ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5535

TrivialName: PA14_54160

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_54160

PAO1 Ortholog Locus:

Sequence Length: 3510

Protein Length: 1169

Start: 4802690

Stop: 4806199

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA49824.1| (X70360) carR [Azospirillum brasilense] Identities = 51/147 (34%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Sequence:

TTGTTTTTATCCGGGCCCTTGCGTGTGCAAGCAACGGGTAGCGGGCCCTTGGTTGGCAGAATGGCGCTTGTG
GCGTCACTCCGTGAGCGCTTGCCGGAGCAAGCCGGAAACGTGGGTGGCCTCAAACGAGTCCGAACAGGCCCA
CGCCTCACGATCCCTCCCCTGTCGGGCAGGGAAAATCGTCCTTTATGGTCCGTTCCGGGCACGCACCGGAAC
GGCGGTCATTTCCCTCGGCGTTCGCTGCGGCGAACCCCGGAAACCGACCCGGGCGCCAAGGCGCCCGGGAAC
GGAGTATCACTCGGCGTCGGCCAGCGACAGCAGCGACGCGTTGCCGCCCACCGCGGTGGTGTTCACCGACGT
GGTGCGCTCGCTGACGAAACGCAGCAGGTAGTTCGGCCCGCCGGCCTTGGGACCGGTGCCGGACAGCCCGTG
GCCGCCGAACGGTTGCACGCCCACCACCGCGCCGATCTGGTTGCGGTTGATGTAGAGGTTGCCGACCCGCGC
CAGCTCTTCGATGCGACGGGCGGTTTCCTCGTTGCGGCTATGGACCCCCATGGTCAGGCCGAAACCGGTGGC
GTTGATCGCCTGCACGACCTTTTCCAGGTCCTGCGCGGCATAACGCACCACGTGCAGCACCGGGCCGAAGTT
CTCTTTCTTCAGCTCGTCGATGCCGCTGATCTCGAACGCGACGGGAGCGACGAAGTGACCGTTCAGGTTGCC
CGGCACCTTGGTCTCGGCGATCAGCTTGCCGGCGGCCTTCAGCGCGGCGATGTGCTGCTCCAGGCCGGCCTT
GGCCTCGGCGTCGATCACCGGGCCGACGTCGCTGACGCGCACGTCGGTCGGGCCGACCTTCAGCTCGGCCAT
GGCGCCCTTGAGCAACTCGATCACCCGCTCGGCGATGTCCTGCTGCACGTACATCACGCGCAGCGCGGAGCA
GCGCTGGCCGGCGCTGGTGAACGCGGATTGTACCGCATCCTTGATCACCTGTTCCGGCAAAGCGGTGGAATC
GACGATCATCGCGTTCTGCCCGCCGGTCTCGGCGATCAGGGTGGCGATGGCGCCGGGCTTCTCGGCCAGTTG
GCGGTTGATGATGCGGGCGGTGTCGGTGGAGCCGGTGAAGGCCACCCCGGCGACCCGCGCGTCACGGCAGAA
CACGCCGCCGAGGGTGGCGCCGTCGCCCGGCAGCAGGGCGATAACGTCCCTCGGCAGGCCGGCTTCGAACAT
CAGTTCGACGGTGCGCGCGGCGATCAGGCTGGTCTGCTCGGCCGGCTTGGCCAGCACGGTGTTGCCGGCCAC
CAGCGCGGCGCTGATCTGGCCGAGGAAGATCGCCAGCGGGAAGTTCCACGGGCTGACGCAGGCGAAGATGCC
GCGGCCTTCGTAGAACAGCTCGTTGCGCTCGCCGGTCGGGCCGCGCAGTTCCTCGCGGACCAGGCGCTGGCG
GGCCTGCTGGGCGTAGTAGCGGCAGAAGTCGACCGCCTCGCGGATCTCGTCGATACCGTCCTGCAACGACTT
