ViewGene

Locus Name:
GeneID:
Location:

GeneID:5555
TrivialName: PA14_53170
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_53170
PAO1 Ortholog Locus:
Sequence Length:1527
Protein Length:508
Start: 4713651
Stop: 4715177
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGGCCGTTGCGCTCGGCCAGCAGGGTCGGGAACCCGGCGATGCCAAGATCCTGGACCCAGGCGAAATCGGC
GGCGGTGGCGTCACGCGCCTCGCCGCTGTCGAAGGCCGCGGCGAACTCGATGCGTGGAATTCCCACCGCTTC
CGCCAGGTCGGCGAGCACCGCCGCCTGGGTGACATCGCGACCCTCGGCGTAGAACGCCCGCTGGATCGCCCT
CACCAGCGGCCAGGCGCTTTCCTCGTCGAGGCTGCGCGCCGCCACCAGGGCCCGGCAGGCCGGCTCGGTGTC
ATAGACGAAGCCTTCGGGCAACGCGTCGTCGAAGCGGAACGGCTGGCCGGTGGTCTGCTGCACGGTCTGCCA
GTGGCCGAGGATGTAGCCGCGGGTATTCGGGTCGAGCGCCGCGCCGTGGCCGGCGCGCAGGCCACCGGCTAC
CAGGTGGAAAGCGACGCCGTCGGCGGCCGCCTGCCGGGACAGCGCCTCGGCGACCGGGGCGAAGCCCCAGCA
CCAGGAACACATGGGGTCCATCACGTACAGCAGGCGGGCCTTGGCCAAGGTTCAGTTCTCCAGCGTGGACTG
GCGCGGATCGCGACCGAGCGGGTGCGGCTGGTTGCGCTGCCGCGCCAGTTCGATCTGTTTCTGCCGCTCGCG
GGCGCCGGCGCGGGTCTTCTCGCTCAGCGAGTCCCAGCAGTGCGGACAGCTGATGCCGGGCACGTAGTGCTC
GGACTGGCGGTCTTCCAGCGAAACCGGGTTGCGGCAGGCGTGGCACTGATCGTACTCGCCCTCGCTAAGATC
GTGGCGCACGGTCACGCGGTTGTCGAATACGAAGCAGTCGCCGCGCCACAGGCTCTGTTCCTGCGGCACCTC
TTCGAGGTACTTGAGGATGCCGCCCCTGAGGTGGAAGACCTCCTCGAAACCGGCGCCGAGCATGTAGCTGGA
AGCCTTCTCGCAGCGGATGCCGCCGGTGCAGAACATCGCCACCTTCTTGTGCCGCGCCGGGTCGTAGTGGGC
CTTGATGTACTCGGGGAACTCGCGGAACGACCTGGTCTTCGGATCGACCGCGCCCTCGAAGGTGCCGATCGC
CACCTCGTAGTCGTTGCGGGTATCGATCAGCAGGACTTCCGGATCGCTGATCAGGGCATTCCAGTCCTTCGC
CTCGACATACTGGCCGACCTGCTTGTTCGGATCGACGCCAAGCACGCCGAGGGTGACGATTTCCTTCTTCAG
CTTGACCTTGGTGCGGTAGAACGGCTGTTCGTCGCAGTAGGATTCCTTGTGCTCGATATCGGCCAGCCGGGG
ATCGCTGCGCAGCCAGGCGAACAGCGCATCGATGCCTTCGCGGCTACCGGAGACGGTGCCGTTGATGCCTTC
CTCGGCCAGCAGCAAGGTGCCTTTCACACCGTTGTCGAGCAGGGTTTGCAGCAGGGGTTCACGCAGCGCCAC
GTAATCGTCGAGAGTCACGAACTTGTACAGCGCCGCCACGACGATGGATGTCATGGGGATATAGCCTCCAGG
TGGTCGCCCGCGTAA
Translation:
MAVALGQQGREPGDAKILDPGEIGGGGVTRLAAVEGRGELDAWNSHRFRQVGEHRRLGDIATLGVERPLDRP
HQRPGAFLVEAARRHQGPAGRLGVIDEAFGQRVVEAERLAGGLLHGLPVAEDVAAGIRVERRAVAGAQATGY
QVESDAVGGRLPGQRLGDRGEAPAPGTHGVHHVQQAGLGQGSVLQRGLARIATERVRLVALPRQFDLFLPLA
GAGAGLLAQRVPAVRTADAGHVVLGLAVFQRNRVAAGVALIVLALAKIVAHGHAVVEYEAVAAPQALFLRHL
