ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5497

TrivialName: PA14_55350

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_55350

PAO1 Ortholog Locus:

Sequence Length: 1851

Protein Length: 616

Start: 4913223

Stop: 4915073

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA46094.1| (X64876) orfB [Bordetella pertussis] Identities = 91/308 (29%), Positives = 111/308 (36%), Gaps = 72/308 (23%)

Sequence:

ATGGCGTTCTCCTCAGGCCGGCAACGGCTGGCCGTTGCGACGATGGGCCACTTCGCTGAGCTGGCTTTCGCC
ATGCACCTCGGCGAGGCGGGTGACGAACTCGTCGACGAACACCCGCATGTCCGCGCTGACTTCCTTGTTCCG
CGTGACCAGGCGGTTGTAGCCGAACAACGCGGGGATCGCGACGAACAGGCCCATGGCCGTGGCCAGCAGGGC
GGCGGCCATGCCCGGGGCGATGGCATTGATGTTGACGTCGCCGGCCATGGCGGTGCCGAGGAACACCACCAT
GATCCCCAGCACGGTGCCGAGCAGGCCGATGTAGGGGCCGCCGGCGATGGCGTTGGACAGGCTCGACAAGCG
CGAGCCGAGCTGCTGGTTCTCCTTGGTGCGCACGCCGTCCATGGAGGCGCGGATCGCCTCGATGGTGGCCGC
GGAGACGGAAGAGGTGTCGGCGCCCTGCTCGCGGCGGGTGCGGATCTCCTTCACCGCCACCTGGTACAGGCG
CCACAGCGAGGAGTGTTGCAGGCGGGCGGCCAGCTCGCGGTCGTCGGCGAGCAGTTCCAGGCGCGTGCCGAC
CTCGGCGAAGCGCTCGCGGAACAGCCCGTTGGCGCGACTGACACGGCCGACGTTCTGGTTCTTGCGGTACAT
GATGACCCACGACTGGACCATCATCAGCGCCAGGATCGCGATGATCACCCAGGCATCCAGCGGCACTGCGTT
GAGCAGGAAGCCGAGCTTGCCGAAGCCGAAGCCGGACTGCTTCTCGTCGACCCCGTAGGCCACCAGGCGCGA
CTCGGCGCCCTGGGCGGTGGCATCGGCGAGGAGCAGCGCCGCCGGGCGGGCGATCTTCGACAGGCGCAACTC
GTCGATGGCGCCCTGGAAGGGTTGCAGGGTCGGCGCCGCGGCGCTCGCCTCACCTTCCCCGCTTGCCGCTTC
GGTGGCGACCGCAGGCGCGGCCTGGCCTTCCGCGCCGATGGCGATCGCGCCGCTGAACGCCGGCAGCGCCGC
CGCCAGGCTGGCGACTTCGCGACCGCCGAGATACAGCGCCAGCCGGGTACCGTCGGCGACCAGCGCCAGATG
CTGCCATTGCCCCTGCGCCAGGGCCTGGCTGGCGGCAGCGCGCTGACCGTTCAGCTCGACGAAGGGCGCGCC
CTGGGCCAGGCCGACCAACAGGGCGTTGCCGCCTTCGCGGCGCGACAGCAGGACCTGTTCGCCGGCCAGTTG
GTCGGGACGCACCCAGCCGCTGAAGCTGAAGGTGCCACCGGCGCTCACCGCCAGCGATGGGCTGGCCGGCAG
CAGCAGCGGCTGGCCCAGCAGTTGCGCGGAGCGACCGATGACGCCCTCCACCGGACTGCCGGCGGCGGTCTG
CGCATTGTTGGCGTAGGCGGTGGAGTCCCGCGGCGGAGTGCCCGGCGCACCGTCGAAGTGATAGACCAGGGT
GTAGTCCGGGTCGAACACCGACTGGCCGTTGCCGCTCTCCGGCGCCTTGGCGTTGCCGTAGTACATCCAGAT
GTCCTGGCGCTGGCCACCCTCCACCCGCGGCACGTCGACCCAGATCAGGGCCATGCCCATCAGCGGGTCGAA
GCTCTCGACCTGGTGGCGCAACACGGTCTTGTCGTCGGCGGCGACGAAGCGGATGTCCGAGCCGTTCTCGTT
GACCCCGTCGAAGGTGAAGTTGCCGGTATGCAGGCGCACCAGCAACGGCAGGCGACCGAGACTCTCGTTGAT
CGCCGCGCCTTGCGGGGTGGTATCGACCGAGACCTGCTTGCGGTACTGCCAGTCGTCCTGCCACCAGGCACT
GGCGCTGGCCGGGGCCAGCAGGCCCAGGCAGATCAGCGATGTCAGCAATAA

Translation:

MAFSSGRQRLAVATMGHFAELAFAMHLGEAGDELVDEHPHVRADFLVPRDQAVVAEQRGDRDEQAHGRGQQG
GGHARGDGIDVDVAGHGGAEEHHHDPQHGAEQADVGAAGDGVGQARQARAELLVLLGAHAVHGGADRLDGGR
GDGRGVGALLAAGADLLHRHLVQAPQRGVLQAGGQLAVVGEQFQARADLGEALAEQPVGATDTADVLVLAVH
DDPRLDHHQRQDRDDHPGIQRHCVEQEAELAEAEAGLLLVDPVGHQARLGALGGGIGEEQRRRAGDLRQAQL
VDGALEGLQGRRRGARLTFPACRFGGDRRRGLAFRADGDRAAERRQRRRQAGDFATAEIQRQPGTVGDQRQM
LPLPLRQGLAGGSALTVQLDEGRALGQADQQGVAAFAARQQDLFAGQLVGTHPAAEAEGATGAHRQRWAGRQ
QQRLAQQLRGATDDALHRTAGGGLRIVGVGGGVPRRSARRTVEVIDQGVVRVEHRLAVAALRRLGVAVVHPD
VLALATLHPRHVDPDQGHAHQRVEALDLVAQHGLVVGGDEADVRAVLVDPVEGEVAGMQAHQQRQATETLVD
RRALRGGIDRDLLAVLPVVLPPGTGAGRGQQAQADQRCQQ*

AnnotationID:5501 GeneID:5497

AnnotatorUID: danlee

Modification Date/Time: 2004-03-11 16:04:03

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

No significant homologies detected.

Structural Features:

Genomic Context:

Comment:

ReferenceID:10989

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28132