ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5543

TrivialName: PA14_53960

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_53960

PAO1 Ortholog Locus:

Sequence Length: 2925

Protein Length: 974

Start: 4787258

Stop: 4784334

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK22647.1| (AE005742) ISCc2, transposase, fusion [Caulobacter crescentus CB15] Identities = 178/669 (26%), Positives = 231/669 (34%), Gaps = 127/669 (18%)

Sequence:

ATGCGTCGTCGTCCTCGGCAATCGAATTCAAGGGCAGCGGCTGCGTTCGACAGCCGCTGCCGGTCGTCGGCG
GATGACGCTACGCGTCGCCCGTCCTACCAGGGTGTTTCGCCGGCGCCATCAGGCGCCGGCCGCCTCCAGGAA
GTCCTGGGCGAAGCGTTGCAGTACGCCGCCGGCTTCGTAGATGGAGACTTCCTCGTCGCTGTCCAGGCGGCA
GGTCACCGGCACTTCGAGCCGCTCCCCGTCGCGCCGGTGGATGACCAGGGTCAGGTCGGCGCGCGGCCGGCG
AGCGCCGAGCACGTCGAAGGTCTCGCTGCCGTCGATCCCCAGGGTCAGGCGGGTGGTGCCCGGCTTGAACTC
CAGCGGCAGCACGCCCATGCCGATCAGGTTGGTGCGGTGGATGCGCTCGAAGCCCTCGGCGACGATCGCCTC
CACCCCGGCCAGGCGCACGCCCTTGGCCGCCCAGTCGCGCGAAGAACCCTGCCCGTAGTCGGCGCCGGCGAC
GATGATCAGCGGCTGCTTGCGCTCCATGTAGGTCTCGATGGCTTCCCACATGCGCATCACCTTGCCTTCCGG
CTCGACCCGCGCCAGCGAACCCTGCTTCACGCTGCCGTCGGCGTTGCGCACCATCTCGTTGAACAGCTTCGG
GTTGGCGAAGGTCGCGCGTTGCGCGGTGAGGTGGTCGCCGCGGTGGGTGGCGTAGGAGTTGAAGTCCTCCTC
GGGCAGGCCCATTTTCGCCAGGTACTCGCCCGCCGCGCTGTCGGCGAGGATCGCGTTGGACGGCGACAGGTG
GTCGGTGGTGATGTTGTCCGGCAGCACCGCCAGCGGGCGCATGCCGCGCAGGGTGCGTTCGCCGGCGAGGGC
GCCTTCCCAGTACGGCGGGCGGCGGATGTAGGTGCTCGTCGGGCGCCAGGCGTAGAGCGGGTCGACCTTCTC
GCGCTCGCCGTGGGTGATGTCGAACATCGGGATGTAGACCTGGCGGAACTGCTCGGGCTTCACCGCCGCCCT
GACCACTGCGTCGATCTCCTCGTCGCTCGGCCAGAGGTCCTTCAGGCGGATCTCCTTGCCGTCCACCACGCC
GAGCACGTCGCGCTCGATGTCGAAGCGGATGGTCCCGGCGATGGCGTAGGCCACCACCAGCGGCGGCGAGGC
GAGGAAGGCCTGCTTGGCGTAGGGGTGGATGCGCCCGTCGAAGTTGCGGTTGCCGGAGAGCACCGCGGTGGC
GTACAGGTCGCGCTCGACGATCTCCTGCTGGATCGCCGGGTCGAGGGCGCCGGACATGCCGTTGCAGGACGT
GCAGGCGTAGGCCACCACGCCGAAGCCGAGGGCTTCCAGGTGCGGCAGCAGGCCGGCTTCGCGCAGGTATTC
GGTGACCACCTTGGAGCCGGGTGCCAGCGAGGTCTTCACCCATGGCTTGCGGACCAGGCCGAGGCGGTCGGC
GTTGCGCGCCAGCAGGCCGGCGGCGATCACGTTGCGCGGGTTGCTGGTGTTGGTGCAACTGGTGATCGCGGC
GATGATCACCGCGCCGTCCGGCATCAGGCCCTCGGCTTCCTCGGCGCGGGCCCGCTCGAGGTTGCCGGCGAT
GCCTTTCGCCGCCAGTTCGCTGGTGGCGACCCTGGCGTGCGGATTGGACGGGCCGGCCATGTTGCGCACCAC
GCTGGACAGGTCGAACTTCAGTACCCGCTCGTACTCGGCGTCGACCAGGCTGTCGGCCCAGAGTCCGGCGGT
GCGCGCATAGGCCTCCACCAGGGCGACCTGCTCGTCGTCGCGGCCGGTGAGGCGCAGGTAGTCGATGGTCTG
CTGGTCGATGGCGAACATCGCCGCAGTGGCGCCGTATTCCGGAGCCATGTTGGAGATGGTCGCGCGGTCGCC
GAGGGTCAGGCTGGAGGCGCCTTCGCCGTAGAACTCCAGGTAGGCGCCGACCACCTTCTGCTTGCGCAGGAA
CTCGGTCAGGGCCAGCACCACGTCGGTGGCGGTGATGCCCGGCTGGCGACGGCCGCTCAGCTCGACGCCGAC
GATGTCCGGCAGGCGCATCCAGGAGGCGCGGCCGAGCATCACGTTTTCCGCTTCCAGGCCGCCGACGCCGAT
GGCGATCACGCCCAGGGCGTCGACGTGCGGGGTATGGCTGTCGGTGCCCACGCAGGTATCGGGGAAGGCCAC
GCCGTCGCGCGCCTGGATCACCGGCGACATTTTCTCCAGGTTGATCTGGTGCATGATGCCGTTGCCCGGCGG
GATCACGTCGACGTTGCGGAAGGCCTGCTTGGTCCAGTCGATGAAGTGGAAGCGGTCCTCGTTGCGGCGGTC
CTCGATGGCGCGGTTCTTGGCGAAGGCCTCGGGGTCGTAGCCGCCGCATTCCACCGCCAGCGAGTGGTCGAC
GATCAGTTGCACCGGCACCACCGGGTTGACCTGGGCCGGGTCGCCGCCCTTGTCGGCGATGGCGTCGCGCAG
GCCGGCGAGGTCGACCAGCGCGGTCTGCCCGAGGATGTCATGGCAGACCACCCGCGCCGGGTACCAGGGGAA
GTCGAGGTCGCGCTTGCGCTCGACCAGTTGGCGCAGCGAAGCCTCCAGGGTCGCCGGGTCGCAACGGCGCAC
CAGGTTCTCGGCGAGCACGCGGGAGGTATAGGGCAGCTTGGCGTAGGCGCCGGGCTGGATCGCCTCGACCGC
CTCGCGGGCGTCGAAGTAGTCCAGGCGGGTGCCGGGGAGCGGTTTGCGGTGTGCGCTGTTCATGGCTCGGAC
TCAATCACGGGGTGTTCGGAAGCGTGTCGCTCGCGCCGTGGCGCAGCCCACGCCGGCCTTTCGAATTCTGGG
TGCGGCAACCGTCCGGCGCGCTCGCGTTCGGCGCGCCGGACGGCGTGGATCAGCGTTGCTCCAGCGGCACGA
ACGCGCGCTGCTCGACGCCGGTGTACTCGGCGCTCGGGCGGATGA