GCCGGCTTCCAGGGTGCACAGCGCCATCAGCTCGCCGCGCTGGGCTTCCAGCAGGTCGGCGAGACGTTCGAG
GATGCCGGCGCGCTCGTCCACCGGGGTGGCGCTCCAGCGCGGCCAGGCCGCCTGCAACACGTCGAGGGCCTT
GCCGGCCTGCTCGGCGGACGCGTACTGGACGCTGCCGACCAGCCTCTCCAGGTCGTACGGGCAACGCACTTC
GTGGGCCGGGCCGGAAAGTTTCTCGCCGTTGACGATCGGCGCGGCTTGCCACTGGCGGGTCAGGTGCGGCTT
GTAGGCGAGCTCCAGCTCGTTCCACTGGTTCTGGATGTTCATGTTGATGCCCTGGGAGTTTTTCCGCCCGGC
GCCGAAGATCGCCTGGGGCAGAGGGATACGGTCGTTGGCCAGCGTCTTGAACTGGCGCAGTTGGGTAACCGG
GTGCTGGATCAGCGTCTCCACCGGCACGCGCGGGTCCACCAGCTTGTGCACGAAGGAAGAGTTGGCGCCGTT
CTCCAGCAGGCGGCGGACCAGGTACGGCAGCAGGTCCTTGTGCGCGCCGACCGGGGCGTAGATGCGCACGTT
GCGGCGGTACTTCTCGATCACCGTGTCGTACAGCGCGTCGCCCATGCCGTGCAGGCGCTGGAACTCGAAGTC
GCGCTCCTCGCCGCCGGCGGCCCTGGCTTCGTCGGCCAGGGCGAGGATGGCGGTCACGGTGTGGGCGTTGTG
GCTGGCGAACTGCGGGTAGATCACCCCGCGGGTGTGCTCGCTGAGCAGGTAGCGGGCGCAGGCCAGGTAGGA
AGTGTCGGTGCCTTCCTTGCGGGTGTAGACGGGGTAGCCATCGGCGCCCTGCACCTGGCACTGCTTGATCTC
GCTGTCCCAGTAGGCACCCTTCACCAGGCGCAGCGGGATGCGTGCGCCAAGCTCGCGGCCGAGCAGGGTCAG
CCATACCAGCACCGGCAGGCAGCGCTTGGAGTAGGCCTGGATGACCAGGCCGAACTCGCCCCAGCCGGCGAT
GGCCGGGTCGCGCATCAGCTTCTCGTAGAGTTCGAGGGACAGCTCCAGGCGATCGGCTTCCTCGGCGTCGAT
GGTGATGCCGACGTTCAGCTTGCGCGCGCGCACCGCCAGTTCCAGGACGTTGGCGAACAGCTCGCTGAGCAC
CCGCTCGCGCTGCGCCACTTCGTAGCGCGGATGCAGCGCCGAGAGCTTGATCGAGATCGACGGCCGCGGCCC
CGGACCGACCTGCGGCTCGGCGCCGACAGTGTCGATGGCCTGGCGGTAGTCGGCCATGTATTTCTCGGCGTC
GGCGGCGGTCAGCGCGGCCTCGCCGAGCATGTCGAAGGAATAGGTGTAGCCCTGCTCGCGGCATGGACGACC
GTTCTTCAGCGCTTCGGAGATGGTCCGGCCAAGCACGAACTGCTTGCCCATCAGCTTCATCGCCTGATTCAT
CGCGGCGCGGATCACCGGTTCGCCAGAGCGCTGCACCAGCCGGCTGATGACGCTCGGGGCGCGGCCGTCGGT
GCGTTCGTCGATGTTCACCACCTTGCCGGTCATCACCAGGCCCCAGGCGGCGAAATTGACCAGAACGTTGTC
GCTCTGGCCGAGATGGCGCTGCCAGTCGGCGGCGGACAGCTTGTCGCGGATCAGCGCGTCGGCGGTCGCCGC
GTCAGGCACACGCAACAGCGCCTCGGCCAGACACATCAGCATCAGGCCTTCCTGGGTGTCCAGGCTGTATTG
GCGCAGGAGTGCGTCGAGGGTATCGACGGCGTTGTCCCGGCTGCGCACGGTTTCGATCAGTGCGCGGGCGTT
GCGGCGGATAGCCTCGATGCCGTCGGGACCGGGGTCGGCGAGCTGCAGCAGTTCGCCCAGGTAGGCTTCCTC
GTCGACCGCGTAGTTGGCGCTGATGACAGGGAAGAATTCGGCTGCGGACCGGGTCTGGTCCTCGCCCTGCAA
GACGTGACTGGCTTTGAACATCACGCCCTCCTCTTGTGGAGCCATTGTTATTGA