FEVLEDAAPEVEDLLETGAEHVAGSLLAADAAGAEHRHLLVPRRVVVGLDVLGELAERPGLRIDRALEGADR
HLVVVAGIDQQDFRIADQGIPVLRLDILADLLVRIDAKHAEGDDFLLQLDLGAVERLFVAVGFLVLDIGQPG
IAAQPGEQRIDAFAATGDGAVDAFLGQQQGAFHTVVEQGLQQGFTQRHVIVESHELVQRRHDDGCHGDIASR
WSPA*
AnnotationID:5557GeneID:5555
AnnotatorUID: danlee
Modification Date/Time: 2004-05-03 11:11:30
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15416
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28246
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48557How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 240256Stop: 238730
Length: 1527
Start Codon: TTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGGCCGTTGCGCTCGGCCAGCAGGGTCGGGAACCCGGCGATGCCAAGATCCTGGACCCAGGCGAAATCGGC
GGCGGTGGCGTCACGCGCCTCGCCGCTGTCGAAGGCCGCGGCGAACTCGATGCGTGGAATTCCCACCGCTTC
CGCCAGGTCGGCGAGCACCGCCGCCTGGGTGACATCGCGACCCTCGGCGTAGAACGCCCGCTGGATCGCCCT
CACCAGCGGCCAGGCGCTTTCCTCGTCGAGGCTGCGCGCCGCCACCAGGGCCCGGCAGGCCGGCTCGGTGTC
ATAGACGAAGCCTTCGGGCAACGCGTCGTCGAAGCGGAACGGCTGGCCGGTGGTCTGCTGCACGGTCTGCCA
GTGGCCGAGGATGTAGCCGCGGGTATTCGGGTCGAGCGCCGCGCCGTGGCCGGCGCGCAGGCCACCGGCTAC
CAGGTGGAAAGCGACGCCGTCGGCGGCCGCCTGCCGGGACAGCGCCTCGGCGACCGGGGCGAAGCCCCAGCA
CCAGGAACACATGGGGTCCATCACGTACAGCAGGCGGGCCTTGGCCAAGGTTCAGTTCTCCAGCGTGGACTG
GCGCGGATCGCGACCGAGCGGGTGCGGCTGGTTGCGCTGCCGCGCCAGTTCGATCTGTTTCTGCCGCTCGCG
GGCGCCGGCGCGGGTCTTCTCGCTCAGCGAGTCCCAGCAGTGCGGACAGCTGATGCCGGGCACGTAGTGCTC
GGACTGGCGGTCTTCCAGCGAAACCGGGTTGCGGCAGGCGTGGCACTGATCGTACTCGCCCTCGCTAAGATC
GTGGCGCACGGTCACGCGGTTGTCGAATACGAAGCAGTCGCCGCGCCACAGGCTCTGTTCCTGCGGCACCTC
TTCGAGGTACTTGAGGATGCCGCCCCTGAGGTGGAAGACCTCCTCGAAACCGGCGCCGAGCATGTAGCTGGA
AGCCTTCTCGCAGCGGATGCCGCCGGTGCAGAACATCGCCACCTTCTTGTGCCGCGCCGGGTCGTAGTGGGC
CTTGATGTACTCGGGGAACTCGCGGAACGACCTGGTCTTCGGATCGACCGCGCCCTCGAAGGTGCCGATCGC
CACCTCGTAGTCGTTGCGGGTATCGATCAGCAGGACTTCCGGATCGCTGATCAGGGCATTCCAGTCCTTCGC
CTCGACATACTGGCCGACCTGCTTGTTCGGATCGACGCCAAGCACGCCGAGGGTGACGATTTCCTTCTTCAG
CTTGACCTTGGTGCGGTAGAACGGCTGTTCGTCGCAGTAGGATTCCTTGTGCTCGATATCGGCCAGCCGGGG
ATCGCTGCGCAGCCAGGCGAACAGCGCATCGATGCCTTCGCGGCTACCGGAGACGGTGCCGTTGATGCCTTC
CTCGGCCAGCAGCAAGGTGCCTTTCACACCGTTGTCGAGCAGGGTTTGCAGCAGGGGTTCACGCAGCGCCAC
GTAATCGTCGAGAGTCACGAACTTGTACAGCGCCGCCACGACGATGGATGTCATGGGGATATAGCCTCCAGG
TGGTCGCCCGCGTAA