ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5550

TrivialName: PA14_53350

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_53350

PAO1 Ortholog Locus:

Sequence Length: 2046

Protein Length: 681

Start: 4729850

Stop: 4727805

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAD27872.1|AF135822_1 (AF135822) unknown [Azospirillum brasilense] Identities = 70/219 (31%), Positives = 84/219 (38%), Gaps = 43/219 (19%)

Sequence:

TTGGCTGGCGAATCTCGAAACCTTGGCTGGAGCCCGCTAGGGAGTGGTGCCGAGCACCTCGAAGGAGCGGGT
CGAGCCGCCGATTTCGCTGATCTTCTGGGTCCAGAAGTTCTTCGCGTTGCCATAGTGCCTGATGTAGTAATG
GCCGGGCTCGGTCCCTGGTGGAATGGACCAGCTGATAGTCGCTTTCGAGGCAGATATACCCACTCTCTCCCA
GCGGTATTGGGTATACCAGTCATTATCGGTGGCAACGGTCACGGGCGTCTGTTTGCCATCCTTGCCGATATT
CACCACTTCCAGGAAAGTCTTCTCGGTGCGCAAGTCATTCTTCGGATGTCCGGTCACGAAAGCGACGGTCAC
CTTGTCGCCGATGCGATAACTTTCCCTGGGTTGTTGCAACACGTCGCCGAAGGACTTGCCGATATAGGGATC
ATCGGCCACTACTCCGGTCTGGAAGTTCATCTGGCAGCAGGACAGGTCCGGCGCTATCGCCGAGGTTTCCAC
CGGCAGGCGTTCGCGCAGCGCCACCGCCATGTCGACGAACAACTGCTGGTAGGCGGCCTGGGTCCAGGGGCC
GTAGAGGGTCGAGCCGCCTTCGTATTCCTGGGCGGCGTATTCCTCGCGGGTGGTGACGTAGCTGGCATAGGC
ATTCGCGTAGCCATTGAAGATCACATGGCGGATACCGGCCGCTTCGCTGGCCGCCTGCACCGCGCGGCGGAT
CCGCACCCCGGCCATCACGGTGAACTCGGCGGGGGCGCCGAGCAGTTCCAACTGGCCGATGCGGAACATCTG
GATCGGCAGCACCGTCGGCGTCCAGGGGTAGGGTTTCTTGTTGCCGGTGTCGGCGAGGATGGTCTTTTCCGC
CTGGCATTGCACCAGTTCCTGCGGCGGCACGCCGGTGAGCAACCCGCCAAGGGCCGAGAGGAACGGATTGTT
GCCTTCATCCAGCCCCAGCGGGCCTGGACCGTCTTCGGTGCTACCGGCGGCCAGACTGGTGCCGATGGCCGC
GGTGCACAACTGGCGCGGCTGGCCGTCGGTGAACTCCGGGCGGATCGGCAGGCGGGTGAAGTCGACGAAACG
GAAGCGCGAATCCAGTTCGCCGAGCACTTCCTCCTGGGCCTGGCCGGCGATCTCGTAGGCCTTGGCGAATTG
GCGCAGACCGATCTCGCGGGTGTTGTCGAACTCGTTGTCGAAGGGACCGGAGCCGGGCTTCAGGTTCAGGTT
GGGCGACAGGTTGCCGGCATTGGTCTGGGCGAAGGCGGCGACGAAACCGGCCCTGCGGCTGACGTCGTGCTC
CCAGTGATAGGAGGCGTAGCCCTTGTTGTCCGGCGAGATCAGATGGTTGGCGTTGGTCATCGAGGTGCTGTG
CACCGGGAACCAACTGATCGCGCCGGCCAGCTCGCCGTTGGCGTCGACGAAGCTGAGCACGCTCATCTGCGG
GTCGATGCCATCCTCGTAGCCGGCGATGTCCGGATTCTTCAGGTGCGACAGCAGCGAACGGTTGCGGCTGGC
GTTGCGCAGCTCGCCGCTGCCGTAGAACAGGCGGCCGGGCTGCAACCTGGCCTGGGCCCGCTCGATGGAGCG
GACGATGCCGTCGACGATGGCATTGAAGGTCTTTTCCTGGAAGCCGAGCACCGACAGGTTGTACATCGCGTA
GTGGGAGAAGCCGCCCGGACCGGAGTGGGTGTGGGTGGCGGCGAGCATCACGTTGTTCTCGTCGTAGACACC
GGGGTACTTCGCCTTGAGCCGGGCCAGGACCTTCAGGTGCACGGCCTGGAAGATCATCCCCAGGTCGGTGTT
GACGTAGACCAGGCGACGTCCGCTGGCCGCTTCCTCGATCACGAAGGCACGCGCCCACTGGCGCATGTGGAT
GCCGGCGGTCTTCTGTTCGAGGGAGGAGTAACCCATCATGCCGACTTCGGCGGCTTCGCCGGTGATGTCCGC
CTTGCCCAGGCCGAAGCGGTAGGGCAGGTCGTCGGCCCTGGCAGGCATGGAGAGCGCCAGCAGGACGCAGGA
CAGCAAGAGCGCGGTGAATGCGGAACGTGA

Translation:

MAGESRNLGWSPLGSGAEHLEGAGRAADFADLLGPEVLRVAIVPDVVMAGLGPWWNGPADSRFRGRYTHSLP
AVLGIPVIIGGNGHGRLFAILADIHHFQESLLGAQVILRMSGHESDGHLVADAITFPGLLQHVAEGLADIGI
IGHYSGLEVHLAAGQVRRYRRGFHRQAFAQRHRHVDEQLLVGGLGPGAVEGRAAFVFLGGVFLAGGDVAGIG
IRVAIEDHMADTGRFAGRLHRAADPHPGHHGELGGGAEQFQLADAEHLDRQHRRRPGVGFLVAGVGEDGLFR
LALHQFLRRHAGEQPAKGREERIVAFIQPQRAWTVFGATGGQTGADGRGAQLARLAVGELRADRQAGEVDET
EARIQFAEHFLLGLAGDLVGLGELAQTDLAGVVELVVEGTGAGLQVQVGRQVAGIGLGEGGDETGPAADVVL
PVIGGVALVVRRDQMVGVGHRGAVHREPTDRAGQLAVGVDEAEHAHLRVDAILVAGDVRILQVRQQRTVAAG
VAQLAAAVEQAAGLQPGLGPLDGADDAVDDGIEGLFLEAEHRQVVHRVVGEAARTGVGVGGGEHHVVLVVDT
GVLRLEPGQDLQVHGLEDHPQVGVDVDQATSAGRFLDHEGTRPLAHVDAGGLLFEGGVTHHADFGGFAGDVR
LAQAEAVGQVVGPGRHGERQQDAGQQERGECGT*

AnnotationID:5552 GeneID:5550

AnnotatorUID: danlee

Modification Date/Time: 2004-04-30 17:05:12

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15409

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28236