ViewGene

Locus Name:
GeneID:
Location:

GeneID:5530
TrivialName: PA14_54360
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_54360
PAO1 Ortholog Locus:
Sequence Length:1878
Protein Length:625
Start: 4820620
Stop: 4822497
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGTCATGGGTTCTAGCTATCCACTTTGAGCACGGCGAGGAAGGCTTCCTGGGGAATTTCCACGCTACCGAC
CTGCTTCATCCTTTTCTTACCAGCCTTCTGCTTCTCCAGCAGCTTGCGTTTACGGCTCACGTCGCCACCGTA
ACACTTGGCCAGCACGTTCTTCCTGAGCGCCTTGACCGTCGAGCGGGCGATGATCTGCCCACCGATGGCTGC
CTGGATCGCCACGTCGAACATCTGCCGCGGGATCAGTTCCTTCATTTTCTCCACCAGCTGGCGGCCCTTGTA
GGGGGCGTTGTCGCGGTGGACGATCAGGGCGAGGGCGTCGACCTTCTCGCCATTGATCAGCACGTCGAGACG
AACCAGGTTGGACGGCTCGAAACGATCGAAGCTGTAGTCCAGGGAAGCATAGCCGCGGCTGGTGGACTTGAG
GCGATCGAAGAAGTCGAGCACCACCTCGTTCATCGGCAGGTCGTAGACCACCTGCACCTGGCCGCTGAGGAA
GTGCATGTCGCGCTGCACGCCGCGCTTCTCGATGCACAGGGTGATCACGTTGCCCAGGTGGTCCTTGGGCAC
CAGGATGGTGGCGCGGCAGATCGGTTCGCGCATTTCCTGGATGGACGCCAGGTCCGGGAGCTTGGACGGGTT
ATCGACGTAGATGATCTCGCCGTTCTTCTGCACGATCTCGAAGACCACCGTGGGCGCGGTGGTGATCAGGTC
CAGGTCGTATTCGCGCTCCAGGCGCTCCTGGATGATCTCCATGTGCAGCATGCCGAGGAAGCCGCAACGGAA
GCCGAAGCCCAGGGCTTCGGAGCTTTCCGGCTCGTATTGCAGCGACGAGTCGTTGAGGGTCAGCTTCTGCAG
GGCGTCGCGGAAGTCCTCGAAATCGTCCGAGCTGACCGGGAACAGGCCCGCGTAGACCTGCGGCTTGACCCG
CTTGAAGCCCGGCAGGACCTCGACGTCCGGCGTGTTGTTAAGGGTCAGCGTATCGCCCACCGGCGCGCCGTG
GATATCCTTGATACCGGCGATGATGAAGCCCACCTCGCCCGCCTTCAGGTCGACGGTCTCGGTGTGCTTCGG
AGTGAATACCCCGACGCTGTCCACCTGGTGGACCTTGCCGGTGGACTTCACCAGGATCTTGTCGCCCTTCTT
CACCCGGCCGTTCTTCACCCGCACCAGCGAGACCACGCCGAGGTAGTTGTCGAACCAGGAGTCGATGATCAG
CGCCTGCAGCGGCGCCTCGATCTCGCCTTCCGGGGCGGGGATGGCGGTCACCAGGCGCTCCAGCACCTCCAG
CACGCCCATCCCGCTCTTGGCGCTGCAGGCCACGGCGTCGGTGGCGTCGATGCCGATGATGCTCTCGATTTC
CTCTTTCACCCGCTCCGGCTCGGCCTGGGGCAGGTCCATCTTGTTCAGCACGGGCATCACTTCCAGCCCCTG
CTCGATGGCGGTGTAGCAGTTGGCGACGGACTGCGCCTCGACGCCCTGGCCGGCGTCCACTACCAGCAGCGC
GCCCTCGCAGGCGGCCAGCGAGCGGCTGACTTCGTAGGTGAAGTCGACGTGGCCGGGGGTATCGATGAAGTT
GAGCTGGTAGGTCTTACCGTCCTGCGCCTTGTAGTGCAGGGTCACGCTGTGGGCCTTGATGGTGATCCCGCG
CTCGCGCTCCAGGTCCATGGAGTCCAGGACCTGGGCCTCCATTTCGCGATCGGAGAGACCGCCGCACATCTG
GATGAAGCGATCGGCCAGCGTCGACTTGCCATGGTCGATATGGGCAATGATGGAGAAATTGCGGATATGGCT
CAGGTCGCTCACGGCTCAACACACTCGAAAAGGGCAAGGGCGGCAATCCGCCGAAAAATAGCCGGGGAGTTT
ACCTGA
Translation:
MSWVLAIHFEHGEEGFLGNFHATDLLHPFLTSLLLLQQLAFTAHVATVTLGQHVLPERLDRRAGDDLPTDGC
LDRHVEHLPRDQFLHFLHQLAALVGGVVAVDDQGEGVDLLAIDQHVETNQVGRLETIEAVVQGSIAAAGGLE
AIEEVEHHLVHRQVVDHLHLAAEEVHVALHAALLDAQGDHVAQVVLGHQDGGAADRFAHFLDGRQVRELGRV
IDVDDLAVLLHDLEDHRGRGGDQVQVVFALQALLDDLHVQHAEEAATEAEAQGFGAFRLVLQRRVVEGQLLQ
GVAEVLEIVRADREQARVDLRLDPLEARQDLDVRRVVKGQRIAHRRAVDILDTGDDEAHLARLQVDGLGVLR
