ViewGene

Locus Name:
GeneID:
Location:

GeneID:5529
TrivialName: PA14_54380
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_54380
PAO1 Ortholog Locus:
Sequence Length:1446
Protein Length:481
Start: 4822551
Stop: 4823996
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGAAACCGCCCTTTTTTCGCCAGCCGGCTTATTCGGCCAGCTTGAAGGTGATGAAGCTGGCGCGCCCCTG
GCGCAGTACCCGCATCGAAACCGAACGGTTCTTCGGCAGGGCCTTGGCCACGTCGGCGAAGATCTTGGTCGA
GGTCACCGCCTTGTTGTCCAGGTGGGTGATGACATCGCCCGGACGCAGGCCGATGACCGCGGCCGGACCGTC
CTGGACTTCCTTGATCACCACGCCGCCCTGGATATCCAGGCTCTTGCGCTGCTCGGCGGTCAGGTCGGCGAC
GGTCACGCCCAGGCGGTTGCTGCTGCGCTCGGCGCCCGGAGCGCCCATCGAGGCGATTTCCTCGTCGTCGTC
CGGAAGGTTGCCTACCGCCATGCTCAAGGACTTGCGCTGGCCGTTGCGAATCACGTCCAGGTTGATCTTGTC
GCCCGGCTTCATGTTGCCCACCAGGTGCGGCAGGTCGGCGGACTCGTTGATCGACTGGCCGTTCAGGCTGAG
GATCACATCGCCCACCTGCAGGCCGCCCTTGGCCGCCGGACCGTCTTCCACCAGCTGCGCCACCAGCGCGCC
GGACGGCTTGTCGAGGCCGAAGGACTCGGCGAGATCCTTGTTCACTTCCTGGATCACCACACCCAGCCAGCC
GCGGCTGACCTTGCCGGCTTTCTTCAACTGGTCGGCGACGTTCAGCGCGACATCGATCGGGATGGCGAAGGA
CAGGCCCATGAAGCCGCCGGAACGGGTGAAGATCTGCGAGTTGATGCCGACCACTTCGCCCTCCAGGTTCAG
CAGCGGACCGCCGGAGTTGCCCGGGTTGATCGCCACGTCGGTCTGGATGAAGGGTACGTAGCTCTCGTTCGG
CAGGCTACGCCCCTTGGCACTGACGATACCGGCGGTGACCGAGTGATCGAAGCCGAACGGCGAACCGATGGC
CAGGACCCATTCGCCCACTTTCAGCTTGTTCGAATCGCCCAGTTTCAGGGTCGGCAGGTTCTTCGCCTCGAT
CTTCAGCACCGCCACGTCGCTGCGCGGGTCCGCGCCGACCAGCTTGGCCTTGTGCTCGCTACGGTCGGACAG
GCGCACCAGGATCTCGTCGGCATCGGCCACGACGTGATTGTTGGTGAGGATGTAGCCGTCGTTGGAGATGAT
GAAGCCGGAGCCCAGCGATTGCGCCTCGCGCTGCTGGCCGCGCGGATTGCGCGGAACCTGCGGGATGCTGCG
CTCGAGGAAGTCGCGGAACATCGGCGGCAGCCCTTCGAGGTCGGGGATCGACAGCTGCCCGCGCGCCATGGC
GCGATCCGGCAGCTTCTGCCGCGTACTGATATTCACCACCGCCGGCGACGCCTGTTCGACCAAAGGCGTGAA
GTCCGGCAGTTCTGCCCGGGCCGTCATCGCCAGGCTCAAGGCCAGCAAGGCCACCATCGCAGCCATACAGCG
TTTTAG
Translation:
METALFSPAGLFGQLEGDEAGAPLAQYPHRNRTVLRQGLGHVGEDLGRGHRLVVQVGDDIARTQADDRGRTV
LDFLDHHAALDIQALALLGGQVGDGHAQAVAAALGARSAHRGDFLVVVRKVAYRHAQGLALAVANHVQVDLV
ARLHVAHQVRQVGGLVDRLAVQAEDHIAHLQAALGRRTVFHQLRHQRAGRLVEAEGLGEILVHFLDHHTQPA
AADLAGFLQLVGDVQRDIDRDGEGQAHEAAGTGEDLRVDADHFALQVQQRTAGVARVDRHVGLDEGYVALVR
