ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5553

TrivialName: PA14_53280

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_53280

PAO1 Ortholog Locus:

Sequence Length: 1383

Protein Length: 460

Start: 4722591

Stop: 4723973

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK22647.1| (AE005742) ISCc2, transposase, fusion [Caulobacter crescentus CB15] Identities = 101/383 (26%), Positives = 142/383 (37%), Gaps = 74/383 (19%)

Sequence:

TTGCTCTATTCGCAGTCCGCCGTCCTTAAGTCGTGTTCTGCCAGTACGCCGCTCGGCCCCGATGTCCGCCGT
CGGCGGATGCGTAACCGGACGACCCACTGCCCGCGGCTTTCCGAACGGACAAAGAAAAGCCCCGCCGAAGCG
GGGCCTTCCTTGCACGCAGCACTCAGGGCTGTCTTCTCATCAGAGCGAATCGAGATAGCGCTCCACATCCAG
CGCGGCCATGCAGCCGGCGCCGGCCGAGGTGATCGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGC
GAACACACCCGGTACGTTGGTCGCGGTGGCGTTGCCTTCGCGCCCGCCGTTGACCACCAGGTAGCCGTCCTT
CAGGGCCAGTTGCCCTTCGAACAGCGAGGTATTGGGAGTATGGCCGATGGCGACGAACATGCCATCCACGGC
GATCTCCTCGCTGCCACCATCGCGGTTCTTCAGGCGCACGCCGGTGACGCCCATCGTGTCGCCAAGCACCTC
ATCGACCTCGGCGTTGAGCTTGAGCACTATCTTGCCTTCGGCGACCCGCGCCTGCAGCTTGTCCTGGAGGAT
CTTCTCGGCGCGGAAGGTCTCGCGACGATGCACCAGGGTCACCCGGCTGGCGATGTTGGCCAGGTACAGGGC
CTCTTCGACAGCGGTATTGCCGCCGCCGATCACCGCCACTTCGCGGTTGCGGTAGAAGAAACCGTCGCAGGT
GGCGCAGGCCGACACGCCCTTGCCCATGAACGCCTGCTCCGACGGCAACCCCAGGTAGCGCGCGCTGGCACC
GGTGGCGACGATCAGTGCGTCGCAGGTGTAGGTGCCGTTGTCGCCGCGCAGGGTGAACGGCTTGCCGGCCAG
GTCCACGGCATGGATGTGGTCGAAGACAATCTCGGTCTCGAAGCGCTCGGCGTGCTCCTGCATCCGCTGCAT
CAGTGCCGGGCCGGTCAGGCCGTGGGGATCGCCCGGCCAGTTGTCGACCTCGGTGGTGGTGGTCAACTGGCC
GCCGGCCTGCATGCCGGTGATCAGCAGCGGCTTGAGGTTGGCACGCGCGGCGTAGACAGCCGCGCTGTAACC
GGCGGGACCGGAACCGAGGATGATCACTCGGGCGTGGCGGAGGGTATCGGGCATCTCGTCGGACTCCTGCCG
ACATCAGCGTCGGCGCGAATAAAAACGGGGCCACCAAAGCACATGGGGAAGGCTTGGAAGGAGCGGTCGCCC
CGGAAAAAGGTCGGTCGGGCACACTTCGCGCCCGGCAGCGGGATCACAGTGCCTCGGCGTTCTCGGCCAGGT
ACGAGGCCACGCCCTCGGCGCTCGCCTTCATGCCTTTCTGGCCCTTGCGCCAACCGGCCGGGCAGACCTCGC
CGTGTTCCTCGGTGA

Translation:

MLYSQSAVLKSCSASTPLGPDVRRRRMRNRTTHCPRLSERTKKSPAEAGPSLHAALRAVFSSERIEIALHIQ
RGHAAGAGRGDRLAVDVVGHVAGGEHTRYVGRGGVAFAPAVDHQVAVLQGQLPFEQRGIGSMADGDEHAIHG
DLLAATIAVLQAHAGDAHRVAKHLIDLGVELEHYLAFGDPRLQLVLEDLLGAEGLATMHQGHPAGDVGQVQG
LFDSGIAAADHRHFAVAVEETVAGGAGRHALAHERLLRRQPQVARAGTGGDDQCVAGVGAVVAAQGERLAGQ
VHGMDVVEDNLGLEALGVLLHPLHQCRAGQAVGIARPVVDLGGGGQLAAGLHAGDQQRLEVGTRGVDSRAVT
GGTGTEDDHSGVAEGIGHLVGLLPTSASARIKTGPPKHMGKAWKERSPRKKVGRAHFAPGSGITVPRRSRPG
TRPRPRRSPSCLSGPCANRPGRPRRVPR*

AnnotationID:5555 GeneID:5553

AnnotatorUID: danlee

Modification Date/Time: 2004-04-30 17:05:12

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

>gb|EAA20287.1| FtsK/SpoIIIE family, putative [Plasmodium yoelii yoelii]
          Length = 1063
Score =  220 bits (560), Expect = 5e-56
Identities = 132/291 (45%), Positives = 165/291 (56%), Gaps = 32/291 (10%)

Structural Features:

Genomic Context:

Comment:

ReferenceID:15413

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28243