SEYPDAVHLVDLAGGLHQDLVALLHPAVLHPHQRDHAEVVVEPGVDDQRLQRRLDLAFRGGDGGHQALQHLQ
HAHPALGAAGHGVGGVDADDALDFLFHPLRLGLGQVHLVQHGHHFQPLLDGGVAVGDGLRLDALAGVHYQQR
ALAGGQRAADFVGEVDVAGGIDEVELVGLTVLRLVVQGHAVGLDGDPALALQVHGVQDLGLHFAIGETAAHL
DEAIGQRRLAMVDMGNDGEIADMAQVAHGSTHSKRARAAIRRKIAGEFT*
AnnotationID:5532GeneID:5530
AnnotatorUID: danlee
Modification Date/Time: 2004-04-14 16:04:10
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15389
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28195
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48532How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 133287Stop: 131410
Length: 1878
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGTCATGGGTTCTAGCTATCCACTTTGAGCACGGCGAGGAAGGCTTCCTGGGGAATTTCCACGCTACCGAC
CTGCTTCATCCTTTTCTTACCAGCCTTCTGCTTCTCCAGCAGCTTGCGTTTACGGCTCACGTCGCCACCGTA
ACACTTGGCCAGCACGTTCTTCCTGAGCGCCTTGACCGTCGAGCGGGCGATGATCTGCCCACCGATGGCTGC
CTGGATCGCCACGTCGAACATCTGCCGCGGGATCAGTTCCTTCATTTTCTCCACCAGCTGGCGGCCCTTGTA
GGGGGCGTTGTCGCGGTGGACGATCAGGGCGAGGGCGTCGACCTTCTCGCCATTGATCAGCACGTCGAGACG
AACCAGGTTGGACGGCTCGAAACGATCGAAGCTGTAGTCCAGGGAAGCATAGCCGCGGCTGGTGGACTTGAG
GCGATCGAAGAAGTCGAGCACCACCTCGTTCATCGGCAGGTCGTAGACCACCTGCACCTGGCCGCTGAGGAA
GTGCATGTCGCGCTGCACGCCGCGCTTCTCGATGCACAGGGTGATCACGTTGCCCAGGTGGTCCTTGGGCAC
CAGGATGGTGGCGCGGCAGATCGGTTCGCGCATTTCCTGGATGGACGCCAGGTCCGGGAGCTTGGACGGGTT
ATCGACGTAGATGATCTCGCCGTTCTTCTGCACGATCTCGAAGACCACCGTGGGCGCGGTGGTGATCAGGTC
CAGGTCGTATTCGCGCTCCAGGCGCTCCTGGATGATCTCCATGTGCAGCATGCCGAGGAAGCCGCAACGGAA
GCCGAAGCCCAGGGCTTCGGAGCTTTCCGGCTCGTATTGCAGCGACGAGTCGTTGAGGGTCAGCTTCTGCAG
GGCGTCGCGGAAGTCCTCGAAATCGTCCGAGCTGACCGGGAACAGGCCCGCGTAGACCTGCGGCTTGACCCG
CTTGAAGCCCGGCAGGACCTCGACGTCCGGCGTGTTGTTAAGGGTCAGCGTATCGCCCACCGGCGCGCCGTG
GATATCCTTGATACCGGCGATGATGAAGCCCACCTCGCCCGCCTTCAGGTCGACGGTCTCGGTGTGCTTCGG
AGTGAATACCCCGACGCTGTCCACCTGGTGGACCTTGCCGGTGGACTTCACCAGGATCTTGTCGCCCTTCTT
CACCCGGCCGTTCTTCACCCGCACCAGCGAGACCACGCCGAGGTAGTTGTCGAACCAGGAGTCGATGATCAG
CGCCTGCAGCGGCGCCTCGATCTCGCCTTCCGGGGCGGGGATGGCGGTCACCAGGCGCTCCAGCACCTCCAG
CACGCCCATCCCGCTCTTGGCGCTGCAGGCCACGGCGTCGGTGGCGTCGATGCCGATGATGCTCTCGATTTC
CTCTTTCACCCGCTCCGGCTCGGCCTGGGGCAGGTCCATCTTGTTCAGCACGGGCATCACTTCCAGCCCCTG
CTCGATGGCGGTGTAGCAGTTGGCGACGGACTGCGCCTCGACGCCCTGGCCGGCGTCCACTACCAGCAGCGC
GCCCTCGCAGGCGGCCAGCGAGCGGCTGACTTCGTAGGTGAAGTCGACGTGGCCGGGGGTATCGATGAAGTT
GAGCTGGTAGGTCTTACCGTCCTGCGCCTTGTAGTGCAGGGTCACGCTGTGGGCCTTGATGGTGATCCCGCG
CTCGCGCTCCAGGTCCATGGAGTCCAGGACCTGGGCCTCCATTTCGCGATCGGAGAGACCGCCGCACATCTG
GATGAAGCGATCGGCCAGCGTCGACTTGCCATGGTCGATATGGGCAATGATGGAGAAATTGCGGATATGGCT
CAGGTCGCTCACGGCTCAACACACTCGAAAAGGGCAAGGGCGGCAATCCGCCGAAAAATAGCCGGGGAGTTT
ACCTGA