTGATGTTCCTCGACCTGGACCAGTTCAAGCTGGTCAACGACACCTGCGGCCACGCCGC
CGGCGACGAACTGCTGCGCCAGGTCTGCACCCTGCTGCAACAAGGCTTGCGCGAGGGCGACACGCTGGCGCG
GCTGGGCGGCGACGAGTTCGGCATCCTGCTGGAGAACTGCCCGGCGGAAAAAGCCGTGGAGATCGCCGACCA
TCTGCGCAAGACGGTCCAGGACCTGCACTTCACCTGGAGCGGGCAGCCGTTCAACTGCACCGTCAGCGTCGG
CCTGGTGCACCTGCTGCCGGGTATCTCGACCCTCGAGGAGGCACTGCGCTCCGCCGACATGGCCTGCTACAT
GGCCAAGGAAAAGGGGCGCAATCGGGTCCAGGTGTTCCATCAGGACGACGTCGAACTGTCGATGCGCTTCGG
CGAGATGACCTGGGTCCAGCGCATCCACCTGGCGCTGGAGGAAGACCGCTTCAGTCTCTATGCCCAGCCCAT
CGTGCCGCTGGGCGAAGGTGCGGAGGAGGGCTTGCACGTCGAACTGCTGCTGCGCCTGCGCGACGAGGGCGG
GCGCCTGGTGCCGCCGCTGAGCTTCATACCCGCCGCCGAGCGCTACGGCCTGATGACGCTGATCGATCGCTG
GGTGGTGGAGAATGCCTTCCGCACCCTCGTCGAGCGCGCCCAGGACCCTCGCGCCGAGCCGATCGGCACCTG
CGCCATCAACCTCTCCGGCGCGACCATCGGCGACGAGTCGTTCCTGCAGTTCCTCACCGAGCTGTTCGCCCG
TTACCGCATTCCGCCGCAGACGATCTGCTTCGAGGTCACCGAAACCGTGGCGGTTGCCAACCTGGCCAGCGC
CATCCGCTTCATCAACGAGCTCAAGGACACCGGTTGTCGTTTCTCCCTGGACGATTTCTGCGCCGGCATGTC
GTCCTTCATCTACCTCAAGCACCTGCCGGTGGATTACCTGAAGATCGATGGCAGCTTCGTCAAGGACATGCT
CGAGGATCCCATCGATCGCGCCATGGTCCAGGTGATCAACCATATCGGCCACGTGATGGGCAAACGTACCAT
CGCCGAGTTCGTCGAAACCGTCGAAGTGATGGAGGCGCTGCGCGAGATCGGCATCGACTATGCCCAGGGCCT
GGCCATCGGCGCGCCCCTGCCGTTCAGTCGCCAGCCTCCGGGCGCAGGGCTGGATGCCCAGGGCCTGTGGCC
GAGCCTCGGACAGAACCTCCGGTAGGTGACCGCGGAGCGAAGAAAGAGTAG

Translation:

MSAAKASGRRARRMPSTISPSCRLTRRRRLPPLRGGHRDPPRRPRDAPCPGPARPGHRGGPPGHPQGRQPCR
RRYRDHLAVPQLPRLQLLRARHRAVAGGRQVRHGTDRRRRQDARGHRHRAGQCRAGATVEDRDPRDQREGHA
GGQGLQRRPRRGLAGLAQAAAGGQPDHRQRAHPPGVPAYPAATDAAPGSGERPRCRARTGPDHSGLDRRRSD
HRRHPGGHFLPQPGRRADDQLDAGQGPRPAPGVAVPDRRRKLAGGGHAADRADPQRRDRRRPRAFQAGPAPR
RQQRAGDPGGRADPSRRRDHRGGPGASRHDPRAPVHGAPVLAGDPRCVDRADQPPRVRVSPADSAGTPGAQQ
RAARPDVPRPGPVQAGQRHLRPRRRRRTAAPGLHPAATRLARGRHAGAAGRRRVRHPAGELPGGKSRGDRRP
SAQDGPGPALHLERAAVQLHRQRRPGAPAAGYLDPRGGTALRRHGLLHGQGKGAQSGPGVPSGRRRTVDALR
RDDLGPAHPPGAGGRPLQSLCPAHRAAGRRCGGGLARRTAAAPARRGRAPGAAAELHTRRRALRPDDADRSL
GGGECLPHPRRARPGPSRRADRHLRHQPLRRDHRRRVVPAVPHRAVRPLPHSAADDLLRGHRNRGGCQPGQR
HPLHQRAQGHRLSFLPGRFLRRHVVLHLPQAPAGGLPEDRWQLRQGHARGSHRSRHGPGDQPYRPRDGQTYH
RRVRRNRRSDGGAARDRHRLCPGPGHRRAPAVQSPASGRRAGCPGPVAEPRTEPPVGDRGAKKE*

AnnotationID:5558 GeneID:5556

AnnotatorUID: diggins

Modification Date/Time: 2006-02-09 08:08:27

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11097

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28248