ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5499

TrivialName: PA14_55270

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_55270

PAO1 Ortholog Locus:

Sequence Length: 1380

Protein Length: 459

Start: 4907783

Stop: 4909162

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG20155.1| (AE005093) Vng1983h [Halobacterium sp. NRC-1] Identities = 39/93 (41%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Sequence:

GTGCGCGCCGCAGTTCATTCTCGATCGGCTCGGCGTCGCTGCGCAGGCAGGCGAGACGGACGATCCAGCCGC
GTTCGTCGAGCCAGACCCGCAGGTCGATGTCGGTATTCGGCAACTGCCCCGCCGCGCGCCGCGACTCCAGGA
AGGCCAGCAGCCGCGGCGCGGTTTCGGCATCTTCGCCCAGGCGCTGCTGGACCTGTTCGCCGAGCCATGCGG
CGTAGGCGACCCAGAGCCGCTGACGTTCGTCGCGGAACCGTTCGGGCTCGCCGAACAGCCAACTGCGCAGGT
GCCGCCAGCGGCTCGCGCGCGGCCCACGCCTGGCCTCCGGGATGCCGTCCATCAGTGCAGTTCCGCCAGGGT
CTTGCCGAGCAACGCGCCGTCGATGCTCAGGGTAGCGTTGTTCACCAGGCCATCCAGGTAGGCCTTGGCGAT
CTGCTCCTGGCGTTGCGCGCGCAGGCTTTCGCGCAGGCGACCACGGACCTCGTCGAGGGTGGCGAGGCGGGC
GTCGCGACGCTCGGTCAGCTTGACCAGGTGGAAGCCGTTGGCGCCCTGGATCGGCTCGGACACCGCGCCGAC
CTTCAGCCGTTCCAGCGCCGGACGGATCGCCGGCAGCAGTTGCGCCTGCGCCAGCAACCCACCGATGTCGCC
GCCGTTGCGGGCGGTCTGCGGGTCGTCGGAATGCTTGCGCGCCAGTTCGGCGAAGTCGCCGTCCGCGGCCTG
CCGGTAGAGTTCCTGGGCGCGCTTGCGCGCTTCGGCAAGCCCGCCGGCCGCAGAGGCGGCGATGAAGATCTG
GCTGACCCGGTACAGCGCCGGTACAGCCAGTTGCGCCTTGTTCGCCTGGTAGGCGGCCTGCAGTTCGGCATC
GCTGGGGTAGTCCTCGGGCACCGTGCTCACCGACTCCAGGTAGGTACGCAGGACGATCTGCCGCGCCGCCGC
ATCGATCAGCGTCTTGACCTGCGGACGCTGTTGCCAGTCCTGGGCGCTGGCCTGTTCGTAGAGCGCCTTCTC
GGCCAGTCGCGCACGCATCCAGCGTTCCAGCGCGTCGCGGTTCTCGCTCAACTGCGCGCGGGTTTCCGCCGG
CACCTCGGCCAGCAGCGCCTTCAGTTCGTCCGGCGCCACCTGCAAGGCACCGAGGCGGGCCACCGCGGGTTC
CGCGGCGGCGCTGGCAGATGGCTTGGCAAGCGCGGCCTGAGCCTGGCCCGCGCCGCCGTCCTCGCGCTGGCC
ACAGCCGGCGAGAACGGCAAGCGCGAACGCCAGGATGCCGCAACGAAATGCCGGCCGCATCGGCTCAGGCCT
CGCCATCGACGGGTTGACCGGCATCCTGCGCCATGCCCTGCTGCTCCGCGGCCAGGCGGCTGTAGTCGCGCA
GATAGGCGATGA

Translation:

MRAAVHSRSARRRCAGRRDGRSSRVRRARPAGRCRYSATAPPRAATPGRPAAAARFRHLRPGAAGPVRRAMR
RRRPRAADVRRGTVRARRTANCAGAASGSRAAHAWPPGCRPSVQFRQGLAEQRAVDAQGSVVHQAIQVGLGD
LLLALRAQAFAQATTDLVEGGEAGVATLGQLDQVEAVGALDRLGHRADLQPFQRRTDRRQQLRLRQQPTDVA
AVAGGLRVVGMLARQFGEVAVRGLPVEFLGALARFGKPAGRRGGDEDLADPVQRRYSQLRLVRLVGGLQFGI
AGVVLGHRAHRLQVGTQDDLPRRRIDQRLDLRTLLPVLGAGLFVERLLGQSRTHPAFQRVAVLAQLRAGFRR
HLGQQRLQFVRRHLQGTEAGHRGFRGGAGRWLGKRGLSLARAAVLALATAGENGKRERQDAATKCRPHRLRP
RHRRVDRHPAPCPAAPRPGGCSRADRR*

AnnotationID:5503 GeneID:5499

AnnotatorUID: danlee

Modification Date/Time: 2004-03-11 17:05:58

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15370

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28136