ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5554

TrivialName: PA14_53240

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_53240

PAO1 Ortholog Locus:

Sequence Length: 1554

Protein Length: 517

Start: 4719172

Stop: 4720725

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK62517.1| (AY034092) putative hydroxyproline-rich protein [Micrococcus sp. 28] Identities = 115/416 (27%), Positives = 148/416 (35%), Gaps = 66/416 (15%)

Sequence:

GTGGGGCGGCCTGCCGGCGCTGCTGCAGGGTTTCTTCGACCGCGCCCTGCAGCCGGGCTTCGCCTTCCGCTA
CCGCGGCACCCAGGACAAGGACTGGGAGCAACTGCTGGGCGGGCGCAGCGCCGACCTGCTGGTCTGCCACGA
CCAGCCGCTGTCGCGGCTGCGCTTCCTCAAGGGCccgccgGCGCACCGGCAGATGGTGCGCAGCGTGCTCGG
CGCCTGtggCATCGCCacccgccGcctgGaagAgttcGCgccgaTGCGCagtTccaGCGAGGAACAGCGCCA
GGGTTGGCTGCGTCGCGCCGAACAGCTCGGCAGCCAGGTCTAGTTCCCTTCCCGCCCGGCTGCGGCCGGGCG
CGGACACTGATCGTTCTGACAGGTCCGCCACCTTCCCGCCGGCTTGCCTTCCCCGCCCCCATGGCGGCCCTT
TGCCTGCCTCTACCGGCTCACAGTGCGGGTGCCGACCGCTTTGCATTCCGCGACATCCATCAGGAGTGGGTA
GCGAATCTGACCGGCCCGTCACATTTGGTAGGGACCTCAAACCGGCACCGAGGGCTAGGATCAGCCCGCTTC
GAAATGAATCCGGTTCTGGAAAAAAGGACTTGTCATGAAACACTACTCAGCCACCCTGGCACTCCTGCCACT
CACCCTCGCCCTGTTCCTGCCCCAGGCAGCCCATGCCCACGGCTCGATGGAAACGCCGCCCAGCCGGGTCTA
CGGCTGCTTCCTCGAAGGTCCGGAGAATCCCAAGTCGGCCGCCTGCAAGGCCGCCGTCGCCGCCGGCGGCAC
CCAGGCGCTGTACGACTGGAATGGCGTCAACCAGGGCAACGCCAACGGCAACCACCAGGCGGTGGTCCCCGA
CGGCCAGCTCTGCGGCGCCGGCAAGGCACTGTTCAAGGGCCTGAACCTGGCTCGCAGCGACTGGCCGAGCAC
CGCCATCGCCCCGGACGCCAGCGGCAACTTCCAGTTCGTCTACAAGGCCAGCGCGCCGCACGCGACCCGCTA
CTTCGACTTCTACATCACCAAGGACGGCTACAACCCCGAGAAGCCGCTGGCCTGGAGCGACCTGGAACCCGC
GCCGTTCTGCTCGATCACCAGCGTCAAGCTGGAGAACGGCACCTACCGGATGAACTGCCCGCTGCCCCAGGG
CAAGACCGGCAAGCATGTGATCTACAACGTCTGGCAGCGTTCGGACAGCCCGGAAGCCTTCTACGCCTGCAT
CGACGTGAGCTTCAGCGGCGCCGTCGCCAACCCCTGGCAAGCGCTGGGCAACCTGCGCGCGCAGCAGGACCT
GCCGGCCGGTGCCACCGTCACCCTGCGCCTGTTCGATGCCCAGGGCCGCGACGCCCAGCGTCACAGCCTGAC
CCTGGCCCAGGGCAACAACGGTGCCAAGCAATGGCCGCTGGCGCTGGCGCAGAAGGTCAACCAGGACTCCAC
CCTGGTCAACATCGGCGTGCTGGATGCCTACGGGGCGGTCAGCCCGGTGGCCAGCTCGCAGGACAACCAGGT
CTACGTGCGCCAGGCCGGCTACCGCTTCCAGGTCGACATTGA

Translation:

MGRPAGAAAGFLRPRPAAGLRLPLPRHPGQGLGATAGRAQRRPAGLPRPAAVAAALPQGPAGAPADGAQRAR
RLWHRHPPPGRVRADAQFQRGTAPGLAASRRTARQPGLVPFPPGCGRARTLIVLTGPPPSRRLAFPAPMAAL
CLPLPAHSAGADRFAFRDIHQEWVANLTGPSHLVGTSNRHRGLGSARFEMNPVLEKRTCHETLLSHPGTPAT
HPRPVPAPGSPCPRLDGNAAQPGLRLLPRRSGESQVGRLQGRRRRRRHPGAVRLEWRQPGQRQRQPPGGGPR
RPALRRRQGTVQGPEPGSQRLAEHRHRPGRQRQLPVRLQGQRAARDPLLRLLHHQGRLQPREAAGLERPGTR
AVLLDHQRQAGERHLPDELPAAPGQDRQACDLQRLAAFGQPGSLLRLHRRELQRRRRQPLASAGQPARAAGP
AGRCHRHPAPVRCPGPRRPASQPDPGPGQQRCQAMAAGAGAEGQPGLHPGQHRRAGCLRGGQPGGQLAGQPG
LRAPGRLPLPGRH*

AnnotationID:5556 GeneID:5554

AnnotatorUID: danlee

Modification Date/Time: 2004-02-03 17:05:50

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

No putative conserved domains identified.

Structural Features:

Genomic Context:

Comment:

ReferenceID:15415

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28245