Translation:

MRRRPRQSNSRAAAAFDSRCRSSADDATRRPSYQGVSPAPSGAGRLQEVLGEALQYAAGFVDGDFLVAVQAA
GHRHFEPLPVAPVDDQGQVGARPASAEHVEGLAAVDPQGQAGGARLELQRQHAHADQVGAVDALEALGDDRL
HPGQAHALGRPVARRTLPVVGAGDDDQRLLALHVGLDGFPHAHHLAFRLDPRQRTLLHAAVGVAHHLVEQLR
VGEGRALRGEVVAAVGGVGVEVLLGQAHFRQVLARRAVGEDRVGRRQVVGGDVVRQHRQRAHAAQGAFAGEG
AFPVRRAADVGARRAPGVERVDLLALAVGDVEHRDVDLAELLGLHRRPDHCVDLLVARPEVLQADLLAVHHA
EHVALDVEADGPGDGVGHHQRRRGEEGLLGVGVDAPVEVAVAGEHRGGVQVALDDLLLDRRVEGAGHAVAGR
AGVGHHAEAEGFQVRQQAGFAQVFGDHLGAGCQRGLHPWLADQAEAVGVARQQAGGDHVARVAGVGATGDRG
DDHRAVRHQALGFLGAGPLEVAGDAFRRQFAGGDPGVRIGRAGHVAHHAGQVELQYPLVLGVDQAVGPESGG
ARIGLHQGDLLVVAAGEAQVVDGLLVDGEHRRSGAVFRSHVGDGRAVAEGQAGGAFAVELQVGADHLLLAQE
LGQGQHHVGGGDARLATAAQLDADDVRQAHPGGAAEHHVFRFQAADADGDHAQGVDVRGMAVGAHAGIGEGH
AVARLDHRRHFLQVDLVHDAVARRDHVDVAEGLLGPVDEVEAVLVAAVLDGAVLGEGLGVVAAAFHRQRVVD
DQLHRHHRVDLGRVAALVGDGVAQAGEVDQRGLPEDVMADHPRRVPGEVEVALALDQLAQRSLQGRRVATAH
QVLGEHAGGIGQLGVGAGLDRLDRLAGVEVVQAGAGERFAVCAVHGSDSITGCSEACRSRRGAAHAGLSNSG
CGNRPARSRSARRTAWISVAPAARTRAARRRCTRRSGG*

AnnotationID:5545 GeneID:5543

AnnotatorUID: danlee

Modification Date/Time: 2004-04-16 15:03:46

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:11072

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28222