Translation:

MFLSGPLRVQATGSGPLVGRMALVASLRERLPEQAGNVGGLKRVRTGPRLTIPPLSGRENRPLWSVPGTHRN
GGHFPRRSLRRTPETDPGAKAPGNGVSLGVGQRQQRRVAAHRGGVHRRGALADETQQVVRPAGLGTGAGQPV
AAERLHAHHRADLVAVDVEVADPRQLFDATGGFLVAAMDPHGQAETGGVDRLHDLFQVLRGITHHVQHRAEV
LFLQLVDAADLERDGSDEVTVQVARHLGLGDQLAGGLQRGDVLLQAGLGLGVDHRADVADAHVGRADLQLGH
GALEQLDHPLGDVLLHVHHAQRGAALAGAGERGLYRILDHLFRQSGGIDDHRVLPAGLGDQGGDGAGLLGQL
AVDDAGGVGGAGEGHPGDPRVTAEHAAEGGAVARQQGDNVPRQAGFEHQFDGARGDQAGLLGRLGQHGVAGH
QRGADLAEEDRQREVPRADAGEDAAAFVEQLVALAGRAAQFLADQALAGLLGVVAAEVDRLADLVDTVLQRL
AGFQGAQRHQLAALGFQQVGETFEDAGALVHRGGAPARPGRLQHVEGLAGLLGGRVLDAADQPLQVVRATHF
VGRAGKFLAVDDRRGLPLAGQVRLVGELQLVPLVLDVHVDALGVFPPGAEDRLGQRDTVVGQRLELAQLGNR
VLDQRLHRHARVHQLVHEGRVGAVLQQAADQVRQQVLVRADRGVDAHVAAVLLDHRVVQRVAHAVQALELEV
ALLAAGGPGFVGQGEDGGHGVGVVAGELRVDHPAGVLAEQVAGAGQVGSVGAFLAGVDGVAIGALHLALLDL
AVPVGTLHQAQRDACAKLAAEQGQPYQHRQAALGVGLDDQAELAPAGDGRVAHQLLVEFEGQLQAIGFLGVD
GDADVQLARAHRQFQDVGEQLAEHPLALRHFVARMQRRELDRDRRPRPRTDLRLGADSVDGLAVVGHVFLGV
GGGQRGLAEHVEGIGVALLAAWTTVLQRFGDGPAKHELLAHQLHRLIHRGADHRFARALHQPADDARGAAVG
AFVDVHHLAGHHQAPGGEIDQNVVALAEMALPVGGGQLVADQRVGGRRVRHTQQRLGQTHQHQAFLGVQAVL
AQECVEGIDGVVPAAHGFDQCAGVAADSLDAVGTGVGELQQFAQVGFLVDRVVGADDREEFGCGPGLVLALQ
DVTGFEHHALLLWSHCY*

AnnotationID:5537 GeneID:5535

AnnotatorUID: danlee

Modification Date/Time: 2004-04-15 15:03:17

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15395

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28205