ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5495

TrivialName: PA14_55420

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_55420

PAO1 Ortholog Locus:

Sequence Length: 1371

Protein Length: 456

Start: 4932309

Stop: 4933679

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAP55502.1| (AY298956) hypothetical protein [Leifsonia xyli subsp. xyli] Identities = 43/131 (32%), Positives = 57/131 (43%), Gaps = 5/131 (3%)

Sequence:

TTGTTCAGGCACGGACTACTGGACCAGCTGGTTCATCTCGATGATCGGCATCAGCACCGCCATCACGATGGT
CAGCACCACCCCGCCCATGACCACGATCATCAGCGGCTCGAGCAGCGCGGTCATGCCCATGGCGCGGCGCTC
GATGTCGCGCGACAGGGTCTGCGCCGCGCGGTCGAGCATCGGCGGCAGCGCGCCGGTCTTCTCGCCGCTGGC
GATCAGGTGGGTGAGGATCGGCGGGAATACCTGCCGCGTGCGCAGCGCCGAGGCCAGCGAGACACCTTCGCG
AACCTGCGCGGTGGCCTCCTCCACCGCCTGCGCGAGGCAGTCGTTGGCCAGCGTCTGGCGCGCCGCATCGAG
CGCGCGCAGCAGCGGTACGCCGGCGCTGCCGAGGATCGCCAGGGTGGAGGCGAAGCGCGCGGTATTCACCCC
GAGCACGAAGCGTCCGAGCAGAGGCAGGCGCAGCACTCGCCGGTGCCAGCCGAGCCGCGCCTGCGGGTCGCG
CAGGTACAAGCGCCAGCCCCAGTAAGCGCCACCGATGGCGCCGGCGCAGAGCCAGCCCCAGGCGCGCACGAA
GTCGCTGGCCTGGAGCATCGCCCGGGTCAGCGCTGGCAGGTCCTGGCGCGCCTGGGAGAAGGCGCTGACCAC
CTGCGGCACCACGTAGCCGAGGAGGAAGATGACGATGCCGATGGAGACCACGCCGACCACCGCCGGGTAGAT
GAACGCGGTGAGGATCTTGCCGCGCAGGGCGTTGCGTTCCTCGATGTAGTCGGCCAGGCGCTCCATCACCTG
GGCCAGGTCGCCGGACTCCTCGCCCGCAGCCACCAGCGCCCGGTAGATTTCCGGGAAGTCCCGCGGCCGTGC
GGCAAGGGCGTCGGCCAGGCGCATGCCGCCGCGCACGTCGCTGCGCACGGCGCTCAGGGTCTGGGCGATGTG
CTTGCGCTCGGCCTGGTCGAGGGTGGCGCTCAGCGCCGCCTCCAGCGGCAGGCTGGCGGCCAGCAGGCTGGC
CAGTTGGCGGGTGGCCCAGGCCAGGTCGCCGTCGGACAGGCGCGGGGCGAACAGCGCTCCCGCCCCTTGCCC
GGTCCCGCCGCCAGCCTGTTCGCGGACCTCCAGCGGGGTCAGGCCGCGGGCGCGCAGTTGGCCAAGGGCGCC
ACGCTGGCTGTCCGCCTCCAGGGTGCCGGTCTCGATCCGGCCCTGGGCGTCGGCGGCTTCGTAGCGGAAGGT
CTGCATCAGGCGTCCCGGGTCACGCGGAGGATTTCCTCCAGGGTGGTGGAGCCGCTGGCGATCCAGCGCTCG
CCGTCCTCGCGCATGCTGCGCATGCCGGCGGCGCGGGCGGCTTCGCGGAGATCCTGCTCGGCGCGGCCCTGG
TGA

Translation:

MFRHGLLDQLVHLDDRHQHRHHDGQHHPAHDHDHQRLEQRGHAHGAALDVARQGLRRAVEHRRQRAGLLAAG
DQVGEDRREYLPRAQRRGQRDTFANLRGGLLHRLREAVVGQRLARRIERAQQRYAGAAEDRQGGGEARGIHP
EHEASEQRQAQHSPVPAEPRLRVAQVQAPAPVSATDGAGAEPAPGAHEVAGLEHRPGQRWQVLARLGEGADH
LRHHVAEEEDDDADGDHADHRRVDERGEDLAAQGVAFLDVVGQALHHLGQVAGLLARSHQRPVDFREVPRPC
GKGVGQAHAAAHVAAHGAQGLGDVLALGLVEGGAQRRLQRQAGGQQAGQLAGGPGQVAVGQARGEQRSRPLP
GPAASLFADLQRGQAAGAQLAKGATLAVRLQGAGLDPALGVGGFVAEGLHQASRVTRRISSRVVEPLAIQRS
PSSRMLRMPAARAASRRSCSARPW*

AnnotationID:5499 GeneID:5495

AnnotatorUID: diggins

Modification Date/Time: 2006-02-08 22:10:08

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15368

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28128