QATPLGTDDTGGDRVIEAERRTDGQDPFAHFQLVRIAQFQGRQVLRLDLQHRHVAARVRADQLGLVLATVGQ
AHQDLVGIGHDVIVGEDVAVVGDDEAGAQRLRLALLAARIARNLRDAALEEVAEHRRQPFEVGDRQLPARHG
AIRQLLPRTDIHHRRRRLFDQRREVRQFCPGRHRQAQGQQGHHRSHTAF*
AnnotationID:5531GeneID:5529
AnnotatorUID: danlee
Modification Date/Time: 2004-04-14 16:04:07
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15388
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28193
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48531How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 131356Stop: 129911
Length: 1446
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGAAACCGCCCTTTTTTCGCCAGCCGGCTTATTCGGCCAGCTTGAAGGTGATGAAGCTGGCGCGCCCCTG
GCGCAGTACCCGCATCGAAACCGAACGGTTCTTCGGCAGGGCCTTGGCCACGTCGGCGAAGATCTTGGTCGA
GGTCACCGCCTTGTTGTCCAGGTGGGTGATGACATCGCCCGGACGCAGGCCGATGACCGCGGCCGGACCGTC
CTGGACTTCCTTGATCACCACGCCGCCCTGGATATCCAGGCTCTTGCGCTGCTCGGCGGTCAGGTCGGCGAC
GGTCACGCCCAGGCGGTTGCTGCTGCGCTCGGCGCCCGGAGCGCCCATCGAGGCGATTTCCTCGTCGTCGTC
CGGAAGGTTGCCTACCGCCATGCTCAAGGACTTGCGCTGGCCGTTGCGAATCACGTCCAGGTTGATCTTGTC
GCCCGGCTTCATGTTGCCCACCAGGTGCGGCAGGTCGGCGGACTCGTTGATCGACTGGCCGTTCAGGCTGAG
GATCACATCGCCCACCTGCAGGCCGCCCTTGGCCGCCGGACCGTCTTCCACCAGCTGCGCCACCAGCGCGCC
GGACGGCTTGTCGAGGCCGAAGGACTCGGCGAGATCCTTGTTCACTTCCTGGATCACCACACCCAGCCAGCC
GCGGCTGACCTTGCCGGCTTTCTTCAACTGGTCGGCGACGTTCAGCGCGACATCGATCGGGATGGCGAAGGA
CAGGCCCATGAAGCCGCCGGAACGGGTGAAGATCTGCGAGTTGATGCCGACCACTTCGCCCTCCAGGTTCAG
CAGCGGACCGCCGGAGTTGCCCGGGTTGATCGCCACGTCGGTCTGGATGAAGGGTACGTAGCTCTCGTTCGG
CAGGCTACGCCCCTTGGCACTGACGATACCGGCGGTGACCGAGTGATCGAAGCCGAACGGCGAACCGATGGC
CAGGACCCATTCGCCCACTTTCAGCTTGTTCGAATCGCCCAGTTTCAGGGTCGGCAGGTTCTTCGCCTCGAT
CTTCAGCACCGCCACGTCGCTGCGCGGGTCCGCGCCGACCAGCTTGGCCTTGTGCTCGCTACGGTCGGACAG
GCGCACCAGGATCTCGTCGGCATCGGCCACGACGTGATTGTTGGTGAGGATGTAGCCGTCGTTGGAGATGAT
GAAGCCGGAGCCCAGCGATTGCGCCTCGCGCTGCTGGCCGCGCGGATTGCGCGGAACCTGCGGGATGCTGCG
CTCGAGGAAGTCGCGGAACATCGGCGGCAGCCCTTCGAGGTCGGGGATCGACAGCTGCCCGCGCGCCATGGC
GCGATCCGGCAGCTTCTGCCGCGTACTGATATTCACCACCGCCGGCGACGCCTGTTCGACCAAAGGCGTGAA
GTCCGGCAGTTCTGCCCGGGCCGTCATCGCCAGGCTCAAGGCCAGCAAGGCCACCATCGCAGCCATACAGCG
TTTTAG